KEGG   Nothobranchius furzeri (turquoise killifish): 107385480
Entry
107385480         CDS       T05163                                 
Symbol
ubap2
Name
(RefSeq) ubiquitin-associated protein 2 isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nfu04121]
    107385480 (ubap2)
   03400 DNA repair and recombination proteins [BR:nfu03400]
    107385480 (ubap2)
Ubiquitin system [BR:nfu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    107385480 (ubap2)
DNA repair and recombination proteins [BR:nfu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107385480 (ubap2)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N UBA_8 Methyltransf_32
Other DBs
NCBI-GeneID: 107385480
NCBI-ProteinID: XP_015814866
UniProt: A0A1A8U8M1
LinkDB
Position
sgr10:38773987..38787190
AA seq 1251 aa
MMSSLGSEKARGPREKVLPAVTHTSQPQKQIQATAEQIRLAQMIYDTNDADFEDKVNQLM
EVTGKNQDECMVALHDCNEDVSRAINFLLESTSDMTSWETVGKKKPLVKEGPSESKENKE
NREKKGEREVSKGRASSNRKGKGGSRRGQARPEENGMEATPVVDKGSDRGRRLKGSRGSG
VRGRGRAPAGSRFSAQGMGTFNPADYTSEAGTGTTQTEVWDTANNNSTDGTVAWRSTLED
WAAEEWSEDVSLSETKVFTPSCAPAAENHIPPAQSLDLASLLQKPGVGGREPPSSTSTQS
LVFTNSHHHQQPPPSRNATSSTSYAHAALSSVLGAGFGDLGQAKRSQPSAGAQILEQLKG
PGLGQLPSSQAAPPVSTQGSNTSIGRLPGLGAPVPPPSSSSWDMKASESNTSSLSTQFSC
EFGLQPEPSLVLSQLVQRHTGPSLPLARQASPPSQQQAPSASASSAPQHISTPAQAGPVM
AAAGVKPPTSGAGLDPQGSSTPQQQRVQLKGPKRRIPPTSKIPSTAVEMPGSADVPGLNL
QFGALDFGSESALPEFGGVDNCVSAVSRDSTPAPVSVPPASGPGTQSHASLYSKPLSDSL
GSPLSVALPSPLSSSEPVYHSSAVAMPSLTSSLGSAGSANPPSSTSTTSTTSSSAPSSSH
FSAVGGSYDGTKPPHARLAFQQSKEATGPVMNGLNGVRTSAALDTSSASSTPKPESPSVN
INTSGPPAPSSHLPSLSSTTLPNLAQDLPPAGQLNSLNSHGSSHSSVSALGSSSLTYTSV
DSNNMSSLAPSSSSYTSSQPASSSLHSAHNSSNSSSSSISHLANMASLGSNMSSTVGGIT
GAGGLHSAAIIATSAALGLGSNGATATSNLSAPRTTPLLSSTGKAPPNLSQGVPPLLPNQ
YIMGPGGLLPAYPQIYGYEDLHMLQSRLPMPSLQDYYGITFPGPTAALSGRDGSLANNPY
SGEVTKFGRNDSTSPAPPTSLAAPQPPQAQSQGQTQAQPQPPQAQPQGQPQHHSSQQAFL
PPGYSYTGLPYYPGVPGAVPSAAAFQYGPTVFVPPGGPGPASAKQHSMGLGLGNPSASPF
QQQAQQQPSGYGQHTFSSGYEELTAGPAGVEYSKAYNSSSQAQAKSAAAGPGKGVSVTSS
NSGVPDISGSVYNKTQSFDKQGFHAGTPPPFSLPSALGGPGPLNPGAAPGGYAPAPFLHI
LPHQQPHSQLLHHHLAQDGQGGLGQRGQSSSLQQKSQVNKSSYGSSPYWAN
NT seq 3756 nt   +upstreamnt  +downstreamnt
atgatgagctcactgggcagcgagaaggcccggggcccacgggaaaaagtgctgcctgct
gttactcacacctcgcaaccacagaaacagatacaggctactgctgagcagatccgactt
gcccagatgatctacgacacgaatgatgctgactttgaggacaaggttaatcagctgatg
gaagtgacggggaagaatcaagatgagtgtatggtagctcttcacgactgtaatgaggat
gttagcagagccatcaatttcctcctggagagcacctccgacatgacctcatgggaaaca
gtgggaaagaagaagcccctggtgaaagagggaccatcagaaagcaaggagaacaaagag
aatagggagaagaaaggagagcgtgaggttagcaagggccgtgcttcttccaaccgtaaa
ggcaaagggggaagtcggagagggcaggcgcgtccggaggagaacggtatggaggcgaca
ccagtggtggataaagggtcagatcgaggtcggaggcttaaaggtagcagaggatcagga
gttcgaggtcgaggtagagcaccagcggggagcaggttctcagcccaaggcatggggact
ttcaaccccgctgactacacctcagaggctggaactgggaccacacaaacggaggtttgg
gacacagccaacaacaacagcacagacgggacagttgcctggaggagcactttggaggac
tgggctgctgaggagtggagtgaggacgtcagtctctcagagaccaaagtgttcaccccc
tcatgtgcacctgctgcagagaaccatatcccacctgcgcaaagtctggacctcgcctct
