Nothobranchius furzeri (turquoise killifish): 107386097
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Entry
107386097 CDS
T05163
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107386097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107386097
03036 Chromosome and associated proteins [BR:
nfu03036
]
107386097
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107386097
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
107386097
Chromatin remodeling factors
BAF complex
107386097
PBAF complex
107386097
GBAF(ncBAF) complex
107386097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
107386097
NCBI-ProteinID:
XP_015815766
LinkDB
All DBs
Position
sgr11:<5722992..5792853
Genome browser
AA seq
1581 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPGPSPGSAHSMMGPSPGPGTPNAPHGMHT
QGQSDYSQDSMYPMHKSMEGTMNDKTMADTMHFGHMKGVGMRSLHSGMGPPQSPMDQHSQ
GYMSPHPSPMGIHEHASSPMSGSGGGPTPPHMPPSQSAPMMSLDPQAGMPSMSAMGQQGR
GPSAFSPVQLQQLRAQILAYKILARGQPLPDNLQLAVQGKRSLPTMQQQQPQQQQQQAPG
GSLYRPPGMPMAPLGGPQSSPLPAPPMQGLSQSSGPKPWSDGQGGDGQAPAQKHLTPVPS
GRPSPAPPQTPAVPTGPMLGSAAATHPPGQQVSPMLQVPQKQNRITPIQKPQGLDPVGIL
QEREFRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVACMRRD
TTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHAKDFK
DYHRSVSGKVQKLTRAIANWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKD
KRLAYLLQQTDEYVANLTSLVYEHKAAQAAKEKKRRKKRKKKVDGDCEGTSAIGPDGELM
DESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEE
EEEDEMAKAETEEKKKRGPNGEEGNVKEAKNIIETAKQDVDDEYSVPTGQTSSQSYYGVA
HAVIERVERQSSLLINGTLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY
LMEHKRLNGPYLIIVPLSTMSNWVYELDKWAPSVVKIAYKGTPGLRRGLVPQLRSGKFNV
LLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQ
NKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPF
LLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGGAKTLM
NTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIISGPDLYRASGKFELLDRILPKLQATS
HRVLLFCQMTSLMTIMEDYFGYRNFQYLRLDGTTKSEDRAALLKKFNEEGSQYFVFLLST
RAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCSVNSVEEKILA
AAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDETLNQMIARN
EDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEEEKMFGR
GSRCRRDVDYSDALTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDTSSRDNGGMKA
KKRRGRPPAEKFSPNPPKLTKQMNTIIDTVINYREGSGRQLSEVFVQLPSRKELPEYYEL
IRKPVDFKKIKERARNHKYRSLGDLEKDVMLLCQNAQTFNLEGSQIYEDSIVLQSVFKSA
RQKIAKDEESDDDSDEDDDDDYDSEAEAKAVRVKIKLSRDGRSHEKGKKRQSRGKAKPVV
SDDDSDEEDNDQSDKSKSDDD
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctgaccccccgatgggagggacgcctcggcccggtccctccccaggccca
gggccgtctccaggaggcatgatgggaccgagccctggcccctcgcctggctcggcccac
agcatgatggggcccagtcctgggcctggaacacccaacgcacctcatggcatgcatacc
caaggacaaagcgattactctcaggacagcatgtatcctatgcacaagtccatggaggga
acgatgaatgacaagacgatggcagacacgatgcactttggtcacatgaaaggagtgggg
atgaggtctctccacagtggcatggggcctcctcaaagtccgatggaccagcacagtcaa
ggatacatgtctccacatccttccccgatgggaatccacgagcacgcttctagtcccatg
tcaggaagcggaggtggacccacaccaccccacatgcctccctcccagtctgcacctatg
atgtccttggatcctcaggccggcatgcccagcatgtctgctatgggacaacaaggacga
ggaccttctgccttcagtcccgtgcagcttcagcagctcagagctcagattctcgcctac
aagattctggcccggggacaaccgctgccagataacctccagctggctgttcaaggcaaa
aggagcctacccacaatgcaacagcaacagccgcagcagcagcagcagcaggctcctggt
ggcagcctgtacagacctccaggcatgccaatggcacctttgggtggtcctcagtccagc
ccccttccagcaccacccatgcaaggcctcagtcagagtagcggacccaaaccgtggagc
gacggtcagggtggtgacggccaagcccctgcacagaagcacctgacgcctgttcctagt
ggccgcccatctccggcgccgcctcagaccccggctgtgcctacaggccccatgctgggc
agcgcagcggcaacccaccctccaggccagcaggtgtcccccatgctccaggtgccgcag
aagcagaaccgcatcacgccaatccagaagcctcagggtttggatccggtgggaatttta
caggagagagagttcagactgcaggctcggatcgcgcatcgcatccaggagctggaaagt
cttccgggatcgttgcctcctgacttacgaaccaaagctacggtggagctcaaagctctc
