Nothobranchius furzeri (turquoise killifish): 107385702
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Entry
107385702 CDS
T05163
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107385702 (ccdc174)
03041 Spliceosome [BR:
nfu03041
]
107385702 (ccdc174)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107385702 (ccdc174)
Spliceosome [BR:
nfu03041
]
Complex C
Other components
EJC/TREX
107385702 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
107385702
NCBI-ProteinID:
XP_015815259
UniProt:
A0A1A8UUZ9
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Position
sgr10:46791737..46796724
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AA seq
542 aa
AA seq
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MDKKKKTLDVAASSLVDLKAELYRKQEQFKREKLGQESSDAGHRAKSTANKKPNIWSKQN
AGVSARAAKDAEQLTEEQISLDTARRKLEEKARLYDQMTKGDFPDEETEALYLVDFTQKI
IDKQKETFAPKKREQEDEERESLSPIPPPQNPDEEWVDFVDALGRSRRCMKKDLPSFQKL
DQDIKGTGAITSENTLLSEDMRRELQRREWEREEEEAMKRPVGPVHYENIRAQEARDLGV
GYFAFAHDEEQRRKQRETLDMLRDQTTEQRTKRERLKDKRKAILQARLAKVRQRKKKKGK
LDGTEEDENEKEEENPGEDEEDEAVGPTPQPDVPPEASILRKVEVEIQERRDTKPGVPHV
REWDRGKEFMFSEWKSRRRDERDSEFAPPTAYFTEEKRLKPAKAKHQENKAHMFFKSRKA
PGGVSESETEPQPPASSQPSPPPPAETSPPSAPPLSAPSFIPRYPPPPAFYPPFPPPPPF
QFAGPPRHVLPPFPPQSSYQYLPTPAHDIQPPPPGVESPIQQLPEGAPQNLDDMLSFYRN
SS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaaacattggacgtagctgcgtcatcgttagtagatctgaaagcg
gagctctacagaaaacaggagcagttcaaacgggagaaacttggccaagaaagctctgat
gctggacaccgagctaaatccacagccaataagaaaccaaatatctggagcaaacaaaat
gctggcgtgtcagcaagagctgcgaaagacgcagagcagctgacagaggagcagatcagc
ctcgacacagccaggcgcaagttggaggagaaggccagactctatgatcagatgactaaa
ggagactttccagatgaagagacagaagccctttaccttgttgacttcacccagaagatt
attgacaaacaaaaagaaacatttgcaccgaagaagagggagcaagaagatgaggaaaga
gagagcctgtcccctattcctcctcctcagaacccagatgaggaatgggttgattttgtg
gacgctttgggacgatctcgaagatgcatgaagaaagacctgcccagttttcagaaactg
gaccaagacattaaaggaacaggagcgatcacttctgagaacaccttactctccgaggac
atgcgcagagagctgcagaggcgggagtgggagagggaggaagaggaggcaatgaagagg
cccgttggacctgttcactacgagaatattagagcacaagaggcccgtgaccttggtgtg
ggctactttgccttcgcccatgatgaagagcagcgcagaaagcagagggaaactctggac
atgctcagagaccagaccacagagcagcggactaagagagaacgactcaaggacaagagg
aaggccatccttcaggctcgactagccaaggtgaggcagaggaagaagaaaaagggaaag
ctggatggcactgaggaggacgagaacgagaaggaagaggagaatccaggagaggatgaa
gaggacgaagctgtcggacccacccctcagccagatgtaccaccagaggccagcattctt
aggaaggtggaagtggagatccaggagaggagggacaccaaaccaggagttccacatgtt
agagagtgggatcggggcaaagagttcatgttcagcgagtggaaatctcgccgtcgggat
gagcgggactcggagttcgccccccccactgcctacttcactgaagagaaaagactgaaa
ccagcaaaggctaaacaccaggagaacaaagcccacatgttcttcaagtccagaaaagct
ccaggaggggtctctgaaagcgagactgaacctcagcctccagcttcctctcagccatca
ccgcccccacctgcagagacctccccgccttcagcaccccccctctcagctccctctttt
atcccccggtatcccccacctcctgctttttatcctccatttcctcctccacctcctttt
cagtttgcaggtccaccacgccatgtccttcctccgtttcccccccagtcctcataccag
tatctgcccacccccgcccatgatatccagccacctccgcctggagttgaaagcccgatt
cagcagcttcctgaaggagctcctcagaatttagatgacatgctttccttctacaggaac
tctagctga
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