Nothobranchius furzeri (turquoise killifish): 107384967
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Entry
107384967 CDS
T05163
Symbol
rbl1
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04110
Cell cycle
nfu04218
Cellular senescence
nfu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107384967 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107384967 (rbl1)
04218 Cellular senescence
107384967 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107384967 (rbl1)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
107384967 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
107384967
NCBI-ProteinID:
XP_015813992
UniProt:
A0A1A8U797
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Position
sgr10:18753243..18769587
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AA seq
1060 aa
AA seq
DB search
MRGDESSDSESGRMEESSVRRSLETLCQELNMDEQTATEAMDNFTAIWNTYTLEGDVVHW
LACSLYAACRKGSIPTVGKGLMEGNCVSLTRILRCSKLSLIQFFSKMRKWTDMSNLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFMDLFQNPQGCDPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNTLLCANRKDLINPVFRGLPPSFRAE
SHVSRGEPPPCVLEKLCELHDGLVVEAKGIKQHYFKPFVQKLFQKQILKGNKDLLTEMLD
PQNFIDNNKALNREYEEYVLTVGDFDERVFLGADADEEIGTPRKIVQECTASQTVAQNQL
QQHVEKSSSLAPSTPLTGRVYLKEKDLLVTPVSLATQSVSRLQSMVAGLRTSPSENLVQI
FKSCSRDPTESLLAQVKTLGQTFKEHYTKDSEDTPGSHIDFAENRLKLAKILYYKVLENV
LVQETKRLQGRDMSVLLEQDIFHCSMMACCLEVVLFSYSSQRTFPWIINIFKLAPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLESRAWVSDSALWSALEAAGNKVPTVEEVNFSS
CLDSGSGSTNGQSHLPLVAHSPIIHPRIREFRSGLGSARKEVPPSPLSVHDRYSSPAAGS
AKRRLFGDDAPGPSVSLNTRMSPLPSPAKRLTFGSSSTLKSGGQGAPTTILSIPLQGVSS
DRTITLIPVQPCDSSGVVTAQFLLTASPSRNFTAASTSDPQMGNGRPRCTGSIALFFRKV
YHLASVRLRDLCLKLEISSELRGKIWTCFEHALVHCTELMKDRHLDQLLLCSIYIISKIT
KETHTFQDIMKCYRSQPQASSHVYRSVLLRRTPKAQPADENMEVDAVSGGESAEKTSQAG
GDTNSSQSQEEERGDLIQFYNTTFILKMKSFALRYATNDNRADAPPLSPFPSVRAQPLSP
RRVSQRHSLYVSPHKNSSGCLTPSSFTYRINSSPSKDLSDINRMIRQGCVNRKRAFNMEG
DVMMSPMCDSPSKRACPENGSSPDVLLKRLQDVVSERQSH
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgcggggtgacgagtcgtcggactccgagtcgggcaggatggaggaaagttcagtccga
aggagtttggagacattgtgtcaggagctgaacatggacgaacagaccgctactgaagct
atggacaacttcacagccatatggaacacatacactctggagggggatgtggtccactgg
ctggcctgctcgctgtacgctgcctgcaggaaggggtccattcccactgtgggaaaaggg
ctgatggagggaaactgtgtctcgctcaccaggatccttcgctgctccaaactcagtctg
atccagttcttctcaaagatgaggaagtggaccgacatgtccaacctctcgcaggacttc
aggctgcgaatggaccgactggagcgaaactttgaggtttccactgtgatctttcgcaag
tttgagcccatcttcatggacttgtttcagaatccacagggatgtgatccgccacgtcag
ccgcgcagcaggaagcacaggcgactgccctgccacatcagtgatgtgttcaagttctgc
tggaccctgtttgtctacactaaaggtaactttcgtatgatcggagacgacctggtgaac
tcgtaccacctgctgctgtgctgcctggacttggtgtttggtaacactcttctgtgtgca
