Nothobranchius furzeri (turquoise killifish): 107385841
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Entry
107385841 CDS
T05163
Name
(RefSeq) integrin alpha-5-like isoform X1
KO
K06484
integrin alpha 5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03266
Virion - Herpesvirus
nfu04145
Phagosome
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04810
Regulation of actin cytoskeleton
nfu04820
Cytoskeleton in muscle cells
nfu05100
Bacterial invasion of epithelial cells
nfu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
107385841
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107385841
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107385841
09144 Cellular community - eukaryotes
04510 Focal adhesion
107385841
09142 Cell motility
04820 Cytoskeleton in muscle cells
107385841
04810 Regulation of actin cytoskeleton
107385841
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107385841
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107385841
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107385841
04515 Cell adhesion molecules [BR:
nfu04515
]
107385841
04090 CD molecules [BR:
nfu04090
]
107385841
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107385841
Cell adhesion molecules [BR:
nfu04515
]
Integrins
Integrin alpha subunits
107385841
CD molecules [BR:
nfu04090
]
Proteins
107385841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
107385841
NCBI-ProteinID:
XP_015815467
UniProt:
A0A1A8AUG9
LinkDB
All DBs
Position
sgr10:55220963..55301577
Genome browser
AA seq
1054 aa
AA seq
DB search
MGALPPGPPPTHRLLGQLRAVLILPVVVLWVQLCAAFNLDVETRVVFTGPRGSYFGYSVE
FFSSASSISLLIGAPKANTSQPAVTEGGAVYLCPWSQNNCSSIDFDKQGDQYFYINDVNT
QVEFKSHQWFGATVRSRGDNILACAPRYSWRTEHDVPFSDVTGTCYLSVDSLKTFVEFAP
CRTERHGPAGQGYCQGGFSADFTKDGRVVLGGPGSFYWQGQLISASTEEIVKAYYPSYFL
LSVAGQIQTQQVQGSYDDSYLGYSVTSGEFSGDSEEDFITGVPKGLMLYGLVSILNGRDL
NSLLNLTGEQMGSYFGYAVAVTDINKDGFDDLVVGAPMFMHRGTDGHLEELGQVYVYLQR
GPLLLRQSQHKLLGPQAFGRFGTSLAPLGDLNQDGFNDVAIGCPYGGEDQQGLVFIYNGH
TGGLKDVPTQTLSGQWASSSFPASFGFSVRGNRDVDQNGYPDLIVGAFGSDKAALYRSRP
IVSATASLSVQPAMFNQEESTCLVIKGNKTISVSCVSISFCLLAHGKHLSTPLGFVVEVQ
LDSLKQNQKESIRRTLFLESQQPSLMKSFNLTNGENMCHDTKIYLRAEEEFRDKLSPIYI
SLNFSLDPQAPLDQHGLRPILNYQTEQYVEQKAQIQLDCGEDNICVPDLKLDVYGDRAEV
YLGDENTLSLTFNARNEGEGGAYEAELYVAWPPEADYSGIARNNVSLTHLACSYEADNQT
RYLVCDLGNPMKSGTSLWAGLRFTVPRLEDTQSSVQFELQIRSKNTNNSESEVVLFELEV
AAVADVILQGVSRPDKVIFPPPNFTVHHNLRGEQDVGPELHQVYELVNNGPSSVSQASLV
VQCPLRAQDHALLYPVEVISKGPLSCSSETNFNALKLKLQPPAADGPKSLKSNTELRIQK
REVHRDLLGEQRNLTCGAVECWELSCNVGLLQRGGSTILTVRSRLWAETFMERPHKQYTL
ECLVHYKVNRMSYSILPKFKPSGSKKVVTTVMWAKPDGQFSVPVWIIILAVLAGLLLLAL
LIYLLYKMGFFKRSDPYGTTMEKAHLKPQASYEA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgctcccacctggacctccacctacacaccggctgctgggacagcttcgcgcc
gttctgatactacctgtagtggtcctttgggtccagctctgtgccgcctttaacctggac
gtggagacgcgcgtggtgttcacgggaccccgggggagttatttcggttattctgtggag
ttcttcagcagcgcgtccagcatcagccttttgatcggtgctccaaaagccaacaccagc
caaccggctgtaacagaaggaggagccgtgtatttgtgtccctggagccagaataattgc
