Nothobranchius furzeri (turquoise killifish): 107385115
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Entry
107385115 CDS
T05163
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04260
Cardiac muscle contraction
nfu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107385115
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107385115
04261 Adrenergic signaling in cardiomyocytes
107385115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107385115
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107385115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
dCache_1
VWA_3
VWA_2
VWA_CoxE
dCache_2
WAK_assoc
Motif
Other DBs
NCBI-GeneID:
107385115
NCBI-ProteinID:
XP_015814252
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Position
sgr10:complement(24943642..24982819)
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AA seq
1162 aa
AA seq
DB search
MEANCRISFLLHTCSSSFILIWILTGLNLAEVAGSQQGIPLSVVKLWASAFGGEIKSISA
KYSGSQLLQKELWSITGPRPGTNSSSETSPPVRTSSRFKSSVACLWEEGGTPRGSPRKYG
ESVQTAFRKRLQAQNPGASCPEKYKEPEKSVRVEEIDGVKLVKNLAVKMEEMFQKKAEAT
RRLVEAAEEAHHQHDDNPDLQYEYFNAVLINEVDEEGNNVELGGDFILEPNDHFNNLSVN
LSLSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVENFERDPTLIWQYFGSAKGFFRQYPG
VKWHPDEHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTL
GDDDFFNIIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLDKLFAKGIGLLGEALTEAF
SILNDFNQTGRGSVCSQAIMLVTDGATEMYDDVFEKYNWPERKVRIFPYLIGRESAFADN
LKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALTHAYK
LNDKSGPSLTTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKLIPKHMLGIHGYVFA
ITNNGYILTHPDLRPLYQEGQKRRKPNYSSVDLSEVEWEDKDYILRNAMVNRRTGTFSME
VKRTVDRGRRVLKMHNDYYYTDINGTPFSVGVALSRGHGKYFFRGNVSMEAGLRDLEQPD
VALADEWTYCNTEEKHEHRHLSQIQAIKLYMMGRRPHLKCDRELIQEVLFDAVVTAPLKS
YWNSLALNKSENSDKGVEIVFLGTRTGLSRTKLFVPTDQLSNQDFLTAEDKEGVFNADHF
PLWYKRAAEQVPGTFVYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGLQMKLEYF
QRKFWTACRQCTALDGKCIISCDSEDINCYLIDNNGFILVTEEQSQTGLFFGEVEGAVMN
KLLQMGCFKRITLYDYQALCREYAGSSDSARTLSDPFSVVKWLLTELVIFLLEFNLYSWW
NVDFSVKAQRSRSKTMMVPCDTEYPAFVSERTIKETTGNIECDGCLRSFVIQQIPSTNLF
MVVVDNKCDCSSIPPVTMDPIEIMYNESLKCDRLKLQKDRKKPESCHPFHPEENAMECGS
ASRLSSRLAAILLPLLAATISR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaactgcaggatctccttcttgctgcacacgtgcagcagcagcttcattctc
atctggatcttaaccggcttgaatttggctgaagtggcggggtcccagcaaggaatccct
ctgtccgtcgttaagctgtgggcctctgcatttggtggagaaatcaaatcgatttctgct
aaatattctggatctcagctcctacaaaaggagctgtggtccatcacaggtccacgtcca
ggaaccaattccagttcagaaaccagtcctccagtgaggaccagcagcaggtttaagagc
tcagtggcttgtctgtgggaggagggaggaactccaagaggaagtcctcgaaagtacgga
gaaagtgtgcagactgcattcaggaagcgactgcaggctcagaatcctggagcgtcctgt
cccgagaaatataaagaacctgaaaagtcagtcagggtggaagagattgatggagttaaa
ctggttaaaaacctggctgtgaagatggaggagatgttccagaagaaagcagaggccacc
aggcggctggtggaggcagcagaggaggcgcaccatcagcacgacgacaatccagacctg
cagtatgagtacttcaacgccgtactgatcaacgaggtggacgaggaaggtaataacgtg
