KEGG   Nothobranchius furzeri (turquoise killifish): 107386696
Entry
107386696         CDS       T05163                                 
Symbol
larp1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nfu03019]
    107386696 (larp1)
Messenger RNA biogenesis [BR:nfu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107386696 (larp1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 107386696
NCBI-ProteinID: XP_015816737
UniProt: A0A9D2XPU5
LinkDB
Position
sgr11:23423258..23470023
AA seq 1088 aa
MATQVEALLPGNPLATAEEHGKMIDGEPEELEGSRDEGAQQLQTGVTDSSSVQGGTTGAE
EQTSKRAVEQSKDGGDSEGKQSEEGVKDNSRKEFTEAPPPKVNPWTRKMNAVTVVSVNGQ
AHTELTGPAKVVKAGNPPKGRRGGKVGDFGDTNSWPTPGEIATKDMQMEAVTRPVSCPST
HRQVRDSWRTSGPRRITAKKELKEKRESNEESKENLKAKSDDSGEEKNGDDDSQKNGSKR
KGNKQKWVPLMIEVNSEGPRERSASRNNSRQNEHPRLPPNARNDLRDWHSQKYEREWRDD
HDEVSSVKSEGAPFRGGFRGRGRGRGRGRGRGRGGGHGHYDYHFGYKSYDVKDGPYSQKF
NSSVTYYYDNMSSSDLYTVDQDLLKDYIKRQIEYYFSLDNLERDFFLRRKMDQEGFLPIG
LIASFHRVQALTTDVNLIIEALKGSKEVEIIDMKIRRKEDPEKWPLPGLMMPNHTHTDFS
QLINCPEFVPRQMSEERRGSPRASTPVQQLTKTEPDISNLKTMPKGLSASLPDLDSESWI
EVKKRPRPSPARPKVPVLQQKEKDESLRSLVPRPGSSPSPVVSGNKDGAEQDEPEELDFM
FDEEMEQIDGRRNTFTDWSDEETDGELDDNDINKILIVTQTPPYLRKHPGGDRTGQHTSR
AKLTSELAKVINDGLFYYEQDLWEDNFEPEYATIKQEVENFKKVHLISREEFDCLTPEPP
VDPNQEVPPGPPRPQQIPTDALANKLFGAPEPSSTARSLPTTVPESPNYRSARTPRTPRT
PHRKDPTMTPRFYPVVKESRPVDAKTPRKRKTRHSSNPPLECHVGWVMDSREHRSRTASV
SSNASPSEGTPALSNIGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGI
GQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLVVEDGKEGYRYGLECLFRYYSYGLEKKF
RPDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKTLEIDPKLQEHLSKFKRLEDFRI
DPPMEEGGRKRHASSGDGRRRHPSQSSSRPHSQASGGSAPASKDVAKPPSQKAPAHSADP
TPDAKALK
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggccactcaggtggaggctctcctgcccggcaacccgcttgccacagcggaggagcac
ggtaaaatgatagacggtgagccggaggagttggagggcagtcgggatgagggggcccag
caactgcagactggtgtcaccgatagcagctccgttcagggagggaccaccggcgcggag
gagcagacctccaaacgggcggtagagcagagcaaagacggaggtgacagcgaaggcaag
caaagcgaggagggtgtaaaagacaacagcaggaaggagtttaccgaagctcccccgccc
aaggtgaacccgtggactaggaaaatgaatgcggtgaccgtggtcagcgtgaacggacaa
gcgcacaccgaactgactggtccagccaaggtggtgaaagcagggaatcctcccaaaggc
aggcgtggaggaaaggtgggagattttggtgacaccaacagttggccgaccccaggagag
atagcgactaaagacatgcagatggaggcagtgacacggcccgtgtcctgcccgtcgact
cacaggcaggtcagggactcgtggaggaccagtggtcctagaagaataacagccaagaag
gagttgaaggagaagagagagagcaacgaggagagtaaggagaacctgaaagccaagtct
gacgactctggagaggagaagaacggtgacgatgactcccagaaaaatggctctaagaga
aaaggaaacaagcagaagtgggttcctctgatgatcgaggtgaattctgagggccccaga
gagcgctcggcctccaggaacaacagcagacagaacgaacacccccgcctgccccccaac
