Nothobranchius furzeri (turquoise killifish): 107385824
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Entry
107385824 CDS
T05163
Symbol
chl1
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107385824 (chl1)
Cell adhesion molecules [BR:
nfu04515
]
Immunoglobulin superfamily
L1 family
107385824 (chl1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
Bravo_FIGEY
Ig_5
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_4
Ig_6
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
107385824
NCBI-ProteinID:
XP_015815435
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All DBs
Position
sgr10:52917489..53333811
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AA seq
1194 aa
AA seq
DB search
MRLQRSPALAAVLIIITCVCAFYTTAAINIPLEIEQPPTITAQPPSSLIAFPFDESFPMT
CEAKGNPRPEFRWTKNGQEFNHSVDPRLMKEENSGTFVIPNNGNLTEYQGTYRCYASNTL
GTAVSQEVEFIVSNEPKFPKETLDPVKVDEGQPFILKCDPPTGIPPLQIYWMTINMQHIQ
QDERVSVGLNGDLYFSHAVEKDSRTDYCCFASFPRIRTIVQKTAMSVHVKPRARDSSESA
NAILERRPSLLTPPGVQSEKQLVKGDDLELECIPEGIPTPKVEWVKIGLGLPDGAEVENH
GKLLIIPRADQKDSGKYMCKAKNPLGEAVHYFTVTVEEPPEWVSEPQSQLSMIGTDVLIK
CSARGTPEPSITWRVNGVPLKDSPAANRRIFDDTIIIRNSKASDSAVYQCEASNRHGSLL
SNANIMIRNLPPMILTKDGEGYFAVESRGVTLHCNAFSSPPSTITWSKDDSSESVEGSRF
KIHDDGSLEISRAEKSDAGQYTCLAKNTEGSSNIDAMLYVKDATRIVVTPEDQQILKGSE
ALLSCLAEYDESFSHDFELVWEKDDIEISFNDTVNLRYFVEDSVLHIVNVSHGDQGVYRC
VARTPVDQDEASALLMVLDVPDAPENLVLSEHRGRSVKLTWIPGDDHNSSITDFIIEYEE
NKWEMGKWRELLRVSRNQNSAVLRLHGHVEYRFRVYGVNSVGAGPPSKPTEMYRTPPAAP
DKNPENIKIEGHLPHEMDINWEPLLPIEHNGPGLEYKVSYRRQDVEEEWTEHTVKRHSFV
VKNTPTFVPYEIKVQAKNNQGWGPEPRIVSGYSGEDFPSTAPDDVAVEVMNSSVVKVTWT
PVHKDKLRGHLGGYRINWWRLRSLVDSKKRHGDKHMLTFPGDRNHATVPGLTPFSEYSLI
VMTFNGRGNGPGSHPINFKTPEGVPEKNPVFRVTDVQRHSISLTWTPPSEPNGILTGYLL
EYQLINGTEEVGALQTIDINNPKTSKWVLRDLEPLSKYKLYLRSCTTKGCGPVVSEECTT
DLETTSTLVPSLDLSESASTPAPSTPKPHKTKPTRSSIGLASVHGGISTQGWFIGLMCAI
ALLTLIVLIACFVNRNKGGKYSVKEKEDLHPDVESQGMNDDTFCEYSDNDEKPLKGSQHS
LSREIKAGDSGDSLVDYGDEDAQFNEDGSFIGEYGPRKEKRVSAEIKAPVQTPA
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgcagagaagtccagcacttgctgccgtgctgatcatcatcacctgtgtttgt
gccttttatacaacagcagccatcaacattccactggagattgaacagccgcccaccatc
accgctcagccacccagctccctaatcgccttcccttttgatgaaagtttccccatgacg
tgtgaagccaaggggaatcccaggccagaattcagatggacaaagaacggccaggaattt
aaccactccgtagacccccgcctgatgaaagaggagaattctgggacctttgtgatacct
aataatgggaacctgacagagtaccagggtacctatcgctgttacgcttcaaacacactg
gggaccgccgtatcccaggaggttgagttcattgtgtccaatgaaccaaaattccctaaa
gagactctagaccctgtgaaggtggatgaaggtcagccttttattttgaaatgtgaccca
cccactggtattcctcctctgcagatctactggatgactatcaacatgcagcacatccag
caggatgagagggtgtctgtgggtctgaatggtgacctttacttctcccacgccgtggag
aaggacagcaggacggattactgctgcttcgcctccttcccgagaatacgcaccatcgtt
cagaagactgccatgtctgtccatgttaaaccaagggcacgtgacagttctgagagtgct
aatgccatcctggagaggagaccctcgcttctgacgccccctggtgtccagtcagagaag
cagctggttaaaggcgatgacttggagctggagtgtattccagaaggaattccaactcca
