Nothobranchius furzeri (turquoise killifish): 107386947
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Entry
107386947 CDS
T05163
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00562
Inositol phosphate metabolism
nfu01100
Metabolic pathways
nfu04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
107386947 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
107386947 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107386947 (synj1)
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
107386947 (synj1)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
107386947 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
107386947
NCBI-ProteinID:
XP_015817128
LinkDB
All DBs
Position
sgr11:33786693..33833238
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AA seq
1669 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRTREECLMLESGAVAVLSAAEKDAIKNTYTKIFDAY
GILGVLRLNLGDSMLHSLVVVTGCSSVGKVQDSEVFRVTQTDFISLKNDPGDEDRIAEVR
KVLNSGHFYFAWSASGVSMDLSLNARRRILEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACIFSRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DKVSSFIQIRGSIPLFWEQPGIQKKFIKGVLLHLNKNRHPSGRDEKRHLVGSHRVKLSRG
FEANAPAFERHFTALRRLYGKQVIINLLGSKEGENMLSKAFQSHLKASEHANEVKMVNFD
YHQNVKGGKTEKLSSVLKPQLGKFLEECGFFYYTGETGILRSQGGTLRTNCLDCLDRTNS
VQAFFALEMLTRQLEQMGLTEKPQLVARFQEVFRTMWSMNGDSISKIYAGTGALDGKAKA
GKLKDGARSVTRTIQNNFFDTSKQEAIDILRLGSTLNSDLADKARALLTTSSLYVTEPVL
QSASPRVLLGMCQNYHKYTKPKQIRVCVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPKKA
GHPEFQEGKGNPIDIFAIGFEEMVELNAGNIVSASTTNQKLWAAELQKNISRDHKYVLLA
SEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGGVAIRLLFHTTSICFVCSH
FAAGQSQVKERNDDYNEIARRLSFPMGRLLYSHDYVFWCGDFNYRISLPNEEVKDLIKQQ
NWDALTAGDQLLEQKNTGMIFRGFIEGMLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRIL
WKRRKWNFSKTAEEMNVVGVASTSGEAEEDPDYSWSPGSLKYYGRAELKTSDHRPVVAVI
DVDILEVDPEARHQVYKDVIALQGPPDGTILVSLCTSGPDDYFSDELIDELLDKFANFGE
VILIRFVEEKMWVTFLEGYSALAALSLSASTVLDKMIDVRLRSPGWIRSLEEEMSVERIC
GSIPTSSSSTLLAEDVYVGDDDFEMEGEVDEEVEDILPQHLLPGTGSAPGSSPLPSPRSS
PCPSPTQGEPSAPSRPTRAQPTRPSQAALSVSTQSEEPPGPPVDFQPGAPTGPGLEPKRA
PPPRPNAPPARPAPPQRPPPPSGGLSPQPVRKDSAGPKSPALPRPDAPAGRGQAATGAPG
PSRPNIPPRAGVISVTPQSRPQPPSHPGAPRPIPEVHPGAPRPIPDTHPGAPRPIPSAQT
KPPDLPMGPPPSGPPPAVNPQVQPQPAPPSAYPQLPPPMQPTLLAPLQPQQASTPPASTL
PAAAAPTVPPAGPQQSLPSPKPPPRSRSSHTLQPDAAKSETAPAAQTNGLNGFQKEAQQR
PDPFDALTSEFLSSSSSRHTTQSLNRGSSLRPPPSMPPSAFSSCTLPASIPIQSSTLSDL
QLLDTSSLSSPSPLLLPPPAPSRSRSQEMLRASPSSFLSEPLPVRPSSTNPFTGSLVQQQ
QRRSLTPDFSLQHQTPTADPPRTQLSLRQPLTPIPAPTPQPNKTTFPFEPSPPALAFPLA
PPSSLPPTFPPRSQPPPSSTRPWVTFDDDSNLKPLTKTQQNPVFPSTPVVSQTQPSCAVF
ALEPDWLFAPSAVFSALPPPVPTRTATRDPNPTESNANDNFFPRESTDR
