Nothobranchius furzeri (turquoise killifish): 107385130
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Entry
107385130 CDS
T05163
Symbol
rad54l2
Name
(RefSeq) helicase ARIP4 isoform X1
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107385130 (rad54l2)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107385130 (rad54l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
107385130
NCBI-ProteinID:
XP_015814290
UniProt:
A0A1A7Z9Z4
LinkDB
All DBs
Position
sgr10:25468220..25481668
Genome browser
AA seq
1509 aa
AA seq
DB search
MSEEAISESDLEASFDSEEECMENEEEEDSENMEDDDDENDEDDKDGDDELSPCLIQDRP
SSAQSQADGTRDDGDSSSASSEDLSSEPSSQPASRPSSRAPSRPSSRSQAPTSPELSSQS
KPTSSKRKKKKSSKLAKSSKSSKGFKPSKLSKPHKLHKPAHMRKNIRKLLKEDQLEAGTK
AAQQEEMDRRKRLEQQRKEFPTQAPVLLDSQLVKTAALLAEVSHLVPVNQSDVICLDSSG
EEDEKAESTLPALAIRDDVIELSSGDEDAMQISSDEEADGPTGSEESSGAHINDSLNMPD
AQGRVLVNINHPPEEKDIYLAPQLARAVKPHQIGGIRFLYDNLIESLDRYSTSSGFGCIL
AHSMGLGKTLQVISFIDILLKNTEALTVLAIVPVNTLQNWLTEFNLWLPPQDALPADTDP
MFLTGRTFKVHILNDEHKSTVARAKVVEEWSRDGGVLLMGYEMYRLLTMKKSFVMGKKRK
TKKAAGPVIIDLDEEDRQQELMKGIEKAISRPGPDVVICDEGHRIKNYHASTSQALKNIR
SRRRVVLTGYPLQNNLTEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCVDSTPQDVRL
MRYRSHVLHSLLEGFVQRRGHDVLRGHLPNKEEFVILVRLSPIQKALYTEFMRRFREAGN
SGWLSLNPLKAFCVCCKIWNHPDVLYEALQKENQTNEQDLDLDEITSSSNPRCPAPSSDL
KAKSDSSNSKVNNSLPPLNVSQDRASQVITYEWAKDIMSNYQAGVLENSAKMVLLFHLIE
ESVRREDKILVFSQSLFTLTVIEDFLSKRPIPQSSASADGQNHNWVRNLNYYRLDGSTSS
SERERLINQFNDPENKTAWVFLLSTRAGCLGVNLIGASRVVVFDTSWNPCHDAQAVCRVY
RYGQRKPCNIYRLVCDFTLEKKIYDRQISKQGMSDRVVDDLNPVLNFTRKEVESLLHFVE
EEPEAEKISKSRESVEPVINRICELYPNLITKAPFHHESLLVDRKESKLTKAEKRAAKKS
YEDEKRASVPYSRPSYAPYYPTSDQDLASIAAFNQHGWRHLNRPDDKPVASVRPTQSTPI
PMIPRHARMGMSGSSPAGSLPLNFLQKAGVYVQRIVTSADIIFPGSNSTTDVQARIPAGE
IIHVIRGSKGSYIRTKDGRIFAIRAGKLSSPITGGTSASRDSQGSSVQSISNGCSSPVDP
QQCSPDPDQQVSSPSNSEILRELSHYTSPPGDLSSEMGNKPADVPSGPTGEGGGPQTGNL
RREISDDLLTSVLEMRGKKRKHSDIQGNAQIGGNHASAAAHFPGLSMGSGGLSFPPVGLN
SSSLLGNLGHMSQPLLMGGGGSSFLQNPGQTLADLQSMFPSAGTDLLRQPATGNSHLPVP
SSSSAFSSASTTIPMPSMPSAGTSSSLISGSLPPYLMNPNMAGLLSSSFPLSYNQPLLSS
SRMFPPSLLSASGGFPTPNSNSAASGYLPQFTNPTSSLLGSALTQPDRHPSTANGGDSSD
DDVIEVMGQ
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaggccatttcagaaagtgacttggaggccagctttgacagtgaagaagag
tgtatggaaaatgaggaagaggaggacagtgagaacatggaggatgatgacgatgaaaat
