Nothobranchius furzeri (turquoise killifish): 107385551
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Entry
107385551 CDS
T05163
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
nfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107385551
03015 mRNA surveillance pathway
107385551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107385551
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107385551
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107385551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
107385551
NCBI-ProteinID:
XP_015814995
UniProt:
A0A1A8UN76
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All DBs
Position
sgr10:complement(41889589..41897742)
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AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESISSLRIKDKPEENGTVLNATDSSSVAAKPEPEGDCKPTDED
DKDDKAAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYAMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNHFPQCLCVSPT
YELALQTGKVIEQMGKYYPEVKLVYAIRGQKLQRGTKLQEQIVIGTPGTMLDWCGKFKFI
DPKKIRVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEESVWNFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNCKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFSKKIERLDTDDL
DEIEKIAG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacagactcctgggcacaggcagtggacgaacaagaggccgcagctgaatcgatc
agtagtcttcgcataaaagacaaaccagaggaaaatgggacggtcttaaacgctacagac
tcgagcagcgttgctgcaaaaccagaacccgaaggagactgcaaacctacagatgaagat
gataaagatgacaaagcagcacagtcactgttgaacaagctgatccggaataatcttgtt
aatacaacaaatcaagtcgaagttcttcagaaggacccaaactctcccctttactctgtg
aagtcttttgaagaattacgactcaagccacagctgctacagggtgtctatgccatggga
ttcaataggccgtcaaagatccaggaaacggccttacccatgatgctggctgagcctcca
cagaatctgatcgcccagtcacagtcaggaacaggaaaaacagctgcctttgtcctggcc
atgctcagtcatgttgaccccaacaaccattttcctcagtgcctgtgtgtgtcaccaacc
tacgaactagcccttcagactggtaaagtgatcgagcagatgggcaaatattatcccgaa
gtcaaacttgtctacgccattagaggacagaagttgcagcggggcacgaaactgcaggag
cagatcgtcatcggcactcctggtaccatgttggactggtgcggtaaattcaaatttata
gacccaaagaaaatccgagtgtttgtgctggacgaggccgacgtgatgatcgccacacag
ggtcaccaggatcagagtattagaatccagaggatgctgcccaaaaactgccagatgttg
ctgttctcggctacgtttgaagagagtgtttggaactttgcccagcgcattgtgcctgat
ccaaacatcatcaagctgaagagagaggaagagacgctagacaccatcaaacagtactat
gtgttgtgtaactgcaaggaggagaagttccaggctctgtgcaacatctacggtgccatc
accatcgcccaggccatgatcttctgtcatacaaggaaaactgcaggctggctcgcgggg
gagctgtccagagaaggtcaccaggtcgctctgctcagtggagagatgcaggtggagcag
agggctgctgtcatcgaacgcttcagagacggaaaggagaaagtcctggtcactacaaac
gtttgtgctcggggtatcgatgtggagcaagtttctgtggtgatcaattttgacctgcct
gttgacaaagatggtaaccctgacaacgagacatacctgcacaggattggacgtacaggc
cggtttgggaaaagaggactggccatcaacatggtggacagcaagatgagcatgaacatc
ctcaacaggatccaagagcatttcagtaagaagattgaaagactagacacagatgatctg
gatgaaatagagaaaattgccggctaa
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