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaaagggtatcgcatttaccacaagctggacccaccgccttatagtgtg
atagtggagacccggaccagggaggaatgcctcatgttggagtcaggagccgtcgctgtt
ctgtcggcagcagagaaggacgccattaaaaacacgtacaccaaaatatttgatgcctat
ggaattcttggtgtcctccgattaaacctaggcgactccatgctccacagcctggtggtt
gtaacgggatgcagctctgtggggaaggtgcaggattcagaagttttcagagtcacacag
acagacttcatatcgctgaagaacgatccaggagacgaggaccggatcgccgaggtgcgc
aaggtccttaattcaggtcacttctactttgcctggtctgcctctggggtcagcatggat
ctgagtcttaacgcacgccgcaggatactagaagacactacagacaatcgcttcttttgg
aaccagtcgctgcacctgcatcttaagcattacggagtcaactgcgacgactggctgctg
aggctgatgtgcggcggagtggagatcaggactatctacgcaggccacaaacaggccaag
gcctgcatattctctcggctcagctcggagagagccggcacgagattcaacgtcagggga
accaacgacgatggacaggtggccaactttgtagagactgaacaggttattttcctggat
gacaaagtctcatccttcatccagatccggggctccattccacttttctgggagcagcca
ggaatccagaaaaagttcattaagggtgttttgttgcacctcaataagaaccgacaccct
agtggacgggatgaaaaacgccacctggtgggttcgcaccgtgtcaaactctcacggggc
tttgaagcaaacgcgccagcttttgaaagacacttcactgcactgaggaggctgtacgga
aaacaggtgatcattaacctacttggaagtaaagaaggagagaatatgctcagcaaagca
tttcagagtcacctaaaggcatcagagcatgcaaacgaagtgaagatggttaactttgac
taccatcaaaacgtgaagggcggcaaaactgaaaaactcagcagcgtcctgaaaccccag
cttggcaaattcttagaggagtgtggcttcttctactacactggggaaacaggaattctt
aggtctcagggaggaaccctcaggaccaactgcttggattgtttggatcgaaccaacagc
gttcaggccttctttgctctcgagatgctcaccagacagctagagcagatgggtctgacg
gagaagccacagctggtggcccggtttcaggaggtttttaggaccatgtggtctatgaac
ggtgactccatcagtaagatctatgcaggcaccggtgccctggatgggaaggctaaggcg
gggaagctgaaagacggagctcgatctgtgacgcggaccatccagaacaacttcttcgac
acttctaagcaggaggctatagacatcttgaggctgggctccacgttaaacagtgacttg
gctgacaaagctcgggccttgctcaccacttccagtctttacgtcactgagcctgtctta
caatcagcctctccaagagtgttgctgggaatgtgccagaactaccacaaatacactaag
cccaagcaaatccgagtgtgtgtcggcacctggaacgtcaacgggggtaaacagtttcgg
agcatcgcttttcggaaccaaactctgaacgactggctgctggacgctcctaaaaaggcc
gggcatcccgagttccaggaaggtaaaggtaaccccatcgacatcttcgccatcggtttt
gaggaaatggttgaactgaatgccggcaacattgtcagtgccagcacaaccaatcaaaaa
ctgtgggcggctgaactccagaaaaacatctcaagggatcacaagtacgtgctgctggcg
tcagagcagctggtgggcgtgtgtctgtttgttttcatccgcccgcagcacgcgcccttc
atcagggacgtggccgttgatacggtgaaaactggaatgggcggggccacgggtaataag
ggaggcgtggccatccgtttgctgttccacaccaccagcatctgcttcgtctgttcccac
ttcgctgccggtcagtcgcaggtcaaagagagaaacgacgactacaacgagatcgctcgc
agactcagcttccccatgggacgtctgctgtactcgcatgattacgtgttctggtgtgga
gacttcaactatcggatcagtctacccaacgaggaggtgaaagatctgatcaagcagcag
aactgggatgctttaacagctggtgatcagttgttggaacagaagaatactggaatgatc
tttcgaggtttcattgaggggatgttagattttgccccaacttataagtacgacctgttc
tctgaggactatgacaccagtgagaagtgccgcacgccggcctggactgaccgcatactt
