Nothobranchius furzeri (turquoise killifish): 107385330
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Entry
107385330 CDS
T05163
Symbol
mars
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00450
Selenocompound metabolism
nfu00970
Aminoacyl-tRNA biosynthesis
nfu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
107385330 (mars)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107385330 (mars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nfu01007
]
107385330 (mars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfu03016
]
107385330 (mars)
Enzymes [BR:
nfu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
107385330 (mars)
Amino acid related enzymes [BR:
nfu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107385330 (mars)
Transfer RNA biogenesis [BR:
nfu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107385330 (mars)
Prokaryotic type
Other AARSs
107385330 (mars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C_2
GST_N_3
GST_N_2
HTH_23
tRNA-synt_1e
GST_C
Motif
Other DBs
NCBI-GeneID:
107385330
NCBI-ProteinID:
XP_015814626
UniProt:
A0A8C6PEE0
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All DBs
Position
sgr10:complement(31275498..31290065)
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AA seq
920 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAALEVTGVHCGVQYISHEEKVVPFLSRPSFPALLLPSGQHLFSS
NAICRYFFEVNGQESNDVSNQWLEWETIVLQPVLHQALHMAVVQGKGSEVSRVLQSPLNF
LDQSLSKGSMPHLTGESVSVADVILWAALYPVLSDSSLALGEHKFVRAWFDHLAAMHSCQ
SAAQKVLQGKAMKNYMQKQSVPQSFQCRDTQPSNSSPAESEEGERAVSEEEMEAATLTWR
KGLTSCSLATERQHPLLPEEGKRNILLTSALPYVNNVPHLGNIIGCVLSADVFSRYGRLR
GWNLLFVCGTDEYGTATENKAREEGLTPQQICDKYHAVHSSIYKWFQIDFDFFGRTTTEK
QTEIAQDIFWRLHKNGFLVEDTVEQLRCENCQRFLADRFVEGTCPHCSYPEARGDQCDKC
GRLINAVELREPQCKVCRQTPIIRSSKHLFLDLPKLERQLEQWLEKSTSTGDWTANAKQI
TRSWIRDGLKPRCITRDLQWGTPVPHPDFKEKVFYVWFDAPIGYLSITASYTNEWDKWWK
NPQQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKSRGVG
VFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRAGMFV
TKFFEGCVPEMDLQREEKKLLAVVGWELQQYIQLMDKVRIRDALKHILNISRHGNQYIQV
NEPWKKIKGGESDRRRAGTVTGVSVNIACLLSVMLFPYMPLVSQTIRDQLNAPQSCIGTM
LQGTGTFVCALSAGHRIGTVSPLFQKLETDQIEALKKRFGGQQPEDEASNEKKPAQSSVS
APAAPGAEVKVVGGVDPEKAEQLTKAVAEQGEKVRALKAQKAEKDVIAAEVSKLLELKKH
LALAEGKNAAPAPQTGKKKK
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtttgttagcgaaggcaacccgcactgcctgaaggtgttagctgctctggaa
gtgacaggagttcactgcggcgttcagtacatcagccacgaagagaaagtggtccctttt
ctcagccgtccatcgtttccagctcttctcctgcccagtggacaacacctttttagctct
aatgctatatgcagatacttctttgaagtgaatggacaagagtccaacgacgtcagcaac
cagtggctggaatgggagaccatagttcttcagcctgttctgcatcaggctcttcacatg
gccgtggtacagggaaaaggatcggaggtgtctagggtccttcagagtcccctaaacttc
ctggatcaaagcctgagcaaagggagcatgccacatttaactggggagtctgtctcagtt
gctgatgtcatcctgtgggcggctctataccccgttttatctgactcttctttagcactg
ggtgaacataagtttgtcagggcttggtttgaccatttggctgctatgcacagttgtcag
tctgctgctcagaaagtgttgcagggaaaggccatgaagaactacatgcagaagcagtct
gtgccccagagcttccagtgcagagacacacagccaagcaacagcagccctgctgagagt
gaggaaggtgagcgcgccgtctcagaggaggaaatggaagcagctactctcacctggaga
aaaggtctgacctcctgctctttggccacagaaagacaacaccctcttttgccagaagag
ggcaaaagaaacatccttttgacgagcgctttgccttatgtcaacaatgtcccacacctg
ggtaatatcattggctgtgttctcagtgctgatgtcttctccaggtatggccgcctgcga
ggctggaacctgctgtttgtgtgtggcacagacgaatacggcacggccacagagaacaaa
gccagagaggagggcctgacacctcaacagatctgcgacaagtaccacgctgttcactct
agcatctacaaatggttccagatcgactttgactttttcggcagaaccaccacagagaaa
cagaccgaaatagctcaggacatcttctggcgactccataaaaatgggttcctggtagaa
gacacagtagagcaactacgctgtgagaactgtcagcgtttcctggcagatcgcttcgtg
gagggcacgtgtccccactgcagctatcccgaagctcgtggagatcaatgtgacaagtgt
gggcgcctcattaatgctgtggagctcagggaacctcagtgtaaggtctgcaggcagact
ccaataatccgctcctccaaacatcttttcctggacctgccaaagctagaaagacagttg
gagcagtggttggagaaatcaaccagcacaggagactggacagcaaacgccaaacagatc
actcggtcctggataagagatggactcaaaccgcgctgcatcaccagggacctgcagtgg
ggcacgccggtacctcaccctgactttaaggagaaggtcttctatgtgtggtttgatgcc
cccattggttatctgtccattactgccagctacaccaatgaatgggacaagtggtggaag
aatcctcagcaggtggagctgtacaactttatggccaaagacaacgtgccatttcacagc
gtggtgttcccctgctccctactgggagcccaggacaactacactctggtcaatcacctg
gttgccaccgaatatctgaattacgaggacacaaagttctccaagagccgtggcgtgggt
gtgtttggtgacatggcgaaagacacgggcatcccgtcagacgtgtggcggttctacctg
ctgtatgtccgtccagagggacaagattcagctttctcctgggctgacatggctctaaag
aacaactcggagctgctcaataatctgggaaacttcatcaacagagccggaatgtttgtt
accaagttctttgagggatgtgtgccagagatggatctgcagcgagaggagaagaagctc
ctggctgtggtgggctgggagctgcagcagtacatccagcttatggacaaagtccgaatt
cgtgatgctctgaaacacatcctgaacatttctcgtcatggcaaccagtacattcaggtg
aatgaaccctggaagaagattaaaggaggagagtcggacaggcggcgtgctggcactgtg
acgggtgtttctgtaaacatcgcctgcttgctgtcggtgatgctctttccttacatgcct
ttggtcagccagaccatcagagatcaactcaacgctcctcagtcttgtatcggcaccatg
ttgcaaggcaccggcacctttgtgtgtgctctgagtgccggtcatcgcatcggcactgtc
agtccattattccagaaactggagacggaccagattgaagctttgaagaagagatttggt
ggacagcagcctgaagacgaagcgtctaatgagaagaaaccagctcagagctccgtcagc
gctcctgctgctcctggtgctgaggtgaaggtggtgggtggagtggacccggagaaagcc
gagcagctgactaaagctgtggctgagcagggagaaaaggttcgagctcttaaagcccag
aaggcagagaaggacgtgatcgcagccgaggtgtccaaacttctggagcttaagaaacac
ctggctcttgctgaggggaagaacgctgcacctgcacctcagacgggcaagaagaagaag
tga
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