cgtctgctcaacttccagcggcagctgaggcaggacgtggtggcgtgtatgagacgggac
acgaccctggagacggccctcaactccaaggcttaccggcgcagcaagaggcaaactctg
agggaggctcgcatgacggagaagctggagaagcagcagaagctggagcaggagaagaag
cgccgacagaaacatcaggagtatcttaacagtatccttcagcatgccaaggactttaag
gattaccaccgttctgtgtctggaaaagtccagaaactcaccagagctatcgccaactgg
cacacgaacacggagcgggagcagaagaaggagacggagagaatcgagaaggagaggatg
aggaggctcatggcggaagacgaggaaggctacaggaaactcatcgaccagaagaaagac
aagcgtctggcttatttactgcagcagacggatgaatacgtggccaacctcacctctctg
gtgtacgagcacaaagctgctcaggctgccaaggagaagaagaggaggaagaagaggaag
aagaaggtggacggagactgtgaaggcaccagcgccattgggccagacggagagctgatg
gatgaaagcagccaaatgagtgagctgccagtcaaagtcattcagacggagacggggaaa
gttctgcaggggacggatgcacccaaatccagccagctggaggcttggctggagatgaat
ccaggttatgaagtcgccccgcgatccgacagcgaggagagtggctcggagtttgaggag
gaggaagaagatgagatggccaaggcagaaacggaagagaagaagaaacgtggtcccaac
ggagaagaagggaacgtgaaggaggccaaaaatatcatcgagacagccaaacaagatgtg
gatgatgagtacagcgttcccaccgggcagaccagctcccagtcctactacggtgtggcc
catgctgtcatcgagagggtggagaggcagtcctcgctcctgatcaacggcaccctcaaa
cagtatcagatccagggcttggagtggatggtgtcgctctacaacaacaacctgaacggc
atcctggctgatgagatgggccttggcaaaaccatccagaccatcgctctcatcacctac
ctgatggagcacaagaggctgaacggcccctacctcatcatcgttcctctctcgactatg
tctaactgggtctatgagctggataaatgggctccttctgtggtcaaaatagcttacaag
ggtactccgggtttgcgccgtggacttgtgccgcagctccgcagcgggaagtttaacgtc
ctactgaccacctacgaatacatcatcaaggacaagcacatcctggccaagatccgttgg
aagtacatgatcgtggacgagggccatcgtatgaagaaccaccactgtaagctgacccag
gtgttgaacacacactacgtggctccacgccgcctcctcctgaccggaacgccgctgcag
aacaagcttcctgaactctgggccttgctcaacttcctgctgcccaccatcttcaagagc
tgcagcacctttgagcagtggttcaacgccccgttcgccatgaccggagagcgggtggac
cttaacgaggaggaaaccatcctgatcatccgccgtttgcacaaagtgctccgcccgttt
ctgctccgcaggctgaagaaggaggtggagtctcagctgccagagaaggtggagtatgtc
ataaagtgcgacatgtctgcgatacagaaggttctgtaccgccacatgcagaaaggaatc
ctcctgaccgacggctcagagaaagacaagaagggcaaaggaggcgccaagactctgatg
aacaccatcatgcagctgaagaagatctgcaaccatccctacatgttccagcacatagag
gagtcttttgctgaacacctgggttatccgaatggcatcatcagcggacctgatttgtac
agagcgtctgggaagttcgagctgctcgatcgcatcttaccgaagctccaggccaccagc
cacagagttctgctcttctgccagatgacctccctcatgaccatcatggaggattacttc
ggttatcgcaacttccagtacttgcgcctcgatggaaccaccaagtcggaggaccgagcc
gctctgctgaagaagtttaacgaggaaggatctcagtacttcgtcttcctcctcagcacc
agagctggaggtctcggcctcaatctgcaggctgccgacacggtggtcatcttcgacagc
gactggaacccacaccaggaccttcaggcccaggatcgcgctcatcgcatcgggcagcag
aacgaggtccgagtgctccgtctctgctccgtcaacagcgtggaagagaagatcttggca
gctgccaaatacaagctgaacgtggatcagaaggtcatccaggcaggcatgtttgatcag
aaatcatcgagccacgagcgccgtgccttcctccaagccatcctagagcacgaggagcag
aacgaggaggaagacgaggtgccggatgacgaaaccctaaaccagatgattgctcgtaac
gaggacgagtttgagctgttcatgcgcatggacatggaccgacgtcgagaggacgccagg
aatccgaagcgtaagcctcgtctgatggaggaggacgagctgccctcgtggatcattaaa
gatgacgctgaggtggagaggctcacctatgaggaggaggaggagaagatgtttggcagg
ggttctcggtgccgtcgggacgttgactacagcgacgcgctgacagaaaaacagtggctc
cgggccatcgaggatggaaacctggaggagatggaggaggagatccggctgaaaaaacgc
aagcgcaagcggcgccaggacaaggacacgtccagcagagacaatggtgggatgaaggcc
aagaaaagacgtggacgtcctccagcggagaagttctcccccaacccgcccaaactcacc
aagcagatgaacaccatcatcgacacggtgatcaactacagagaaggctcaggaagacaa
ctaagcgaagtgtttgtgcagcttccatccaggaaggaactcccggaatattacgagctg
atcagaaagcccgtggacttcaagaagataaaggaacgagcaaggaaccataaatacagg
agtctgggagacctggagaaggacgtgatgctcctctgccagaacgctcagacctttaac
ttggagggatcccagatatacgaagactccattgttcttcagtctgtgttcaagagcgcc
agacagaagatcgccaaggacgaagagagcgacgatgacagcgatgaagatgatgatgac
gactatgactcagaggcagaggccaaggctgtgcgggtgaagatcaagctgagcagagac
ggccgcagccacgagaaaggcaagaagaggcagagccgggggaaggccaagccggtggtc
agcgacgacgacagcgacgaggaagataacgatcagtcagacaagagcaaaagtgacgac
gactga
DBGET
integrated database retrieval system
