Nothobranchius furzeri (turquoise killifish): 107386917
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Entry
107386917 CDS
T05163
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03030
DNA replication
nfu03410
Base excision repair
nfu03420
Nucleotide excision repair
nfu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107386917 (rfc3)
03410 Base excision repair
107386917 (rfc3)
03420 Nucleotide excision repair
107386917 (rfc3)
03430 Mismatch repair
107386917 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nfu03032
]
107386917 (rfc3)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107386917 (rfc3)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107386917 (rfc3)
DNA replication proteins [BR:
nfu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107386917 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
107386917 (rfc3)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
107386917 (rfc3)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107386917 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
107386917 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
ABC_tran
DUF2247
AAA_33
ATPase_2
DUF4646
Motif
Other DBs
NCBI-GeneID:
107386917
NCBI-ProteinID:
XP_015817083
UniProt:
A0A1A7Z9Z7
LinkDB
All DBs
Position
sgr11:32128241..32133170
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLGKLDFHKEQATQLKHLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTVVAPSKKKIEINTIASNYHLEVNASDAGNQDRVVIQELIKTVAQSQQ
IQSSTQKNFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRIILCSTSTSKVIEPIRSRCL
AVRIPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SVDQDVPEADWEVYLRDTASAIVSQQNPQRLLEVRARLYELLIHCIPPDIIMKGLVRELL
SNCDGQLKTEVAQLAAYYEHRLQLGSKAIYHLEAFTAKFMALYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggataaatatcgaccgacttccctcggaaaactagactttcacaaa
gaacaagcgactcagctgaaacacctggttcagtgtggcgacttcccacacctgttggtg
tacggcccgtcaggcgcaggaaagaagacccgcatcatgtgtctgctgagagagctgtat
ggaccaggagtggagaagcttcgcattgagcatcagactgttgtggctccatcaaagaag
aaaattgagattaacacaatagccagcaactatcacttggaggtcaatgcaagtgatgca
ggaaaccaggaccgcgtggtgatccaggagctgattaaaaccgtggctcagtcccagcaa
atccagtcaagcacccagaaaaacttcaaagtggttttgctaaccgaggtggacagactg
acaaaagatgctcagcacgctttgcgccgcacgatggaaaagtacatggcgacctgccgc
atcatcctctgctcaacatccacctctaaagtcatcgagccaatcagaagccgttgtttg
gctgtcagaattcctctgccaagcacagaggaggtctgcagcgttctgacatcagtctgt
aaaaaggagggtctgctcctgccccccgagctggccaagcaaatcagtgagaagtctggt
cgtaacctccgcaaagccctgctgatgtgtgaggcctgcagagtgcagcagtacccgttc
tcggttgaccaggatgtcccggaggcggactgggaggtctacctgagagacaccgccagt
gccattgtcagtcagcagaatccccagaggttgttggaggttcgagccaggctgtacgag
ctgctgattcactgcatccctcctgatattatcatgaagggtttggtgagagaactgtta
agtaactgtgacgggcagctgaagaccgaggtggcccagctggctgcttactatgaacac
cgactgcagctgggcagcaaagccatctaccacctggaggctttcacggccaagtttatg
gccttgtacaagaagttcatggaggacggtctagatgctatgatgttctga
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integrated database retrieval system
