Nothobranchius furzeri (turquoise killifish): 107385181
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Entry
107385181 CDS
T05163
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107385181 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107385181 (stau1)
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107385181 (stau1)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107385181 (stau1)
mRNA cycle factors
Stress granule specific factors
107385181 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
107385181
NCBI-ProteinID:
XP_015814382
UniProt:
A0A1A8U250
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All DBs
Position
sgr10:26837553..26846088
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AA seq
687 aa
AA seq
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MRMSQLQFQCPVSSMPAASAPLQLGQPQPGYSIPCATGALPSESASQPIRSSALPAGSAT
PYNTTTVNMANPKEKTPMCLVNELARFNKLQPEYKLLSEQGPAHSKIFSVRLTLGDQHWE
AEGTSIKKAQHSAAASALTETTLPKPTMRMPRNTADGITHTMELNALCIKLGKKPIYKPI
DPYPGMRPPNFNYNVRAPPYQRSMQQYYYPFTPVGPMIYHMELSIGGQQYVGKGRTRQMA
KHDAAAKALKVLQKEPMLQQCPEVNGESEDENLNKSEISQVFEIALKRNLPVIFEVLKEE
GPPHMKNFVVSVSVGEFSGNGEGKSKKIAKKLAAAAVLCELKRLPHIPSVERKLPRIKKK
TKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYTLVTERGLPRRREFVMQVTVCGQ
SAEGMGPSKKVAKRNAAEKMLELLGYKVPQPQPPKPALKTEEKTPVKKPGDGRKVTFFVE
EVALAPKEEDFRLPYLSHQQLPAGILPMVPEVAQAVGACQGPQVKDYSRVVPNPGKATIT
AMIANELLYAGVSSTAETILKNKNSLSQLPHGPLTRPSEQLGYLASVQGLLVEYKDFPKN
NKNEFVSLINCSSQPPLISHGIGKDVESCHDKAALNILKILAELDQQPNERTENGPASGC
GKQELEGDLHLKQANSSTLAQTLDSKA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgtctcagcttcagtttcagtgtcctgttagttccatgcctgctgcttctgcc
ccccttcagctgggacagccgcagcctggctacagcatcccctgtgctacgggcgcccta
ccatcggagagtgccagtcagcccatcaggagctccgccctccctgcgggctctgccact
ccttataataccaccacagtaaacatggcaaaccctaaagagaagacccccatgtgcttg
gtgaatgagttagctcgtttcaacaagctccaacctgaatataagctgctttctgagcaa
gggccagcacactccaagattttctcagtgaggttgacgctgggagatcaacactgggag
gcggaggggaccagtatcaagaaagcccagcattccgctgctgcttctgctcttactgag
acaactcttcccaaacccaccatgaggatgccgcgtaacacagctgatggcatcacacac
accatggagctgaatgcactttgcataaagctcggtaaaaaacccatctataaacccatc
gacccgtatcccgggatgagaccgccgaacttcaactacaacgttcgtgctccgccttac
cagcgctctatgcaacagtactactatccatttaccccggtaggaccgatgatttatcac
atggagctctccatcgggggtcagcagtacgttggaaaggggcgtacacggcagatggcc
aaacacgatgctgctgccaaagcgctgaaagtcctgcagaaggagcccatgctgcagcag
tgtccagaggtgaatggagaatccgaggatgagaacctaaacaaatcagaaattagccaa
gtttttgaaattgccctcaaacgaaacttacctgtcatctttgaggttttaaaagaggag
ggccctccacacatgaagaattttgtcgtgagcgtttcagtcggagagttctcgggaaac
ggcgaggggaagagtaaaaagatcgccaagaagctggcggcagcggcggtgctgtgtgag
ctgaagaggctcccccacataccgagtgtggaaaggaagctgccacgcatcaaaaagaaa
accaaatctatcatcaagctgcagaccagccccgagtatggccaggggatgaatcccatc
agccgcctggctcagatccagcaggccaagaaggagaaggagcctgagtacactctggtt
acagagagaggtctgccacggcgccgggagtttgtcatgcaggtgactgtgtgtggccag
tctgcagagggaatgggaccgagtaagaaggtggccaagaggaacgcagctgagaaaatg
ctggaactcttgggatacaaagtgcctcagcctcagcctcccaaaccggctctgaaaacg
gaagaaaagacccccgtgaaaaaacctggcgatgggcgtaaagtgaccttctttgtggag
gaggtggcgttagctcctaaagaggaggatttccgcctgccttacctcagccaccagcag
ctgcctgcgggcatcctgcccatggtgcctgaggtggcccaggcagttggagcctgccag
ggaccccaggtcaaggactacagccgagttgtgcccaacccgggcaaggccaccatcact
gccatgattgccaacgagctgctttatgctggagtgtcatcgactgctgagactatccta
aagaacaaaaacagcctgagccagctgccccacggccccctcacgaggccgtcggagcag
ctcggctacctggcgtccgtgcagggcctgctggtggaatacaaagacttccccaaaaac
aacaagaatgagtttgtgtcgctgattaactgttcctcccagcctcctctcatcagtcac
gggattgggaaagacgtagaatcctgtcatgataaggctgcactgaatatattaaagata
ctcgctgagttggaccagcagccaaatgaaaggacagaaaatggaccagcctcgggatgt
ggaaaacaggagctggaaggcgacttgcacctgaaacaggctaactcaagcacattggca
cagacgctggatagcaaagcttag
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