Nothobranchius furzeri (turquoise killifish): 107385827
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Entry
107385827 CDS
T05163
Name
(RefSeq) contactin-4-like
KO
K06762
contactin 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107385827
Cell adhesion molecules [BR:
nfu04515
]
Immunoglobulin superfamily
Contactins
107385827
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
V-set_CD47
Ig_5
C2-set
C2-set_2
Ig_4
Pur_ac_phosph_N
Tissue_fac
Interfer-bind
NDNF
Motif
Other DBs
NCBI-GeneID:
107385827
NCBI-ProteinID:
XP_015815442
UniProt:
A0A1A8VFW6
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All DBs
Position
sgr10:53988328..54243074
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AA seq
1029 aa
AA seq
DB search
MMLLWKLLLLQSLMGCLAESSALQSPVFTKQPGSIVYPVQTVENNREVVFSCEAQGSPPL
VYRWKLNATEIIPKAGSHYSLSGGNLRISRLNKDQDAGTYQCLASNSFGTIVSREASLTF
AYLENFKTQRRSSVSVREGQGVVLLCGPPPHSGDLIFSWIFNEYPTYVKQDSRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEVVH
VAKGSTVKLECFALGNPAPSISWRRVDNVPFPRKVDTRKASGILEIPYFQQEDAGTYECV
AENSRGKNMVKGKLSFYAPPHLIEKPQDVQKLIDDSLVWECKATGKPKPSYRWMKNGENM
ESTEERIQVANEVLSISRLTLSDTGMYQCVAGNKHGEVYSNAELRVIAVAPDFSHNQVRS
QTLVKVGGDVLIECKPKMSPWGVISWRKGSEPLLETSRVSILESGSLRIWNVTKADAGLY
TCLARNQFGVASSTGSVTVKEPTIITTQPATLDVTVGESVVLPCQVSHDPSLELKFTWFF
NEQLIHFGNHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAADLVVRG
PPGPPTSIHVEEITDTTASLSWRPGSDNHSPIMAHTIQARTPFSLGWQAVTTVPEVVGGQ
QLTATVIDLNPWVEYEFRVLASNRVGTGEPSEPSKQARTKSTSPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGPGFGYVVAFRPHGTTGWMQAAVPSPEASKYVFKNESIQPFSPFHV
KVGVYNNEGEGPFGPVTTIYSAEEEPSRAPTRVRAKSLSASEAEVWWKALPWNASRRRVL
GYELRYWSRSEREDMASVQRTVGNQTSTVIRGMRGSTTYYVSVRAYNTAGTGPPSATVNV
TTKKPPPSQPPIKVMWNASNSKIILNWERVKALENESEVTGYKVLYKKNRHSRPSVMETN
TTSVELALPVDEDYIIQIKPFGEGGDGSSSRQITIPKIPGPNAVGSASKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctgctgctgcagtcacttatggggtgcctggcagagagc
agcgccctgcagagccccgtcttcaccaagcagccaggcagcatcgtgtatcctgtgcag
acggtggagaacaacagggaggtggtgttcagctgtgaagcccagggaagcccacctctc
gtgtaccggtggaaactgaatgcaacagaaatcattcccaaagctggatctcactacagc
ctttctggaggcaacctccgaatcagccgtctgaacaaagaccaagatgctggaacgtat
cagtgcctcgcctccaactctttcgggaccatcgtcagccgagaggccagcctaaccttt
gcttacttggaaaacttcaagactcagagaagaagttctgtttctgtccgcgagggtcaa
ggagtggttctgctgtgtggacctcctccgcactctggagatctgatattttcgtggatc
ttcaacgagtacccgacatacgtgaagcaggacagtcgccgcttcatctcacaggagacg
gggaatctgtacatcgccaaagtggagccttcagatgtgggcaactacacctgtgtggtg
acaaataccgtcacaaagacccgggtccagggcccgcccactccacttgtgctccgcagc
