Nothobranchius furzeri (turquoise killifish): 107386803
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Entry
107386803 CDS
T05163
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107386803
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107386803
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
107386803
NCBI-ProteinID:
XP_015816915
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Position
sgr11:complement(16881544..16892514)
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AA seq
1019 aa
AA seq
DB search
MENLTPEQWREIMNKKMRFRPELLTAIQEGKIELLCGLLKTGDGIVRQLDESEDRQWREA
LNLSIRLGSEDGMDALLQGVKFDFRQIHEALLVAVDTNQPKVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSIDNSQFAPGVTPLTLACQKDLYEIVTMLTQKGHVIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLSAFSLSRELRKLSQKEPEFKPQYL
SLEEICQEFAVELLGMCRNQSEVTTILNSCGDDQQDASEEQAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTTWKLLVSVGIFLTMPFLCLIYWIAPKSKAG
KLLKIPVIKFILHSASYMWFLITLLGESITMEMYRDTFASREQNILHNSFHMVWVVGFFW
YECKEVWIDGLRSYFRDWWNCLDVMVLSMYLASFTLRVLIIFKGFFLCPDESSSEDCAYF
TQTVRDQWHQEDPQLISEMLFAVTSLLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNIYVPYVASPQLGRFNETFRFLFWTMFGMANPDYVDMPQFVLAEF
VGRVLYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNVIPSPKAAFYILRGIFRRICCCCSKSEQKYPPLASVPGDEGLEDSQVPYRQQVIRAL
IQRYIESARREFEETKRKDIGNRITELNKAVSRMNAEMKVVQMADGHVTNDALIKDGSSV
LGKYITGAKNNFRGFHSQHDQKNTSLKVSVHHGMGRIGEEFDAQQETNTPPSQVGEGGEE
ETKQVTDCEVAKMEEGRATSELGDETETEKQEKEDTSENCDNTLTEEVLDGTSFNDVEEK
ETEEATQVDVDVRDEEINSGEETHETKAERTESAEINCEQKIMKKTIRFKDMELKDKEVE
TGWMEERRSDVEKSHLRGRDGATGKKKVIPSPTGSSSSHDTGFGSQEGEGSIDGAPVKP
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagagcaatggcgcgagataatgaacaagaagatgcgcttccgc
ccggagctgctcaccgccatccaggaagggaaaatcgagcttctctgtggactgctgaag
acgggcgatggcatcgtccgccagctggatgagtctgaggatcggcagtggagggaggct
ctcaacctctccatccgcttgggcagtgaagatggaatggatgccctcctgcagggggtc
aagtttgacttcaggcagattcacgaggccctcctggttgctgtggacaccaaccagccg
aaggtggtgaagcgtctgttggatcgtttagatcaggaaaaaggcaacaagatggacgtc
cgatcattctctcaggccatctttgaccgctctattgacaactctcagttcgcccctggg
gtgaccccgttgacattagcatgccagaaggatctgtatgaaatagtcactatgctgact
cagaaaggccacgtcatcccgtggccacacaagatctcctgtgcctgtctggagtgtcgc
aatggccgccagtacgacttgcttaagttctccttgtctcgtatcaacacctaccgtggc
attgccagccgggcgtacctgtccatcacctctgaggatgccatgctgagtgctttcagt
ctcagcagggagctccgcaagctgtcccagaaagagccagagttcaagcctcagtatctg
agcctagaggaaatctgtcaggagtttgctgtggagctgctgggaatgtgtcgcaaccag
agcgaggtgaccaccatcctgaacagctgtggagatgatcagcaggatgcctcggaggag
caggcctttgaggagggaatccccaacctgtcacgtctgagacttgccgttaactacaac
cagaagcagtttgtggcacacccaatctgccagcaggtcctttcatctatttggtgtgga
aacctggcaggatggagaggcagcaggacgacctggaagctcttagtctctgtcgggatc
ttcctaaccatgcccttcctttgcctcatctactggattgcgccaaaatcaaaggcagga
aagttgctcaagattcctgtgatcaagtttatcctccattctgcatcctacatgtggttt
ctcatcactttgctcggagagtccataactatggagatgtatcgggacacgtttgcgtct
cgggagcaaaacatcttgcacaactccttccacatggtgtgggtggttgggttcttctgg
tatgagtgtaaggaagtgtggatcgatgggctgcggagctattttcgagactggtggaac
tgcctggatgtgatggttcttagcatgtacttggcatcctttacgctgcgtgtgctcatc
atcttcaagggtttcttcctctgtcctgatgagagtagcagtgaggattgtgcctacttc
actcagacagtgcgcgaccagtggcaccaggaggacccacagctgatttccgagatgctg
tttgctgtaaccagcttgctgagcttcacgcggctcgcctacatcctgccagcacatgag
tctctgggaacgctccagatctccatagggaagatgattgatgacatgatgagatttatg
ttcattctgatgatcatcgggacagcattcctctgtggcatcaacaacatttatgttcct
tatgtcgcctctccacagcttggcaggtttaatgagaccttccgtttcttattctggacc
atgtttgggatggccaacccggactatgtggacatgcctcagtttgttctggccgagttt
gtaggacgggttctgtatggcatcttcactctggtcatcgtgatcgttctcctcaacatg
ctcatcgctatgatcaccaactcctttcagaaaattgaggacgacgcagatgtggagtgg
aagtttgcccggtcgaagctgtatctcagttacttcagagagggcctcaccatgcctgtg
cctttcaacgtcatcccttcaccaaaagctgcattttacattttaagggggatcttcaga
cgaatctgctgctgctgttctaaatcagagcaaaagtatcctcctctagcttctgtgcct
ggtgatgaagggttggaggacagccaggtaccttaccgccagcaggtgattagagctctg
attcagcgctacatcgagtcagctcgcagggagtttgaggagaccaagagaaaagatatt
gggaatcggatcaccgagctgaacaaagccgtctcaaggatgaatgctgaaatgaaagtg
gtccagatggcggatggacacgttacaaacgatgctttgatcaaagacggctcctctgtg
ttggggaaatacatcaccggtgccaagaacaactttagaggttttcacagccagcatgat
cagaaaaacacatcacttaaagtgtcagtgcaccatggaatgggaaggataggtgaggag
ttcgacgcacagcaagagacaaatacaccaccaagtcaggtgggtgaaggtggagaagag
gagacgaagcaggtgacagactgcgaggtagccaaaatggaggaagggcgagctacttct
gagctgggagatgagacggaaactgagaaacaagagaaggaagacacaagtgaaaactgt
gataacactttgacagaagaggtcctagatgggacaagcttcaatgatgtagaagaaaag
gagacagaggaggctacacaggtggatgtagatgttagagatgaagagattaactcaggg
gaagaaacgcatgagacaaaagctgaacgcacagaaagtgctgaaatcaactgtgagcaa
aaaatcatgaagaaaacaatcagattcaaagacatggagctgaaagacaaagaggtggag
acaggatggatggaggagagaagatccgacgtagaaaagtctcatttgagagggagagat
ggagcgactggaaaaaagaaagtgattccatctccaacaggaagcagcagctcacacgac
acgggctttgggtcacaggagggagaaggatccatcgacggtgcgccagtaaaaccataa
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