gccaggaacgacctcagagactggcacagccagaagtacgagcgggagtggcgagacgac
cacgacgaagtgtccagcgtaaagagcgagggggcacctttccgtggagggttcagaggt
cgtggacgcgggagaggaaggggacgaggtcgaggacgaggcggaggacatggtcattac
gactaccacttcggctacaagtcctacgacgtgaaggacggaccgtacagccagaagttc
aacagctccgtcacctactactatgacaacatgagcagcagcgatctgtacaccgtggac
caggacctgctgaaggactacatcaagaggcagatagagtattatttcagtctggacaat
ctggagcgggactttttcctgcggaggaagatggatcaggagggcttcctgcccatcgga
ctcatcgccagtttccacagagttcaggcgctcactacagacgtcaacctcatcatcgag
gctttaaagggcagcaaagaggtggaaatcatcgacatgaagatccggcggaaggaagac
ccagagaagtggcctcttcctggtctgatgatgcccaaccacacgcacaccgacttctcc
cagctcatcaactgccccgagtttgttcccagacagatgtctgaagagcgcagagggtct
cccagagcctccacgccagttcaacaactgaccaagactgaaccagatatctccaacctc
aagaccatgcccaagggcctctccgccagtctccctgatctggactccgagtcctggatc
gaggtgaagaagaggcccagaccctctccagccagaccgaaggtccctgtgttgcagcag
aaagaaaaggacgaatctcttcggtctctggttcctcggcccggctcctctccatcccct
gtcgtctcaggaaataaggacggagcagagcaggacgaacccgaggagctggacttcatg
ttcgatgaggagatggagcagatagacggacgccgcaacaccttcaccgactggtcggac
gaggagacggacggtgagctggacgacaacgacatcaacaagatcctgattgtgacgcag
acgccgccctacctgagaaaacatccggggggcgaccgcaccggtcagcacacatcgcgc
gccaagctgaccagcgagctggccaaagtcatcaacgacgggctcttctactacgagcag
gacctgtgggaagacaacttcgagcccgagtacgccaccatcaagcaagaggtggagaac
ttcaagaaggtccacctgatcagccgtgaggagttcgactgtctgacaccagaacctccc
gttgaccccaaccaggaggtcccccccgggccgccgcggccccaacagattcctacagac
gctctagccaacaaactctttggagcccccgaaccctcgtctacagcccgctcgctcccc
accacagtgcccgagtcacccaactaccgcagtgcccggacgccccgcacgcctcgcacc
cctcaccgaaaagacccaaccatgacgccacgcttctacccggtggtgaaggaaagtcgt
ccggttgacgccaagacgcccagaaagaggaagacccggcacagctcaaacccgccgctg
gagtgtcatgttggctgggtgatggactcgagagaacatcgctcccgcaccgcctccgtc
agctctaacgccagcccgtcagagggcacccccgcccttagcaacatcggctgcaccccc
cagtccctccccaagttccagcacccgtcgcacgagctgctcaaggaaaacggcttcacg
caacacgtttaccacaagtaccggcggcgctgcctcaacgagcggaagcggcttggaatc
ggccaatcgcaggagatgaacacgctcttccgcttctggtcgtttttcttgcgggatcac
ttcaacaggaagatgtacgaggagttcagacagctggtggtggaggacgggaaagaaggt
tacaggtacggtttagagtgcttgttcaggtactacagctacggtctggagaagaagttc
agaccagacatctttaaggacttccaggaggaaaccgtcaaagactacgaagccggtcag
ctttatggactggagaagttctgggctttcctcaaatactccaaagccaagactttggag
atcgacccgaaactccaggagcacctgagcaagtttaaacgactggaggatttcagaata
gatccaccgatggaggaaggaggccggaaaagacacgcgtccagtggggacggtcgccgt
cgccatccctcccagtcctccagccgacctcacagccaggcgagcggaggctccgcccct
gcctctaaggatgttgccaaacccccctcccagaaagcccccgcccacagcgctgatccc
acaccggacgccaaagctctgaaataa

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