gatggtgttatgggtgaatatgagccgaagattgaagttcagtttccagaggttgttcat
gttgccaaaggatccacagtaaagctggaatgcttcgctctgggaaaccccgcaccctct
atcagctggaggagagtggacaatgtacccttccccaggaaagtcgacacaagaaaggct
agcggcatcctggaaatcccgtatttccagcaggaggacgccggcacgtacgagtgtgtt
gccgaaaactccagaggaaagaacatggtgaagggaaaactctctttctatgctccacct
catctcattgaaaagccccaggatgtccagaagctcatcgatgactctctggtgtgggag
tgcaaagccacggggaagccgaaaccctcctacagatggatgaaaaatggagaaaacatg
gagtctacagaggagcgcatacaggttgccaacgaggttttgtcaatcagtcgcctgacc
ctctccgacacaggaatgtaccaatgtgttgctgggaataagcacggagaggtctactct
aatgcagagctccgagtaattgctgttgcgccagatttctctcacaatcaggtgagaagc
cagacgctggtgaaggtcggaggagatgtcctgatcgagtgcaagcccaagatgtctcca
tggggtgtgatctcctggcgtaaaggcagcgaacccctcctggagactagcagggtttcc
atcctggagagcggcagcctccgaatatggaacgtcaccaaagccgacgcgggcctctac
acatgtttggccaggaaccagtttggagtagcaagcagcacaggaagcgtcacggttaaa
gagccgaccatcatcaccacccagcccgctacgctagacgtcaccgttggggagagcgtg
gtcctaccctgccaagtgagccacgatccatctctggagctcaagttcacctggttcttc
aatgagcagctcatccacttcgggaaccatggtggattctttgaaaaagtaggagggcag
cattctgcaggagacattatgattcgaaacatccagctgaggcatgcggggaagtacaca
tgtgccgtccaaaccaaggtggacagcatttccatcgctgcagacctggttgtccgaggt
cccccagggccccccaccagcatccatgtagaagaaattactgataccaccgcctctctg
tcctggaggcctggttctgataatcacagtccaattatggcccacaccatccaggccagg
acaccgttctccctggggtggcaggctgtcaccacagttcctgaggtggtcggaggccaa
cagctgacagctacagtgatagacctgaacccttgggtggagtacgagtttcgagttcta
gccagcaacagagtcgggaccggcgagcccagcgagccatccaaacaggcccggaccaag
agcacctctccgaaggtcactcctgctaacgtgagcggaggtggaggcagtcgctccgaa
ttagtcatcacatgggagcctgttcctgaggagttacagaacggaccagggttcggctac
gtggtggccttccgaccccacggcaccaccggctggatgcaggcagccgtcccgtcccct
gaagcatccaaatacgtctttaaaaacgagagcatccagccattctcgcctttccacgtg
aaggtcggagtttacaacaacgagggggagggaccatttggacctgtcaccaccatctac
tctgctgaggaagagccgagccgagcgcccaccagggtccgagccaagagcctctcagcg
tctgaggctgaggtttggtggaaagctctgccctggaacgccagcaggaggagagttcta
ggctacgagttgaggtactggagtagaagtgaaagagaggacatggccagcgtgcagagg
accgttggaaatcaaacgtctacggttatccgtgggatgagaggcagcaccacatattac
gtctcagtgagggcgtataacaccgctggaaccgggccgcccagcgccaccgtaaatgtg
accaccaagaaaccacctcccagccagccgcccattaaagtcatgtggaatgcgtcaaac
tccaagattattctgaactgggagcgggtcaaggccctggagaatgagtccgaagtcact
ggttacaaagtgctctataagaagaatcggcacagccggcccagtgtcatggaaaccaac
accacctctgtggagctcgctctgcccgttgacgaggattacatcatacagataaaacct
tttggagagggaggggatggcagcagcagcaggcagatcaccatcccaaagataccaggc
cccaacgcagtgggatcagcttccaaggtctccactctgtcggccctcagcacaatagcg
ctgtctttcacagcacggacatctttatga
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