Nothobranchius furzeri (turquoise killifish): 107385732
Help
Entry
107385732 CDS
T05163
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nfu01002
]
107385732 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107385732 (usp4)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107385732 (usp4)
Peptidases and inhibitors [BR:
nfu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107385732 (usp4)
Ubiquitin system [BR:
nfu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107385732 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Motif
Other DBs
NCBI-GeneID:
107385732
NCBI-ProteinID:
XP_015815294
UniProt:
A0A8C6VU91
LinkDB
All DBs
Position
sgr10:47687916..47708615
Genome browser
AA seq
1010 aa
AA seq
DB search
MCLVLARSRYRHTGCMMAEGGGPDSGSAADSDSEPVAAQIPTPSTENQKQTIGSLLKTTL
KRGDEWYLIDSRWFKQWKKYVGFDSWDMYNVGERSLYPGPIDNSGLFSDQDTQALKEHLI
DELDYVLVPTEAWNKLVSWYSCLEGQKPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNM
DNVITRHFSKADTIDTIEKEMRKLFNIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLF
QGQVLVIERKNEDGSWSRQPSHPKSSATPSRNFTTSPKLSSNSSVSTSPTVTNGDSSSSP
GCTLNNSTSSSNSRFGSYSSYSSYNYRDSQSQPGLCGLSNLGNTCFMNSALQCLSNVSPL
TEYFLNDQYEAEINRENPLGMRGEIAEAYADLVKQMWMSRSTYVAPRTFKTQVGRFAPQF
SGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSV
IVDIFHGLFKSTLVCPECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPQSRPTQYR
VVVPKLGTVTDLCSALSKLCGIPPEHMVVADVYNHRFHKIYRRDDGLNQIMEKDDIFVYE
VQEEDRERMNLPVYFRERHSKHMGSSSSTSLFGQPLLISVPRHNLVADVLYVKILERIGR
YVKPAHSPNGSRALASATITSCNQASECSTSSSLGGCGSPQSEGASCNSSNGSNHSGTCS
EANGIYDAEEEAMDHQVSPEPENGQSEEEEEASDLENGSNGETSKLFTFSVVNSYGTVNI
SPLPCDGNVLKLNPHSTVAIDWDTESKKLCYDEQEAEAYEKHESMLQPQKKKTTVALREC
IELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTL
VDFPIRDLNMSEFVCDPKAGPYVYDLIAVSNHYGGMGGGHYTAYGKNKVEEKWYYFDDSS
VSSASEDQIVTKAAYVLFYQRRDEESHATPQPSASLGGAPESADDHMDTN
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttagttttagcgcgttcacgataccggcacactggctgcatgatggctgaggga
ggcggacccgattcgggtagcgcggcagactccgactcggagccggtagccgcacaaata
cctaccccatcaacggaaaatcagaaacaaactattgggtcactattgaaaacaacttta
aaaagaggggacgaatggtatctaatagacagccggtggttcaaacaatggaaaaagtat
gtggggtttgacagctgggatatgtacaatgttggagaacgtagcctctatccgggacca
attgataactctggactattctcagaccaggacactcaggccctgaaagagcaccttata
gatgaactagactatgtccttgtacccacggaggcatggaacaagcttgtcagctggtac
agctgtctcgagggccagaaaccaatcgtcaggaaggtggttgaacatggcatgtttgtg
aagcactgtaaggtggaagtctatctgctggagctcaacctgtgtgagaatgacaacatg
gacaacgtcatcacgcgccattttagtaaagctgacaccatagatacaatagagaaggag
atgcggaagttgtttaatatcccttcagaaaaggagactcgactctggaacaaatacatg
agcaacacgtatgagcagctgaataagccagacagcactgtacaggatgccggactcttc
cagggacaggtgctcgtgattgaacgcaagaacgaggacggctcgtggtcgaggcaacct
tcccatcccaaatccagcgcaaccccatctcggaatttcaccacctccccaaaactgtcc
tccaactcatcagtcagtacgtcgccaacggtaaccaatggagacagcagctccagcccc
gggtgcacgctgaacaacagtacctcctccagcaacagcagattcgggagctacagttcc
tacagctcctacaactacagagattcccaatcccaacctggcctgtgtgggctcagtaat
ctgggaaatacgtgcttcatgaactctgctctccagtgcctgagcaacgtgtctccgctc
accgagtacttcctcaacgatcagtacgaagcagagattaaccgagagaacccgctggga
atgaggggggagattgccgaggcctatgcagatttagtgaagcagatgtggatgagccgc
agcacttacgtggcacctcgtactttcaaaacccaggttgggcgctttgctccacagttc
tcaggctaccagcagcaagactcgcaggagctgctggccttcctgttggacggtctccat
gaagatctgaaccgtgtcaagaagaagccttatctggccctgagggatgcagagggccgg
ccggatgaaatcgttgccaaggaagcctggaccaaccaccgcttacgcaacgattcagta
atagttgatatctttcacggcctcttcaaatcaacgctggtgtgtccagaatgctccaag
gtatctgtaacctttgaccccttctgctacctcacgctgcctcttcccatgaagaaagac
cgtaccatggaggtttttttggtgcgatcagaccctcaatccagacccacacagtatcga
gtggtggtccccaaactgggcacagtgacagacctgtgcagcgccttgtccaaactctgt
ggaattcctccagagcatatggtggtggcagatgtttacaatcataggttccataaaatt
tacagacgagatgatggcctcaaccaaataatggagaaagatgatatttttgtgtacgag
gtacaggaggaggacagggaaaggatgaacctgcccgtgtatttcagggagcgccactcc
aaacacatgggaagctcctcgagcacctcgctgtttggccagcctttactcatcagcgtc
ccccgacataacctggtagcagatgttctttatgtcaagatcctggaaaggattgggcgt
tatgtaaaacctgcacacagccctaatggtagcagagcgttggcgtctgccaccataacc
agctgcaaccaggcttctgaatgctccacatcatccagcctggggggctgcggcagcccc
cagtcggagggggcctcgtgcaactccagtaatggcagcaaccactcaggaacgtgcagc
gaagctaacgggatctatgatgctgaagaggaggccatggaccaccaggtgagcccggaa
ccggagaacggtcagtctgaagaggaggaggaggcttctgatttggaaaatgggtccaat
ggagagacatccaagctgttcaccttcagcgtagtcaactcttacgggacagtcaacatc
agcccgctgccttgtgatgggaatgtcctcaaacttaacccacattctaccgtggccatc
gactgggacacggagtcaaagaaactgtgttatgatgagcaggaagcagaggcctatgag
aagcatgagagcatgctgcagcctcagaagaagaaaaccactgtggctctgagggaatgt
attgagctcttcaccacgatggagactctgggagaacacgacccttggtattgtccaacg
tgtaagaaacatcaacaggccacgaagaagttcgacttgtggtcgctgccgcgcatcctg
gtggttcacctgaagcgtttctcctacaatcgatgttggagagacaagctggacaccctg
gtggacttccccatcagggatctaaacatgtccgagtttgtgtgtgaccccaaggcgggc
ccctacgtctatgaccttattgctgtttctaaccactatggaggaatggggggtggtcac
tacacggcttatgggaagaacaaggtggaggaaaagtggtattactttgatgacagcagt
gtctcgtctgcctcagaagaccagatcgtgactaaagccgcctacgtgctgttttatcag
cgcagagacgaggagagccacgccacacctcaaccatctgcctcactgggaggcgccccc
gaatcagccgacgaccacatggacacaaattag
DBGET
integrated database retrieval system