gatgaagacgacaaagatggtgatgatgaactctcaccatgtcttattcaagaccgccct
tcaagtgcccagagccaagcagatgggactcgggacgatggggactccagttcggcttcc
tctgaagacctttcctctgagccttcgtcccagcctgcatctcgtccatcctcccgagct
ccctccagaccctcctcccgttctcaggctcccaccagcccagagctctccagccagagt
aagccaacttccagtaaaagaaagaaaaaaaaatcctctaaattagccaaatcatcaaag
tcttcaaaaggcttcaaaccttccaagctttccaaaccccacaagctccacaagcctgca
catatgaggaaaaatatcaggaagctgctgaaggaggatcagctggaggcaggaactaaa
gcagctcagcaggaggagatggataggaggaaacgactggagcagcagaggaaagaattc
cccacacaagcacctgttctcctagattcccaactagtgaaaacggcggctttacttgca
gaagtttctcacttggttcctgttaaccagtcagatgttatctgtctggacagcagcggt
gaggaagatgaaaaagcggagtcaactttacctgcgcttgctattagagatgacgtgatc
gagctcagttcgggtgatgaggacgccatgcagataagcagcgacgaggaagctgatggt
cccactggctcagaggagagcagtggcgcacacattaatgactcgctgaacatgcctgat
gcccagggacgagtgctggtgaatattaaccacccaccagaggagaaggacatttacctc
gccccacagctggccagggccgtcaaacctcaccaaatcggtggaatccggtttctctat
gataacctcatcgagtctctggatcggtacagcaccagcagtggctttggctgcatcctg
gctcacagcatgggcttggggaagacactgcaggtcatttccttcattgacatccttctg
aagaacaccgaggcactcaccgtgctggccatcgtccctgtgaatactcttcagaactgg
ttgacagagttcaacctctggctgcccccccaggatgccctgccagccgacactgaccct
atgtttctcaccggacgcacattcaaagttcacattctcaatgatgagcacaaatccaca
gtggccagggccaaggttgtggaggagtggtcaagagacggaggtgtgttgttgatgggt
tatgagatgtaccgcttgctgactatgaaaaagagctttgtgatggggaagaagaggaaa
actaagaaggctgctggaccggttatcattgaccttgatgaagaggatcgacagcaggaa
cttatgaaaggaattgaaaaggccatatcccggcctggtcctgatgtggtgatctgcgac
gagggccatcgcatcaagaactaccacgccagcacatcgcaggcactgaagaacatccgc
tcccggcgccgggtggttctgaccggttacccgctacaaaataacctcactgaatactgg
tgcatggtggactttgtcaggccggactttttaggcactcgccaggagttcagcaacatg
tttgagcgtcccattctgaacggtcagtgtgtggacagcacgccacaggatgtccgccta
atgcgctaccgaagtcacgtgctgcacagcctgttggagggttttgttcaaagacgaggc
cacgatgtgctcagagggcatcttccgaacaaggaggagtttgtgatcttggtgcggctc
tcgcccattcagaaggcgctctatacggagttcatgaggcgctttcgagaagcagggaac
agtggctggctcagtctcaacccactcaaagccttctgcgtttgctgcaaaatctggaac
cacccagatgtcctctatgaagccttgcagaaggagaatcagaccaatgagcaggacttg
gacctggacgaaatcacctcctccagtaaccctcgctgccccgctcccagctctgatctg
aaggccaaatcggactccagcaacagcaaagtcaacaacagcctgccaccactcaatgtg
tctcaagatcgggccagtcaggtcatcacgtacgaatgggcgaaggacataatgtcaaac
taccaagcgggagttctggagaactctgctaagatggttctgctcttccacttgatcgag
gaaagtgtcaggagggaagacaagattctggtctttagccaaagcttgttcaccctcaca
