Nothobranchius furzeri (turquoise killifish): 107385112
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Entry
107385112 CDS
T05163
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107385112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107385112
Cell adhesion molecules [BR:
nfu04515
]
Cadherins
Major cadherins
107385112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
107385112
NCBI-ProteinID:
XP_015814245
LinkDB
All DBs
Position
sgr10:24543714..24889506
Genome browser
AA seq
928 aa
AA seq
DB search
MKVRLLVQLVCTLLVGASSGSRTGQLQKACRPGFSQNFYTVIVSRDKLHGQGILKDTTLS
SECVKFEDCQRSREVGFVSSDPKFSVRPDGTVYAEQEVANLSEPVQFMLTARGLHDPHIW
ETTVKLALAGHLHPLPLTKISFEEMLSRVWDPQPRVIKFSRRHQRGSSANGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKNDGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREEKASFHLRAHAVDMNGNQVENPVDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKP
GSSVMQVTATDSDDSTTANGMVRYRILSQIPETPISNMFTINSETGDIVTVAAGLDREKV
SQYTVIVQATDMEGNNNFGLSNTATALICITDINDNPPELTVRTFSGEVPENKVNVVVTN
LTVVDKDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFEMNRAFMLTV
VVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKMIRFEEGVPAGTTLTVFSAQ
DPDHFIQQTVRYSKLSDPANWLKINRTNGQITTMALLDRESMYVKNNMYEATFLAFDNGK
SGSPQASGTGTLQIYLIDVNDNAPVLIPREAQICEHSRPNSKINITASDTDADPNVGPFV
FELPTFPASIRRNWTISRLNGDYAQLRLRISYLEAGVYEIPVIVSDSGNPPLSNRSTIRI
KVCPCDNNGDCSATGAVAAAGLGTGAIIAILICIIILLSIVLLFVVWMKRREKERQAKPL
LIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIITKPTGVRRVDERPVVAES
QYPVRSNLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSS
GQQDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtccgcttgctggtccagttggtgtgcaccttacttgtgggcgcatcctcgggg
agtaggacaggccagctccagaaagcttgcagacctggcttttcccagaacttctacacg
gtgattgtctcaagagacaagctgcacggtcagggcatcctcaaagacaccaccctgtcc
agcgagtgtgtgaagtttgaggattgccagcgcagcagagaggtgggctttgtcagcagc
gatccaaagttcagcgtgaggcctgatgggacggtgtatgctgaacaggaagtggccaac
ctttcagagcccgtccagttcatgcttacagcgagggggctgcacgatccccacatctgg
gagaccaccgttaagctggctcttgctggacaccttcatcctctaccactcacaaagatc
agcttcgaggaaatgctgtcaagagtgtgggacccccaacccagggttatcaagttttct
cgaagacatcagagaggctcctctgccaatgggctgaggcgacagaagagagactgggtc
atccctcccatcaatgtccctgaaaactcccgaggacccttcccccacatgcttgtcaga
atccgctcagatcaggataagaatgatggcatccgctacagcatcaccggagcaggtgcc
gatcagccgccgagtggaatctacaacatagatcccatcagcggcaacatgtttgtcacc
cagcccctggacagggaggagaaagcctccttccacctgcgtgctcatgcagtggacatg
aatgggaaccaggtggagaacccagttgatctgtacatctacgtgattgacatgaacgac
aacaggcctgagtttcagaaccaggtttataacggctctgtggccgaaggctccaaaccc
ggttcttctgtgatgcaggtgacagcaacagactctgacgattccaccaccgctaacggc
atggtgcgctaccgcatcctgtctcagatccccgagactccgatctccaacatgttcacc
atcaacagcgagactggagacatcgttacggtggctgccggcctggaccgagagaaagtg
tcccagtacactgttattgtccaggctactgacatggagggaaacaataactttggactc
tccaacacagccactgctctaatttgtatcaccgacatcaacgacaatcctccagaactc
acagtcagaacgttttctggggaagttccagagaacaaggtgaacgtggtggtcaccaac
ctgacggtggtggacaaggatcagccccacagccccaactggaacgccgtctatcgtata
gtcagcggagacccctccggacatttcaccatccgcaccaatcccatcaccaatgaggga
atgttgacagtggtcaagccagtggactttgagatgaatcgtgctttcatgctgacggtg
gtggtgtccaaccaggcccacctggcaagtggcatccagtcctctcttcagtccacggca
ggagtcaccatctcggttcaagatgtgaacgagccacccgtcttccccgtcaaccctaag
atgattcgttttgaggagggcgtgccagcagggacaactcttacggtgttttctgcccaa
gacccggaccacttcatccagcagactgtcaggtactcaaagctatctgacccagctaac
tggctgaagatcaacaggaccaatggtcagatcaccactatggccctgctggacagagag
tccatgtatgtcaaaaacaacatgtatgaagccacattcttggcattcgacaatggtaag
tctggttctcctcaagccagtgggacaggaacgctccagatttacctgatcgacgtgaac
gacaatgcaccagtgcttattccccgcgaggcccaaatctgtgagcactcgcgtcccaac
tcgaagatcaacatcaccgcttcggacactgacgccgacccaaacgttggaccctttgtc
tttgagctgcctacttttcccgccagcatccgtcgcaactggaccatctccagactgaac
ggcgactatgctcagctgagactaaggatttcttacctggaggcaggtgtgtatgagatc
cccgtcatagtgtcagactcgggaaacccccctctgtccaaccgctctacaatcagaatt
aaagtgtgtccctgtgataacaatggggactgcagtgccacgggagctgtggcggctgcc
ggtcttggcaccggggccatcatcgcgatactcatctgcataattatactgctaagtata
gttctgctgttcgtggtgtggatgaagcgcagagagaaggagcggcaggcaaagcctctg
ctcatcgatcctgaagatgacgtcagggacaacatcctcaagtacgacgaggaaggtgga
ggagaggaggaccaggactacgacttgagccagctgcagcagccggagtctctggaccac
atcatcactaagccaactggggtgcgcagggtggatgagaggcctgtggtggctgagtcg
cagtaccctgtcagatccaatctgccccacccaggagacataggagatttcataaatgat
ggtctgagagcagctgacaacgaccccactgctcctccttatgactccctgctggtgttt
gactacgagggcagtggttcaaccgctggctcagtgagttcgctcaactccagcagctca
ggacagcaggactacgactacctcaacgactggggccctcgcttcaagaagctggcagat
ctctacgggggaggagacgatgactga
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