aacagaaaggatctcatcaaccccgtgttcagaggtttgcccccctcttttcgtgccgag
agccacgtttctcgaggcgagcctcctccttgtgtgttggagaagttgtgtgagctgcat
gatgggctggtggtggaggccaaaggcatcaagcagcactacttcaaaccgttcgtgcag
aaactgttccagaaacagattttgaaaggaaacaaggaccttctgactgaaatgttagat
cctcagaacttcatagacaacaacaaggccctgaacagggagtacgaggagtatgtgctg
acggtgggagattttgatgagcgtgtgttcctgggagcggatgctgatgaggaaatcgga
acgccgaggaagattgttcaggaatgcactgcaagccaaacggttgctcagaaccagctg
caacaacacgtggagaagtccagctctctggccccgtccacccctctgaccgggcgggtc
tacctgaaggagaaggacctgctcgtaactcctgtctccttggccacgcagagcgtcagc
cggctgcagagcatggtggccggtttaagaacgtcccccagtgagaacctggtccagatc
ttcaagtcctgctccagagatcccactgagtccttactggctcaggtgaaaactctcgga
caaacctttaaagagcattataccaaagattctgaggacacaccgggctctcatatagac
tttgcagaaaaccgtttgaagctggcaaaaatcctgtactacaaggttctggagaacgtt
ctggttcaggagaccaaacggctgcagggcagagacatgagcgttttgctggaacaggac
atcttccactgctccatgatggcatgttgtttggaggtggtgctgttctcctacagctcc
caaaggacgttcccctggatcatcaacatcttcaaactggccccattttacttttttaag
gtgattgaggtgtttattcgctcagaggagggcctatccagagacatggtcaagcatctg
aactccattgaggagcaggttctggaaagcagagcgtgggtgtcagattctgctctatgg
agtgccctggaggctgctgggaacaaagtccccaccgtggaggaggtgaacttttcctcc
tgtctcgactcgggttctggttccaccaatggtcagtctcacctacctctggtggctcac
tcccccatcatccacccacgcatcagggagttcagatcaggcctggggagtgcacgtaaa
gaagtccctccttctccactgtcagtccatgaccggtacagctctcctgcagccggcagt
gccaagcggcgactttttggcgatgacgctccaggaccttcagtcagcctgaacaccaga
atgagccctctgccttctccggcaaaaaggctgaccttcgggtcgagcagcaccctgaag
agcggaggtcagggagccccgaccaccatcctgagcatcccactgcaaggcgtgagcagc
gaccgtaccattacactgatcccagtccagccgtgtgactcttctggcgtcgtcacagct
cagtttctgctgaccgcctctccgagccggaacttcactgctgcctcgacctctgaccct
cagatggggaacgggcggcctcgatgcaccgggtcaatcgctctgttcttcaggaaggtg
tatcacctggccagtgtacgcctgagggatttgtgcctgaagttggaaatctcctcagag
ctgcgaggaaaaatctggacatgttttgagcacgcgctggttcactgcactgagctgatg
aaggatcgacatctcgaccagctgctgctgtgcagcatttatataatatccaaaatcacc
aaagagactcacaccttccaggacatcatgaagtgttaccgcagccagccccaagccagc
agccatgtttaccgcagcgtcttgttacggcggactcccaaagcgcagccagctgacgag
aacatggaggtggatgctgtgtcgggtggagaatctgcagagaaaaccagtcaggctgga
ggtgacaccaactccagccaatcacaagaggaggaacgcggtgacctcattcagttttat
aacaccactttcatcctgaagatgaagagcttcgctctgagatacgccaccaacgataat
cgggcagacgctcctcctctgtctccgttcccgtcggtccgagctcagcctctgtctcct
cgccgagtcagtcagagacactcgctgtacgtgtcccctcacaagaattcctctggttgt
ctcacaccgagctccttcacctacaggatcaacagcagcccctccaaggacctgtcagac
attaaccggatgatccgacagggatgtgtgaacaggaaaagggcgttcaacatggaaggg
gatgtgatgatgtcaccaatgtgcgactcgcccagtaagcgggcgtgtccggagaacggc
agcagtccagacgttctgctgaagcgtctgcaggacgtcgtgtccgagcggcagagtcac
tga
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