gagctgggaggagacttcatcctggaacctaacgaccatttcaacaacctctctgtcaac
ctgagcctcagtgtggtgcaggttcccaccaacatgtacaacaaagatcccgatatcgtg
aacggggtctactggtctgaggccctaaataaagtcttcgtggagaactttgaaagagat
ccaacacttatctggcagtactttggaagtgccaaagggttcttcagacagtatcctgga
gtaaagtggcatccagatgaacacggcgtcatcggatttgactgcagaaacaggaagtgg
tacatccaggcggcaacttctcccaaagacgtggtgatcttggttgacgttagtggaagc
atgaaggggctgaggctgacaatcgccagacaaactgtatcctccatactggacacactg
ggagacgatgacttcttcaacatcattgcatacaaccaggagatccactacgtggagcct
tgtttgaatggtaccctggttcgggcggacaggaccaataaagaccatttccgtgagcat
ctggacaagctgtttgccaaagggatcggacttctgggagaagcgctgaccgaagccttc
agcatcctgaacgattttaatcagaccggacgaggcagtgtgtgcagccaggccatcatg
cttgtgacagacggagcgactgaaatgtacgatgatgtttttgagaagtacaactggcca
gaaagaaaagtgcgcatattcccctacctgattgggcgagagtctgcgtttgctgataat
ctcaaatggatggcttgtgccaacaaaggatattttagtcagatctccactttagctgat
gttcaggagaacgtgatgagatatcttcacgtcatgagtcgtccaaaggttatcgatcac
gagcacgacaccgtgtggacagaagcgtacgttgacagtgctctcacccacgcctataag
ctgaatgacaaatcaggtccaagtctgacgaccacagtggccatgcctgtgttcagcaca
aagaacgaaacgaagaaccagggtattctgctgggggtcgtcggcacagacatccctctg
caggagctgatgaagctcatcccaaaacatatgttagggatccatggatacgtgtttgcc
atcactaataatggctacatcctgacacatccggacctcaggcctttgtatcaggaaggt
cagaagaggaggaagcctaattacagcagtgtggatctctctgaagtggagtgggaggac
aaagattatattctacgcaacgctatggtaaacaggaggacggggactttctccatggag
gtgaagaggactgtggacagagggaggcgtgtactgaagatgcacaacgactattactac
acagacatcaacggaactccattcagtgttggagtagctctctcaagaggtcacgggaag
tatttcttcagaggaaacgtttccatggaagcagggctccgtgatctggaacagccagat
gtcgccctggcagatgaatggacctactgcaacacagaggagaagcatgagcaccgtcac
ctgagtcagattcaagcgataaagctctacatgatgggccgcagaccacacctcaaatgt
gacagagagctgatccaggaggtgttgtttgatgctgtggtcacggctccgctgaaaagc
tactggaacagcctggctctcaacaaatccgagaactcagataaaggagtagagattgtc
ttcctaggaacacggacgggtttgtcccgaactaaactgttcgtccccactgatcagctc
tccaatcaagatttcctgacagctgaggacaaggaaggtgtgtttaacgctgatcacttc
cccctgtggtacaagagagcagcagagcaggtccccggcacatttgtctactccatcccc
ttcagcacagctttagaaaacaagagtgtggttttggccagtacggccattcagctcctc
gatgacagaaagtctccaattgttgctgctgtaggactccagatgaagcttgaatacttc
cagagaaagttctggaccgcctgcagacagtgcacagctctggatggaaaatgcatcatt
agctgtgacagtgaggacattaactgttacctgattgacaacaacggcttcatccttgtg
actgaagaacagtctcagacaggactcttctttggggaggtagaaggagccgtcatgaac
aagctgctccagatgggatgttttaaaaggatcactctgtatgattatcaggccctgtgc
agagagtacgctgggagcagcgacagcgcgcggactttatcagacccgttttcagtggtt
aagtggctcctgacggaacttgtcattttcctgcttgagttcaacctgtacagctggtgg
aacgtcgatttttctgtcaaagctcagaggtcacgcagtaaaaccatgatggtgccatgt
gacacggaatatcctgcttttgtctctgagcgcaccattaaagaaacgacgggcaacatc
gagtgtgatggctgcctcaggtcatttgtcatacagcagattcccagcaccaacctcttc
atggttgttgtcgacaacaagtgcgactgcagcagcattcctccggtcaccatggatccc
atcgagatcatgtacaatgagtcgctgaaatgtgaccgactgaagcttcagaaggacaga
aaaaagcctgagtcctgccaccccttccaccctgaggaaaatgccatggagtgtggctca
gcctctcgcctctccagtcgcctggcggcaatcctgctccctctgttagcagcgaccatc
agcaggtga
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