Nothobranchius furzeri (turquoise killifish): 107384956
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Entry
107384956 CDS
T05163
Name
(RefSeq) protein VPRBP-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nfu01001
]
107384956
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107384956
Enzymes [BR:
nfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107384956
Protein kinases [BR:
nfu01001
]
Serine/threonine kinases: Other
Other
107384956
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107384956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML_2
WD40
LisH
ANAPC4_WD40
EIF3I
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Death
Motif
Other DBs
NCBI-GeneID:
107384956
NCBI-ProteinID:
XP_015813977
UniProt:
A0A8C6LCA4
LinkDB
All DBs
Position
sgr10:complement(18144453..18167052)
Genome browser
AA seq
1583 aa
AA seq
DB search
MFSPGDQLSASASAVLSSALTAAVSAAMAIATAVDAKADLAKLLDEWEEAQQGTTDQLVS
ILTKISELIERETGEYHKADPDPFDDRHPGRADPDCMLGQLLKMLFMNDDFTNALLDSYI
MNSRELRLNTAACRLLQNIMPGLDAAVVFEEKEGLVEKLFSWAREAERPLCVYATGLLAR
AMSNQEVAVSYREHNTQLVSVVIKRLCELQVSETSGHFSSSQMNQNLPQDSQGESAQTSS
PTTNKTEGKRVDEEETRMEKEESSSSTATAKPPSLRNGGCSHTSTRLLPDLVYQASPDTA
SREMENADGGEEGGGVKKRNGRKAKQKLDLTSSSKRSEQEEEEAGMVGTSEQQTNSSSWS
EMSLMLIGSDYCLSPLSPAMEQRLILQYLAPLGDYQELLAVFMKLDVRSLLMNYIDLRKT
KNVQLTFDALLFLAALLLHKKFAADFIAHGGVQKLLEIPRPSMAATGVSLCLYYLAYNQD
AMERVCVLPDGVLSDMVSYALWLLESSHSSGICHATMFFSISFSFRVVLQLFDQQDGLRR
LVNLISTLEILNPENEVSMMNDDQVFSGRQTAKHTCMALRRYFEAHLAVKTEQVKQSLHS
SDSGTVVALQPFYKAYTYTREQIIEMMEFLMECGLPQLYWEPVEVFYKLSCVPLILQLIS
TACDWKTYYGRSDTVRYALDIVAILAVVPKIQLVLADTVDVLDENRSLVSTVGMSIILGV
AEGEVFVNDAEIQKSALQVIINCVCAPDQSMNAVGAFAVAPLRQPLHHQQPPTTHNRVLA
HMWHVVQNNNGIKVLLSLLSVKMPITDADLIRALACRALVGLSRSSAIRQIISKLPLFTS
GHIQQLMKEPVLQDKRSEHVRFCRYAAELTERVSGKPLLMGTDVSLARLQKASVVAQSRI
TFSEKELLMLIRNHLVAKGLHDTANTLVKEANLPVASHCPNSASSCVTPPPSSSLPRTCR
LAGGITARIAGHVGTSPVSSGALAASRSLVIPQSAGSLASTSANSTPPSGLGSHFAGRIL
FSRERLVANSNSGKKPCALKQKSDHGAFIQTPAMKKQLERHLPSPPTLDGIITEYLREQH
ARCPNPVTTCPPFSLFTPHRCPEPKQRRQASPNFTARLGSRVLHPKYGGVDRACLDRHLI
FSRFRPMSVFHESGGGESSFTCCAFSACERFLMLATCSGHVKLHNVFSGDEEASYTCHTS
AITHLEPSRDGKLFLTSASWSVPLSALWSMDGVFSLKNSFVDDHYVEFSKLTQDRVIGTK
DQIAHIYDIQTGQKTLTLNDPALANNYKRNCATFNPSDDLVLNDGVLWDVRVARAIHKFD
KFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCQVVFNRNGTIMYGAMLQAD
DEDDVMDQQMKSPFGSSFRTFDATDYKPIATVDVKRNIFDLCTDTKDFYLAVIESQDAVS
LDTVCRLYEVGRQKLVEEGDDDQDEEDQDDDDHSSDTDDDDDDDDDDVIDIDPLIEELAN
IEERERENEEQDPRERPTSPSGQELLGLLGSSSSDDNSNNNDDVESDDSDPEISDANPDF
