Nothobranchius furzeri (turquoise killifish): 107385371
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Entry
107385371 CDS
T05163
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04217
Necroptosis
nfu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
107385371
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107385371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107385371
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
107385371
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
107385371
Multi subunit type E3
LUBAC complex
107385371
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_5
zf-RING_2
IBR
zf-C3HC4
zf-C3HC4_2
Zn_ribbon_RanBP
ubiquitin
zf-RING_11
zf-C3HC4_4
dsRBD2
Motif
Other DBs
NCBI-GeneID:
107385371
NCBI-ProteinID:
XP_015814693
UniProt:
A0A1A8V7C5
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All DBs
Position
sgr10:33234608..33247986
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AA seq
513 aa
AA seq
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METGISPRSNLKEAEELALSLSEALSCGDTDEAIELCKKLSQLSVPVSVSIDSSVYPQDS
IRLMVGVEDAQSDNYIPLTVMVSSGMTIGQLKDKINQDFGFHPLLQRWVIGKRIAKDQDT
LYYHGIRKNGDQAFLFILSAQSVHLTRHQYQQDQEQQRLEGIVDSIRLLPRGLGGINENK
APPPVPPKKPVAKKPAMLLKPQLGWECVMCTYLNKPTRPGCEMCGGDRPEDYRVPDIYKP
DEEEVERIEQEQLALLQFELAQQEEREQNYLYFLATDDQNLIANTTAADCPVCFTAMAPG
DGVVLRECLHTFCRECLKETIVNSQDAEVSCPDNCDSKLLDREIKELLTEEELQRFLELR
LNIAESRSEHSFHCQTPNCRGWCIYEDDINEFNCPLCNETNCILCRAIHNGMNCKDYQDD
LRIRAENDKAAQQTKQMLDNLLQNGEAMKCPRCDIIVQKKDGCDWICCLMCKTEICWVTK
QARWGPDGRGDTSGGCRCRVNNQPCHPNCQNCH
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagactggcatttcacccagaagtaacctgaaagaagcagaggaacttgctctctct
ctgagtgaagccctcagctgtggagacaccgatgaggcgattgagctgtgcaagaagctt
tctcaactctctgttcctgtgtcagtcagcatcgacagcagtgtctacccacaggactcc
atcaggttgatggttggagtggaagatgcccaatcagataactacattccattgactgtt
atggtttcctctggcatgacaattggacaacttaaagataagatcaaccaggactttggg
ttccacccattactgcagcgctgggtgattgggaagcggatagctaaagaccaggacacg
ttatattatcatggtatccgcaagaatggggatcaggcgttcctgttcatcctctctgct
caatctgttcatctcacacggcatcaataccagcaggaccaggagcagcagcgtctagag
gggatcgtggattcaatcaggctccttcccagagggcttggcggaataaatgaaaataaa
gctcctcctcctgttcctcctaaaaagccagttgctaaaaagcctgccatgcttctgaaa
cctcagctgggatgggagtgtgtgatgtgcacatacctgaacaagccaacacgcccgggc
tgtgagatgtgtggaggggacaggccagaggattacagggtgccggacatctacaagcca
gacgaggaggaagtagaacggattgaacaggaacagctggcactgctgcagtttgaacta
gctcagcaggaagaacgcgagcagaactacttgtactttttggcaacagatgatcagaac
cttattgcgaacacaacggctgcagattgccccgtttgttttacagcgatggcgccagga
gacggtgttgtactcagagaatgtctgcacactttctgcagggagtgtctaaaagagaca
atagtaaacagtcaggacgctgaggtgtcctgtccagacaactgtgacagcaagttactg
gaccgagagattaaagagctgcttacagaagaggagctccagcggtttttggagttacgt
ttaaacatcgcagagagccgctcggagcacagcttccactgtcagactcccaactgtcga
ggctggtgcatctatgaggatgacatcaacgagttcaactgcccactatgcaatgaaacc
aactgcattctctgccgagccatccataatggcatgaactgcaaagactatcaggatgac
ctgcgcatccgagctgagaatgacaaagcggcccagcaaaccaagcagatgttggataac
ttgttgcagaatggagaggccatgaaatgcccgcggtgcgacatcatcgttcagaaaaaa
gatggctgtgactggatctgctgtttgatgtgtaagacggagatctgctgggtcaccaaa
caagctcgatggggaccagatggccgtggtgacacgtccggtggctgtaggtgtcgagtc
aacaatcagccatgtcatcccaattgccaaaactgccactga
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