agctctattgactttgacaagcaaggcgatcagtatttttacataaatgacgtcaacact
caggttgagttcaaatcccatcagtggtttggagcgactgtgcgttcccgtggtgacaac
atcttggcgtgtgctcctagatattcctggaggacagaacacgacgtaccattttcagat
gttactggaacctgctacctctctgttgacagcctcaagacctttgtggaatttgcccca
tgtcgaacggaaagacacggccctgctggacagggctactgtcaaggggggttcagcgcc
gacttcaccaaggatgggagagttgtgcttggaggacctggcagcttttattggcaaggc
cagctgatctcagcctccacagaggagattgttaaagcctactatccctcctacttcctg
ctgtcggtcgccgggcagattcagacccagcaggtgcagggaagctacgatgacagttac
ctgggttactctgtcaccagtggggagttcagtggggacagcgaggaagatttcatcaca
ggagttccaaaaggactcatgctgtatggtttagtgtccatcttaaatgggagggatctg
aattctctgctgaacttgactggggagcagatggggtcttactttggctacgcagtggcg
gtcactgacatcaacaaggacggttttgatgaccttgttgtgggtgctccgatgttcatg
catcgtgggactgacgggcatctggaggagctgggtcaggtctacgtgtacttgcagagg
gggcctctgctactcaggcagagccagcacaaacttctcggcccacaggcctttggccga
tttggcacctccttggctccactgggtgatctcaaccaggatgggttcaacgacgtggca
attggctgtccttatggtggtgaggaccagcagggactggttttcatctataacggtcac
actggtggactgaaggatgtgcctactcagactctttctggccagtgggcttccagctct
ttccctgcaagttttggcttttcagtcagaggcaacagagatgttgatcagaacggttac
ccagatctgattgttggtgctttcgggtccgacaaggctgcgctgtacagatctcgacca
atagtgagcgccaccgcatctctctcagtgcagccagccatgttcaaccaagaggagtcg
acttgcctggtgatcaaagggaataaaaccatttctgtgtcttgtgtcagcatcagtttc
tgcctgttggctcatgggaaacacctctccactccactaggatttgtggttgaggtacag
ttggacagcttgaagcagaaccagaaggagtccatcaggaggacattgttcctggagagc
cagcagcccagtctgatgaagagctttaatctcacaaatggtgaaaacatgtgccatgac
accaagatctaccttcgggctgaggaagagtttcgggataaactctctcccatctacatc
agcctgaacttcagcctggatcctcaggcaccactggaccaacacggccttcgtcccatt
ctgaattaccagacagaacagtatgtagagcaaaaggctcagatccagctggactgtgga
gaggacaacatctgtgttccggatctcaagctggatgtttacggtgacagagcagaggtc
tacctgggggatgaaaacaccttgagcttgacctttaatgccaggaacgagggagagggc
ggggcttatgaggctgagctctatgtggcgtggcccccagaggctgattacagcgggata
gcacgcaacaacgtgagtctgactcatttggcgtgcagctacgaggcagacaaccagacc
cgctatctggtgtgtgatctggggaaccccatgaagtccggtaccagtttatgggccggc
cttcggtttactgtgcccaggctggaggacactcagagttctgttcagtttgagctccag
atacgaagtaagaacaccaacaactcagagagtgaggtggtgctgtttgagctggaggtt
gctgctgtggctgatgtcattctgcagggagtttcacgtccggacaaagtcatcttccct
ccacccaatttcaccgtccatcacaatctgaggggggaacaagacgttggtcctgagctt
caccaggtttatgagctggtgaacaacggccccagttcagtgagccaggcatctttagtg
gtacaatgtcccctgagggcccaggaccatgcgctgctctaccctgtggaggtgatcagc
aaggggccgctcagctgctcctctgagactaacttcaatgcactgaaacttaagcttcag
cctccagctgcagatgggccaaagtcacttaagtccaacactgagcttcgcatccagaag
agggaggtgcaccgagatcttcttggtgaacaaagaaacctgacatgtggcgctgtggaa
tgctgggagctgagctgtaatgtggggctgctgcagagaggaggcagcaccatcctgact
gtacgctccaggctctgggctgagaccttcatggagagacctcacaaacagtacaccctg
gagtgtttggttcactacaaggtgaacaggatgtcatactctattcttcctaaattcaaa
ccttcaggatctaaaaaggtggtcactaccgtgatgtgggccaagccggatggtcagttc
tcagttccagtctggatcatcatcctggctgttctagctgggctgctgttactggcactg
ctcatatacctgctgtacaagatgggtttcttcaaaaggtcagatccatatggcaccacc
atggagaaggcccacctcaaaccccaggcctcctatgaagcctag
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