LEVSDDDDEDSEMSQSIPDRWFS
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgttctccccaggtgaccagctttcagccagcgcgtccgctgtcctgtcttctgcactg
acagctgctgtgtcggctgccatggcgatcgccacggcggtggatgccaaggctgatctc
gctaaactgctagacgagtgggaagaagcgcagcagggcaccacagatcaactggtgtcc
atcttgaccaaaatatctgagctgattgaacgggagacaggagaatatcataaagcagac
ccagatccgtttgatgatcgtcatccaggacgagcggatccagactgtatgcttggacaa
ctgctgaagatgctctttatgaatgatgacttcactaatgcgcttttggactcgtatata
atgaacagtcgagagctgagactcaacacagcggcatgtcgcctccttcagaacatcatg
ccgggtcttgatgccgctgttgtctttgaggagaaggaaggtctagtagagaagttgttc
agctgggcccgtgaagccgagcggccgctgtgcgtctatgccacaggtctgctggccaga
gccatgagcaaccaggaagtggccgtaagctacagagagcacaacactcagctggtatct
gtcgtaattaagcgtctgtgtgaactacaagtctcagagacatcaggtcactttagttcc
tcccagatgaatcagaatctacctcaagactctcagggtgaatcagctcagacctcaagt
ccaaccacaaacaagacagaggggaaacgcgtggatgaggaggaaacaaggatggagaaa
gaagagagcagcagctcaaccgctactgccaaacccccatctctgagaaatggtggctgc
agccacacctccacccgcctgcttccagacttggtttaccaagcaagtcccgatacagcc
tcaagggaaatggagaacgctgatggaggagaagaaggagggggagtaaagaaacggaac
gggagaaaggctaaacagaagcttgatttgacctcctcctccaagaggagcgagcaggaa
gaggaggaggcggggatggttggcaccagcgaacagcagaccaacagctcctcctggtcc
gagatgagtctgatgttaatcggttctgactactgcctttcaccgctgagcccggccatg
gagcagaggctcatcttgcagtatctggctccccttggagattaccaggagttgcttgct
gtgttcatgaaactggacgtccgatcgctgctgatgaactacatcgacctcaggaagact
aaaaacgtccagctcacctttgatgcccttctgtttctcgctgcgctcctccttcataaa
aagtttgctgctgatttcattgctcatggaggtgtgcagaaacttctggagatcccgagg
ccttccatggcagcaacaggagtttctctctgcctctactacctggcctacaatcaggat
gcaatggagagggtgtgcgtgctacccgatggcgtgctgtcagatatggtgtcctacgcc
ctgtggttgttggagtcgtcccactcttcaggcatctgccacgccaccatgtttttctcc
atttctttttcgttcagggtggtgctgcagcttttcgaccagcaggatggtctgcgaaga
cttgtgaatctgatcagtactctggagatcctcaacccagaaaacgaggtgtccatgatg
aacgacgaccaggtgttctccggccgacagacggccaagcacacctgcatggcgctgcgc
aggtactttgaggctcacctggcagtaaaaactgaacaggtgaaacagtccctgcatagt
tcagactctggcaccgttgttgccctgcagcctttttacaaggcctacacctacaccaga
gagcagataatagagatgatggagtttcttatggagtgtggacttcctcagctctactgg
gaaccagtggaagttttctacaagctgtcatgtgttcctttaatccttcagctcatctcc
acagcctgcgactggaagacctactatggcaggagcgacacggttcgctatgctctggac
attgtggcgattcttgctgtggttcctaagatccagttggtgctggctgataccgttgat
gtgttagatgaaaacaggtcacttgtttccactgtaggtatgagcatcattctgggagtt
gctgagggcgaagtgtttgtcaacgatgctgagattcagaagtctgctcttcaagtgata
ataaactgtgtgtgcgctccagaccagagcatgaacgctgtgggggcttttgctgttgcc
cccctcaggcagcctctgcaccaccagcagccccccaccacccacaaccgtgtgctggcc
