Nothobranchius furzeri (turquoise killifish): 107386577
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Entry
107386577 CDS
T05163
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107386577 (zc3h12b)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107386577 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
UBA_N4BP1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
107386577
NCBI-ProteinID:
XP_015816541
UniProt:
A0A1A8V861
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Position
sgr11:complement(18326679..18341713)
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AA seq
846 aa
AA seq
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MTAWSMVEKLKMEKRPCREENIDSREVWHAADESEDGSSSESESEERQPWRAPVSSSSGC
KRREPLAVTKPHRQLCRSPCLDRPSFSQSSTVQDFREEDSSATPGIKSASEREYQSKMEF
ALKLGYSGEQVEAVLGKLGAAALINDVLAELVRLGNKVEPETQPCSSTATVIPRSPCVKE
NVSPDVSVEDDSVDTFDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKRHKDIT
VFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDS
DGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRP
VVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPLRSVADELRAFAKLSAVKTMSEGALVK
CGIGPAAVKGEGNSEAKRVAPKRQSDPSIRSVACEPPEALSVVRKSETNSVPSLVSALSV
PTMQPAKSHAAGALNTRSASSPVPGSLQFGHSSLEHMSSVQYPPILVTNSHGASVTYSEQ
FPKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHVYQRNPSHCPESCLSHSNSD
SFSSYGDMYPSSVDSSLEESLKGQQQAPAQSRMQAFSQGFRHEALSRVQSYGPEEPKQCL
RKHPGSHLALHIQHAAVGARSSCPGDYPLTQNVLPPLSSQPTRSLGMTRMDSISDSRLYD
SNPMRQRRPPLCREQHASWDPLPCGNESFGYHSYPLSNSLMPCCERVMVRSMPDKMEQIW
NSPWETPSAAEHQERYVIPDHQYQTYRNLCNIFPAYIVHSVMEKNPHLTDPQQLAAVIVT
RLKSGH
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgcagggaggag
aacattgactcgagagaggtctggcatgccgctgatgagtctgaggatgggagcagctcg
gagagcgagtcagaggagcgccagccgtggagggctccggtgagcagcagcagcggctgt
aagaggagggagcccttggctgttacaaaaccccaccgtcagctctgccgctccccatgc
ctcgaccggcctagcttctcccaaagtagcactgtgcaagattttcgagaagaggactcc
agcgcaacaccgggcatcaaatctgccagtgagagggagtaccaatcaaagatggagttt
gctttgaagttgggttactcgggagagcaggtggaggcggtgctcggcaagttgggggct
gcggcgttgatcaacgatgtccttgctgagttggttcggctcggaaacaaagtggagccg
gagacgcaaccttgcagcagcacagccacggtaataccgcgatccccctgtgtgaaggag
aacgttagtccggacgtttcagtggaagacgactccgtggatacttttgataacctcagg
cccatcgtcatcgacggttcaaacgtggcaatgagccacgggaacaaagaggtgttctct
tgccgtggtatccagctcgctgtagagtggtttttggagaaaagacacaaagacatcact
gtgtttgtcccagcctggagaaaggagcaatcaagacccgacgccctcatcacagaccaa
gaaattttgcgcaaacttgaaaaggagaagatcctggttttcaccccatctcgaagagtt
cagggcagaagagtggtgtgctatgatgatcgcttcatagtgaagctggcgtttgattct
gatggaattatcgtgtcaaatgacaactacagggaccttcaaaacgagaagccagagtgg
aagaagttcatagaggagcgtctcctgatgtattcatttgttaatgacaagttcatgcca
cctgatgatccattgggaagacatgggccaagccttgaaaatttcctccgcaagcgaccc
gtggttccagagcacaagaagcaaccttgcccctatgggaaaaagtgcacatacggacat
aagtgcaagtactaccaccctgagcgtgtgaaccagccgctgcggtctgtggccgatgaa
ctgcgagcctttgccaaattatctgcagtcaaaacgatgagcgagggggctttagttaaa
tgtgggataggtccagcagctgtgaagggcgagggcaactctgaagccaagcgtgtggca
cccaagcgccagtccgatcctagcattcgctcggtggcttgcgaacctccagaggcgctc
tctgttgttaggaagtctgagacaaattcagtgccttccctcgtgtctgctctcagcgtg
cccaccatgcagcctgccaagagccacgcagctggggccttgaacacacgatctgccagc
agtccagttccaggttctttgcagtttggacacagttccctggagcacatgtctagtgtc
cagtatccccctattttagttaccaacagtcacggcgcctcagtgacatatagcgaacag
ttcccaaagtacgactctgtcagcgatcatggatactactcactccacagtgacttctct
aacatgagcatgagcagcatgcacaacgtagacagtttctgtagcatggagcacgagcat
gtgtaccagaggaatcccagccactgccctgaatcctgcctcagccactccaacagtgac
tccttctcctcttatggggacatgtacccaagctctgtggacagcagcttggaggagagc
ctcaaagggcaacagcaagctcctgcacagagtaggatgcaggctttctctcaaggtttt
cgacacgaagcgctctctagagttcagagttatggacccgaggagcccaaacagtgtctc
cggaagcatcctggatctcatctggcgctgcatattcagcatgctgcagtgggagcccgg
tccagctgtcccggggactacccactcactcagaatgtccttcctcccttgtcctcgcag
ccaacacgctctctaggtatgactcgcatggacagcatctcggactcgaggttgtacgac
agcaaccccatgaggcagaggcgaccgccgctgtgccgcgagcagcacgcgagctgggac
cctctgccttgcgggaacgagtcttttggatatcattcatatccgctcagtaacagcctg
atgccatgttgcgagcgggtgatggtccgcagcatgccagacaaaatggaacaaatctgg
aactcgccgtgggagaccccatctgcagcagaacaccaagagcggtatgttataccagat
caccagtatcaaacctacaggaacctttgtaacatctttcctgcctacattgtccactcc
gtcatggagaagaacccacatttgacagatccacagcaactggctgctgtcattgttacg
agactgaaatcaggccactga
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