Nothobranchius furzeri (turquoise killifish): 107386511
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Entry
107386511 CDS
T05163
Symbol
srrt
Name
(RefSeq) serrate RNA effector molecule homolog isoform X1
KO
K27103
serrate RNA effector molecule
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107386511 (srrt)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
107386511 (srrt)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
107386511
NCBI-ProteinID:
XP_015816429
UniProt:
A0A8C6PSR8
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Position
sgr11:complement(16785429..16793272)
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AA seq
878 aa
AA seq
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MGDSDDEYDRRRRDKFRRERSDYDRSREREDRRRDDWNDREWDRGRDRRSRGEYRDYDRG
RRERFTPPRHDMSPQQKRMRRDWDDHSGDPYRGGYDLGFGGGGPSYGPPQHWGHPDLHLM
QPHQGIPIQARLGNIHDLDLGPPPPIMKSFKEFLISLDDSVDETEAVKRYNEYKIDFRRQ
QMQDFFLAHKEEEWFRSKYHPDESSQLKAEAQSALHNRLHVFTFLLENSWFDNVSLDIEQ
APNIIRVLDAAVIKMEGGTDHDLRILDMPPEEEEDREKSASASAGAEPPKKEDIKTLAGD
GKPLVEKDQTEKEETDSAGADREVTADRDDIKEEGEKEAVKEEMPEPKKARRKRKRSEDS
DDEASASESDSDSDSNSNCSDKPAKKEEVEEKDEEEEEGDGECEEEKPKSEEEEEEEEQK
EEKKPKDDTPRPRPLHKTCSLFMRSIAPTISKAEIVALCRRYPGFLRVCLSDPHPERRFF
RRCWVTFDRSVNIKEICWNLQNIRLRDCELAPGVNRDLARRVRNVNGITQHKQVLRNDIK
LAAKLIHALDEKGYLWSNKTQEEGPNAELPAQNPILKNITDYLIEEVSAEEEELLGSGSG
MDTEENPKEGNAAEMTVEKDEKLAKVLDRLVLYLRIVHSVDYYNTCEYPSEDEMPNRCGM
IHVRGPIPPNRITQGEVQQWQKMMEEKLTPLFSLKEVLSEAEATKMGRKDPEEEVEKFVS
ANTQELGKDKWLCPLSGKKFKGPEFVRKHILNKHGDKIKEVKKEVVFFNNFLMDAKRPSL
PELKPPPPPAPGQGLLSPILPFPPQGPMGFGQPRPPLMGYGGPPYPPNQYGGGRGNNNNF
RGQGGYLGKPRNIRMSRGDPRNIIEYRDLDAPDDVDFF
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtgatgatgagtacgatcgcaggagaagggacaaattcagacgagagagg
agtgattatgatcgttcaagagaacgagaggaccgacgcagagatgactggaatgacagg
gaatgggataggggcagggaccgccgtagccgcggggaataccgggattatgatcgaggt
cgaagagagaggtttaccccacccaggcacgacatgagtccacagcagaaacgcatgaga
agagactgggatgatcatagtggagacccataccgtggggggtatgacttgggatttggc
ggtggggggccaagctatggcccgccgcagcactggggccaccccgacctgcacctcatg
cagccgcatcagggcatccccattcaggctcggcttggtaacatccatgacttggatttg
ggtccccccccaccaataatgaagagcttcaaggagttcctgatttccttggatgattct
gtcgatgagacagaagcagtcaaacgctacaacgagtacaagatcgacttccgtcggcag
cagatgcaggacttctttttggctcacaaagaagaagagtggttccggtccaaatatcac
ccggatgagtccagccagctgaaggcagaggctcagagcgccctacacaaccgtctgcat
gtcttcacgttcctgctggagaactcctggtttgataatgtgtccctggacattgagcag
gctccaaacatcatcagggttctggatgctgctgtgataaagatggaaggagggactgat
cacgatcttcgtattttggacatgccgcctgaggaggaggaggaccgtgagaagtctgca
tcagcttcagcgggagctgaacctccaaagaaggaagacatcaaaacattagctggtgac
ggcaaacccttagtggaaaaagaccaaactgaaaaggaggaaacagattctgctggtgca
gacagggaggtcacagcagacagagacgacataaaagaggagggagaaaaggaagctgtc
aaagaagaaatgcctgaacccaaaaaggcaagaagaaagaggaaacgtagcgaggacagc
gatgatgaagccagcgcctctgagagtgactccgattcagactccaactccaactgctcc
gataaacctgccaagaaggaggaagtagaggagaaagacgaggaggaagaggaaggagat
ggtgaatgtgaagaagagaaaccaaagtctgaggaggaggaggaagaggaggagcagaag
gaggagaagaagcctaaagacgacactcctagaccacggccgctgcacaagacttgttct
ctgttcatgagaagtatcgctccgacgatctccaaggctgaaatagttgctctttgtcga
cggtatcctggtttcctgcgtgtttgcttgtctgatcctcacccagagcgcaggtttttc
agacgttgctgggtgacctttgaccgtagcgtcaacatcaaagaaatctgttggaacctt
cagaacattcgtctgcgggactgtgagctggcaccaggggtgaacagagacctggcgcgg
agagtgcggaatgttaatggcatcactcagcacaagcaggtgctccgcaacgacatcaag
ctagctgccaagctcattcatgctttagatgagaagggctacctgtggagcaacaaaacc
caggaggaagggccaaacgctgagttgcccgctcagaacccgatcttgaagaatatcact
gattacctgatagaggaggtgagtgctgaggaggaggagctcctgggctcggggagtgga
atggataccgaggagaatccgaaggagggaaacgcagcagagatgaccgtggagaaggat
gagaaactggccaaggttttggaccgtctggttttgtatctgcggatcgttcattcagtc
gactactacaacacctgtgaatacccgagcgaggatgaaatgcccaaccgctgcggcatg
attcatgttcgtggaccgataccccccaaccgcatcacacaaggagaggtgcaacagtgg
cagaagatgatggaggagaagctgactcctttgtttagcttaaaagaagtcctgtctgag
gccgaggcaacaaagatgggtcgtaaggatccggaggaggaggtggagaagtttgtgtct
gccaacactcaagagctgggaaaagacaagtggctctgtcctctcagcggcaagaaattc
aagggtccagagtttgtgcgaaagcacatcctgaacaaacatggggacaaaatcaaagaa
gttaaaaaggaagtggtctttttcaacaacttcctgatggatgccaagagaccgtcacta
ccagagctaaaacctccaccacctcctgctccggggcaaggtttgctttccccgattttg
ccttttcctcctcagggtccgatgggctttggtcagcctcgtcccccactgatgggctac
ggtggccctccttacccgcctaatcaatatggaggaggcagaggaaacaacaacaacttc
cgtggtcaaggtggctacctgggtaagccacgcaacatcaggatgtcacgaggggatcca
cgtaacatcatcgagtaccgtgacctggacgcaccagatgatgtcgacttcttctag
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