cacatgtggcatgtagtgcagaacaataatggtataaaggtgcttctgtctctgctgtcg
gtgaagatgcccatcacagatgcggacctgatccgggcgctggcctgcagagctctggtc
ggactctctcgcagctctgccatcagacagatcatcagcaagttaccgctttttaccagc
ggtcacatccagcagctgatgaaggagcctgtgctgcaggacaaacgaagtgaacatgtc
cgtttttgtcgctatgccgctgagctgacggaaagagtgtccggcaagccactcctcatg
ggcaccgatgtctcgctcgcccgtcttcagaaggccagcgtggttgcccagtcccgcatc
accttctctgagaaagagctcctcatgttgatcaggaaccacctggtggccaaaggattg
catgacacggcgaatacccttgttaaagaggcaaatttacccgtagcatcccactgtccc
aactcggcctcctcctgtgtcacccctcccccctcttcctcattacctaggacttgtcgg
ttagccggcgggatcacggcgcgcattgccggccatgttggaacctcccctgtgtcctca
ggtgctttagccgcttctcgatcgctggtcattcctcagtcagcaggctctctggcgtct
acctcagccaactccactcctccttccggactgggatcacatttcgcaggccggattctg
ttctcacgggaacgcctggtggcaaacagcaactcggggaagaaaccttgtgcgctaaaa
caaaaatctgaccacggtgctttcatacagactccagctatgaaaaaacagctggagcgc
caccttccctctccaccgaccctagacggcatcatcacagagtacctgagggagcaacat
gcccgctgccccaatcctgtcactacctgcccccccttctctcttttcaccccccaccgc
tgcccagagcctaaacagaggcgacaggcttcgcccaatttcaccgcccgccttggaagc
cgggttttgcaccctaaatatggaggtgtggaccgggcgtgtctggatcgacatctgata
ttcagcaggtttcgtcccatgtcggtgttccatgagtcaggtggaggcgagagcagtttt
acctgttgtgccttttcagcttgtgagcgtttcctgatgctggccacctgctcgggtcac
gtcaagctccacaacgtcttctctggggacgaggaggccagctacacctgccacacgtcc
gccatcacacacctggagccctccagggatggtaagttgtttcttacctctgcttcctgg
agcgtccccctgtcagctctctggagtatggatggtgtctttagcttaaagaactccttt
gtagacgatcattatgttgagtttagtaaactcactcaggacagagtcatcggcaccaag
gaccaaatcgcacacatctacgacatccagacaggtcagaagacgctgaccctgaacgac
cctgctctggccaacaattacaagaggaactgtgccacctttaaccccagcgacgacctg
gtgctgaatgacggggttctgtgggacgtgcgggtggcacgggccatccataagtttgac
aagttcaacatgaacatcagtggtgttttccatcctaatggcctggaggtcatcattaac
acagagatctgggatctgagaactttccatctcctgcacaccgttcctgctctggatcag
tgccaggtggtcttcaacagaaacggcaccatcatgtatggagccatgctgcaagctgac
gatgaggatgatgtgatggaccagcagatgaagagtccctttgggtcgtccttcagaacc
tttgatgccacagactacaagccgatcgctacagtggatgtgaagaggaacatctttgat
ctgtgcacggataccaaggacttctacctggctgttatagagagccaggatgcagtgagc
ttggacacagtctgccgtctttatgaagtgggccgacagaagctggtcgaggaaggagat
gatgatcaggatgaagaagatcaggatgatgatgaccattcctcagacacggacgatgat
gatgatgatgacgatgatgatgtcatcgatatagaccctctcatagaggaacttgcaaat
attgaagagcgggaacgggaaaacgaagagcaggatcctcgggagcgacccacctcacct
tcaggccaagagcttttgggtcttctcggaagcagcagcagcgatgataacagtaacaat
aatgatgatgttgaatctgatgattcagacccagagatatccgatgcaaacccagatttt
cttgaagtatctgatgacgatgatgaagactctgagatgtctcagtccatccctgacagg
tggttctcatga
DBGET
integrated database retrieval system