tggaagaggaggaagtggaacttcagcaaaacagctgaggagatgaatgttgtaggggtc
gcctctacatctggggaggctgaggaggatccagattacagctggagccctggcagtctg
aagtactacggcagggctgagcttaagacctctgaccacagaccagtggtggcggtaatc
gacgtggacatcctggaggtggacccggaggcccgacaccaggtctataaggacgtcatc
gccctacaggggcctccagatggcaccatcctggtgtcgctctgcacatctggacctgat
gactacttcagtgatgaactcattgatgagctacttgataagtttgctaactttggagag
gtcatcctcatcaggtttgttgaagagaagatgtgggtgaccttcttggaaggttattct
gctctggctgcactctctctcagtgcatcaaccgtcctggacaagatgatagacgtccgc
ttgaggagtccaggctggatcaggagtctggaggaggagatgagtgtagaaaggatctgc
ggaagcattcccacgtcgagtagctccacgctgctcgctgaggatgtgtacgtgggtgat
gacgattttgagatggaaggtgaggtcgacgaggaggtggaagacatccttcctcagcac
ctgctgcctggaaccggctctgctcccggatcctcccctcttccgtctccacgcagcagt
ccttgcccctcccctacccagggagagccctctgctcccagcagacccactcgtgcacaa
cccactcgaccgtcacaagccgctttaagtgtgtccactcagagcgaggaacctccaggg
cctcctgttgacttccagcccggtgctccgacaggtccaggcctggagccaaaacgggct
cctcctccccgcccaaacgccccaccggccagaccagctccgccccaacgcccaccacca
ccctcaggaggcctgagtcctcagccagtcagaaaggactctgcaggaccaaaaagtcct
gctctccctcgtccagatgctcctgcaggtcgaggccaggcagcaaccggagctcctgga
ccttcacggccgaacattcctcctcgagctggggtgatcagtgtgacccctcagtctcgc
ccacagcctccatcccaccctggagcaccaaggcccatccctgaggtgcatcctggagca
cctcgtcctattccagacacccaccctggagccccgcggccgattcccagtgcccagacc
aaaccgcctgacctgccaatgggccccccaccatctggaccccctcctgcagtgaatccc
caggtccagcctcagccagctccaccttccgcttaccctcagctcccaccaccaatgcag
cccacgctcctggctcctctgcagccgcagcaggcctccacaccaccggcatcgactctg
cctgctgcagctgctcccaccgtcccccctgctgggcctcagcagagcctaccctctcct
aaacctccacctcgttcccgctcgtctcacactctccaacccgacgccgccaagtctgaa
acggccccagctgcacagacaaacggactgaatggatttcagaaagaagcacaacagagg
cccgaccccttcgacgctctcacatctgaattcctttcctcctcatcctcacgccacacc
acccagtcgctgaaccgaggatcctctctgcgtcctccaccctccatgcctccatctgca
ttttcctcctgcaccctccctgcatccatccccatccagtcctctaccttgtccgacctg
cagctcctggatacgtcttcgctgtcctccccgtcacctctgctcctgcctcctcctgcc
ccgtctcgaagtcgctcccaggagatgctgcgcgcttcccccagcagcttcctgtctgag
ccgctccctgtgcgacccagcagcaccaaccccttcacgggctctctggtgcagcagcag
cagcgccgctcgctcactccggacttctccctccagcatcagaccccaacagctgaccct
ccgagaacccagctttccctacgtcagccactcacccccatccctgctccaaccccccag
cctaataaaaccacattcccgttcgaaccctctccccctgcccttgctttccccctcgct
ccaccttcctctctccctcccactttcccacctcgcagccagccacccccctcatcgacg
aggccgtgggtcacgtttgacgacgattcgaacctgaaacctctgaccaaaacacaacaa
aaccccgtctttccctccactcccgtcgtgtcccaaactcaaccatcctgcgccgtgttc
gccttggagcccgactggttatttgctccctctgcggttttctccgccctgccccctccc
gtcccaacccgaactgcaaccagggacccaaaccccacggagagcaatgctaacgacaac
ttctttccccgggagtcgacagacagataa
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integrated database retrieval system