gttatcgaggacttcttatcgaagagacccattccccaaagcagcgcgtccgctgacggc
cagaaccacaactgggttcgcaacctcaattactacaggctagatggaagtacatcatct
tcagagagagaacgacttatcaatcagtttaatgatccggagaacaagacagcatgggtg
ttcctgctctctaccagggcgggctgtttgggggtaaatctgatcggcgccagtcgggtt
gttgtgttcgacacatcttggaacccctgccacgacgcccaggcagtttgtcgcgtgtac
cgttacggtcagagaaaaccctgcaacatttaccgcctggtctgtgacttcacgctggag
aagaagatctacgacaggcagatctccaagcagggcatgtcggatcgcgtggtcgacgac
ttgaacccagttctgaactttactcgtaaagaagtggaatcgcttctacattttgtagaa
gaggagcccgaggcagaaaaaatctcaaaatcccgtgaaagcgtagagccggtcattaat
agaatctgtgagctctacccgaacctcatcaccaaggcacctttccaccacgagtcactg
ctggtggatcgtaaggagtcaaaactcaccaaagcagagaagagagcagcgaagaagagc
tatgaggatgagaaacgagcctccgtaccgtactctcgcccgtcatacgctccctattac
cccacgagtgaccaggatctggcaagcatagcagcctttaaccaacatggctggcgccac
ctaaaccgaccagacgacaagcccgtagcgagcgtccgacccacccaatcaacaccgatc
ccaatgatccctcgccacgcccgcatgggaatgtctggctccagccctgcaggaagccta
cctctcaactttctgcagaaagccggcgtttatgtgcaaaggatcgtcacctcagctgat
attattttccctggatccaacagcacaacagatgttcaagctcgcattcctgctggagag
attatccacgtaatcaggggatctaaaggttcttacatcaggacaaaagacggaaggatc
tttgctattcgagctggaaaactcagcagcccaataacggggggcacttctgcttcaaga
gacagccagggctcctcggtccagtccatcagtaatggctgctcgtcgcctgtcgatcct
cagcagtgttctcctgaccctgaccaacaggtgtcctctccttccaactctgagatcctc
agggagctcagccactacacctcacccccaggtgatctgtcgtctgagatggggaacaaa
ccggcagacgttccatctgggcccacaggagagggaggaggcccgcagaccggtaatctc
aggagggagatcagcgatgacctcctgacttcagtgttggagatgcgaggcaaaaaacgc
aagcacagtgacatccagggcaacgcacagatcggaggcaatcacgcttcggccgcagct
catttccctggactgtccatgggttcaggtggacttagttttccacctgtgggtctgaac
tcttcatcccttctggggaacttaggccacatgagccaaccacttctaatgggcggtggc
gggtcgtcgtttcttcagaatccggggcaaacgctggccgacctacagtccatgttcccc
tcagcaggcacggacttactgagacaacctgccacagggaacagccaccttcccgtccct
tcctcgtcctctgctttctcctctgcgtccaccactattcccatgccatctatgccctcg
gcaggaacttcctcctccctcatatccggttctttgcctccatacctaatgaaccccaac
atggccggtctgctttcatcgagtttccctctgagctataatcagccgctgctttcctca
tcgaggatgttccccccgtctctcctctctgcatcaggggggttccccacccctaactcc
aactctgctgcatctgggtacctgccacagtttaccaaccccacctccagcctgctgggg
tctgctctgacccaaccagacagacatccgagtacagcaaacggaggggacagttctgat
gatgatgtcatagaggttatgggacaataa
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integrated database retrieval system