aaggtggagtgggtgaagatcggcctcgggcttcccgatggagctgaagtggagaatcat
gggaaactgctgatcattccaagagctgaccagaaggacagtgggaaatatatgtgcaaa
gcaaagaacccactgggagaagcagtccattacttcactgtgacagtggaagaacctccg
gagtgggtgtcagagcctcagagtcagctcagtatgatcggaacagacgtgctcatcaag
tgctctgccagagggaccccagagcccagcatcacttggagggtgaacggagtacctctg
aaggattccccagcggccaacaggaggatatttgatgacaccataataatccgtaactcc
aaagcctctgacagcgccgtctatcagtgtgaggcctccaaccggcacgggagcctctta
tccaatgcaaacatcatgatcaggaatctaccgcccatgattctgactaaggacggagaa
ggttattttgcagtggagagcagaggagtgacgctccactgtaacgctttcagctcaccc
ccttccaccatcacttggagtaaagatgactcctctgaatctgtggaaggttctagattt
aagattcatgacgacggctcgttggagatctccagagcagagaaaagtgacgcaggacag
tacacgtgtttggcaaaaaacacggagggatcatccaacatcgacgccatgctttatgtt
aaagatgccactagaatcgtagtgaccccagaggaccagcagatcttaaaaggctcagag
gccctgctctcctgcctggcagagtatgacgagtccttcagccacgactttgaactcgtg
tgggagaaagacgacatagagatctctttcaacgacaccgtgaatctacgatactttgtg
gaggatagtgttcttcacatcgtcaatgtgagccacggagaccagggggtgtatagatgt
gtggctcggactccggtggaccaggatgaagcctcggccctcctcatggtgttagatgtt
cccgatgctccggaaaacctggttctgtctgaacacaggggcaggagtgtgaaactgaca
tggatccctggagacgatcacaacagctccatcacagacttcattatcgagtatgaggaa
aacaagtgggagatggggaagtggagggagctgctccgagtatccaggaaccaaaactca
gctgtcctgagactccacggccacgtcgaataccgtttccgagtctacggcgtgaactct
gtaggagcagggcctcctagcaagcccacagagatgtacagaaccccccctgcagcccca
gacaagaaccctgaaaatatcaaaatcgaaggtcatttgccacatgaaatggatatcaac
tgggagcccctgttgcccattgagcacaatggccctggtctggagtacaaggtcagctac
aggcgccaggacgtggaggaggaatggaccgaacacactgtgaagagacactcgtttgtg
gttaagaacacacccacgtttgtgccgtatgaaatcaaggtccaagccaagaacaaccag
gggtggggcccggagcccaggatcgtgagcggctactcaggagaggactttccctcaact
gcacctgacgatgtagctgtggaggtgatgaacagctctgtagtcaaggttacctggaca
ccagtacacaaggacaagctgcgtggacacttgggaggctacaggataaactggtggcgg
ctgaggagtttagtggactcgaagaaacgccacggagacaaacacatgctgacgttcccc
ggggatcggaaccacgccactgtgccgggactgacgcctttctctgagtacagcctcatc
gtcatgaccttcaacgggcggggcaacggccccggcagccatcccataaacttcaaaacc
ccagagggagtcccagagaaaaatccagttttcagagtcacagatgtacagaggcattcc
atctctctgacctggacccctccttcagagcctaatgggatcctcaccggatatctcctg
gagtaccagcttatcaatggcacagaagaagttggggccctgcagaccatcgacattaac
aaccccaagacatctaagtgggtcctgcgtgacttggagcctctgagcaaatataagctg
tatcttcgctcctgcaccacaaagggctgtgggcctgttgtcagtgaggagtgcaccact
gacttggagacaacttctactttggtgcccagtcttgacctcagtgagtcagcttccacc
ccagctccgagcacgccaaagccccacaagaccaaacccactcggtccagcataggtctg
gccagcgtccacgggggcatatccacccagggctggtttatcggcctgatgtgtgccatc
gctctcctcacactcattgtgctgatcgcctgctttgtcaacagaaataaaggagggaag
tattctgtaaaagaaaaagaagaccttcatccagacgtggagtcccagggcatgaatgat
gacactttctgtgagtacagcgacaatgacgagaagccgctgaagggcagccaacactcc
ctgagtagggagatcaaagcgggggacagcggggacagcctggtagactacggtgatgaa
gatgctcagttcaacgaagatggctcctttattggcgagtatgggccacggaaggagaag
agggtatccgctgagatcaaagctcccgttcagactccagcatga
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