ctgctgcagaagcctggtgttggaggaagagaaccaccctcctccacctccacacagagc
ctggtcttcaccaactcccaccaccaccagcagccaccacccagccgcaacgcgaccagc
agcacaagctatgcacacgctgctctgtcgtcggttctgggagctggctttggggacttg
ggccaggccaaaaggtctcagcccagcgctggcgctcagatactggaacagctaaagggt
cctggcttaggccagctgccctcatcccaggcagcccctcctgtcagcacccaggggagc
aacacctccatcggtcgactgccgggtctgggagcacctgtacctccaccctcctcctcc
agctgggacatgaaggcatcagagtcgaacaccagctctctgtctacacagttcagctgt
gagtttggcctgcagccagaaccttctcttgtgctgagccagctggttcagagacacaca
ggtccctccttacctctggctcgtcaggctagtcctccatcgcagcagcaagcgccctct
gcttcagcatcgtctgctccccagcacatcagcacgccagcacaggccggcccagtgatg
gctgctgctggtgttaaacctcctacttccggagctgggctggacccccagggcagcagt
acgccacagcagcaacgggtgcagctcaaaggccccaaacgacggatacctcccacatcc
aagattccctctacagccgtggagatgccaggctcggctgatgttcctggactaaacctc
cagtttggagctctggactttggctcagagtctgcactaccagagtttggaggtgtggac
aactgtgtgagcgcagtgtcccgggattccacaccggcgcctgtttcagtgccacctgca
tcaggaccagggacccaaagccacgccagcttgtactctaaacccctcagcgactcactg
ggcagccctctctccgttgctctgccttcgccactgtcatcatcagaacccgtgtatcac
tcctccgccgtggccatgcccagcctcacgtcttcattaggttctgctggctctgccaac
cctccatcctccacgtcgacaacctcaacgacctcttcctccgcgccctcctcctcccac
ttctccgctgtgggggggagttacgatgggacgaaacccccccatgcgcgactggccttt
caacagagcaaagaggccacagggccggtgatgaacgggctgaatggtgtaagaacctcc
gctgctctagacacctcatcagcatcttctacaccgaagccagaatctccgtctgtgaac
atcaacaccagcggtcctccggccccctcctcccacctaccctcactcagctccaccacg
ctccccaacctggcacaggacctgccaccggcgggtcagctcaactcactcaacagccat
ggcagcagccattcctcggtttcagctctaggatcaagctctctcacttacacgagtgtt
gacagcaacaacatgagctctctggctccgtcgtccagctcttacacgtcgtctcagccc
gcaagctcgtcgctccactcagcacacaacagcagcaacagtagcagcagcagcatcagc
cacctggccaacatggccagcctgggcagcaatatgagcagcacagtgggggggatcacg
ggggcaggtggactccactctgctgctatcatcgccaccagcgccgcactgggactcggc
tccaatggagctactgccacatcaaacctctctgcaccaaggaccacacccctgctctcc
tccactggtaaagctcctcctaacttgtcccagggagtgccgcctctactacccaaccag
tatattatgggcccaggagggctgctgccagcttacccacagatctatggctatgaggac
ctccacatgctccagtccagactgccaatgccctctctgcaggattactatggtatcaca
ttccctggccccacagcagctctctccggcagagatgggagtttagccaacaacccctat
tcaggtgaagtcacaaaattcggtagaaacgactccacctccccagcaccccccaccagc
ctggctgccccacagcctcctcaggcccaaagccaaggacagacccaggcccagcctcag
cctcctcaggcccagcctcagggccagccgcagcaccacagcagccagcaggccttcctg
cctcccggctacagctacacgggcctgccgtactaccccggggttcccggtgccgtgccc
agtgctgccgcctttcagtatggccccaccgtgttcgttcctcctggtggcccggggccg
gcttcggccaagcagcacagtatgggtctgggtctgggaaacccctcagccagcccgttc
caacagcaggcgcagcagcagcccagtggttatggccagcacactttcagctcaggttat
gaggagctgacagccgggccagctggagtagagtacagtaaagcgtacaactcctcctca
caggcacaagccaaatctgctgctgcagggcccgggaaaggggtctcagtgacatccagt
aactccggagtgccagacatcagtggaagtgtttacaataagacccagtcttttgataag
cagggtttccatgcagggaccccccctcccttcagcctgccgtcagccctggggggtcca
gggcctctgaaccctggagcagctcctggaggctatgcacctgctccgttcctccacatc
ctgcctcaccagcaacctcactcacagctgctgcaccaccatctagctcaggatggacag
ggtggcctaggccagcgaggccagtccagcagcctgcagcagaagagccaagtcaacaag
tcgagctacggcagctcgccttactgggccaactga

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