Nothobranchius furzeri (turquoise killifish): 107385526
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Entry
107385526 CDS
T05163
Name
(RefSeq) iroquois-class homeodomain protein IRX-3-like
KO
K19553
homeobox protein TGIF2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107385526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107385526
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
107385526
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
107385526
NCBI-ProteinID:
XP_015814945
UniProt:
A0A1A8V019
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Position
sgr10:complement(40995023..41001097)
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AA seq
499 aa
AA seq
DB search
MKAFKRALEDDLHPDQEHSSAMSDSDEGSLLDPSGRGLLGKRRRRGNLPKEAVQILRSWL
YEHRFNAYPSEQEKLSLSGQTKLSVLQICNWFINARRRLLPDLLRKDGKDPTKFTISRKV
CSKIEGHLSSAARASSPEASVSLQQRPSVIRSAPTLDLNLLGNTATAILTGAGYPGKQGS
VQALMNLDTQSLLREADETGPASSTAAASSSSGLFNTPPPTPPELFPTQDFSDLRLLVDA
ALQRAEEQDRLKEVQDLPPEALKTARSAYSSDLGPTPPPEEQVMDPSRVQSLMEKAMAVP
ESAGVSIKFPVSLGVAAPFSALRICPQLEAVRASSPHQPQLNPAVVPGSAYGLGQLDAQR
PAAAPVVSAALQLDSTSVPPSSTCPVLESLVSAPVTSPASTSATSQDTHSASKGVSLLLP
FHKTPGNALCVPSPGSASAAARLGLAPPLLPSSGAQRSSAVVPNVWSMVHSNTRQVVKTP
MTTMWGPQHSLHTMSEAVN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtttaaacgagctctggaggatgatcttcatccggaccaggagcactcttca
gccatgtcagacagcgatgagggatccctgcttgacccgtcgggaagggggctcctcggg
aagcggcgccgccgtggcaacctgcccaaggaagcggtgcagattcttcggagctggctg
tacgagcaccgcttcaacgcctatccgtcggagcaagagaaactcagcctgtcgggtcag
accaagctctccgtgctgcagatatgcaactggttcatcaacgcgcgtcgccgccttctc
cccgatcttcttcgtaaggatggcaaagatcccaccaagttcaccatctcccgtaaggtc
tgcagtaaaatcgaaggccacctgtccagcgcagcgagagccagctctccagaggccagc
gtctctttgcaacagcgcccgtctgtgattcgctctgcacccactttggacctcaatctc
ctggggaacacggccacagcgattctgactggagcaggctaccctggtaagcaggggtcg
gtgcaggcgctaatgaatctggacacgcaaagtctgctgagggaagctgatgaaacgggc
cccgccagctcaacagcggcagccagctcctccagtggcctcttcaacacgcctccccct
actcctcctgagctgttccctacacaggacttcagtgacctgaggctcctggtggacgct
gctctccaacgagctgaagagcaggacagactcaaggaggttcaggatctgccgccagag
gctttaaagaccgcacgcagtgcttacagcagcgacctgggcccgaccccgcctccagaa
gagcaggtcatggatccctctagagttcagagtctaatggagaaggctatggctgttcca
gagtcagctggagtgtcaataaaattccctgtgtccttgggagtggctgctccgttctca
gccttgaggatttgtcctcagctggaagccgtcagagcgtccagcccacaccagccccag
ctcaacccagccgtggtgccagggtctgcctatggcctggggcagctagatgcgcagaga
ccagctgctgctccagtggtcagcgcagccttgcaattggattcaacttctgtcccacct
tcttccacatgtccggttttagaatcactcgtctctgcaccggtcactagtcccgcctca
acctctgctacaagtcaggacacacactcggcctctaaaggagtctcgctcctcctgccg
ttccataaaactccgggaaacgctctgtgtgttccatcccccggttctgcgtcggctgca
gcccgcttgggcctcgcccctcctttgctgccctcctctggtgctcagcggagttcagcc
gtggtgcccaatgtttggagcatggttcactcaaacaccaggcaggtggtgaagacccca
atgactacaatgtgggggccgcagcacagcctgcacacaatgagtgaagctgtcaactag
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