Nothobranchius furzeri (turquoise killifish): 107387008
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Entry
107387008 CDS
T05163
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfu03009
]
107387008 (ddx52)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107387008 (ddx52)
Ribosome biogenesis [BR:
nfu03009
]
Eukaryotic type
90S particles
Helicases
107387008 (ddx52)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Ribosomal_S7e
DUF2415
Motif
Other DBs
NCBI-GeneID:
107387008
NCBI-ProteinID:
XP_015817228
UniProt:
A0A1A7ZS14
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Position
sgr11:36372982..36378105
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AA seq
647 aa
AA seq
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MDTFELFRKLGAGAKFDLKRFGQDAARFKVSRSQGEENTSDRLSVIDYFGAGSANGAQSD
EEGSGDNEKGGRRKRKEEVKDVKLKKKRAKRNQGELEAGGRQPNKESSVTWTSSLEENQS
DGKEKSSLRRLKHLHQEKVNRIRTEHRINVHGCDVPDPVCTFEELQSEYHLNPCILQNLK
DAGLNAPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFSLPLLAHLQQPANLGFRALIIS
PTRELASQTYRELLRLSEGVGFRVHIIDKASLAAKKYGPQSNKKYDILVSTPNRLIYLLK
QDPPAVDLSSVEWLVVDESDKLFEGGKTGFREQLATVFLACSGAKVRRAFFSATCTSEVE
QWCRLNLDNLVSVNIGHRNTAVETVEQELLFVGTENGKLVAVRDIIKKGFLPPMLVFVQS
IERARELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIWVLICTALLARGIDFKGV
NLVLNYDFPTSSVEYIHRIGRTGRAGHRGKAITLFTENDKPLLRSIANVIKQAGCPVPDY
MIGFKKIHSKVKRRLEKKPPRRTTICTTPRFLMKKKGKEQKTGQKRAASGTQKGEAEAPQ
QQRALKKRKGGAGPLTEATQKMVSGVKAKKKKGTRKRDGRTVVQTDH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggacacatttgagttgtttcgtaaactcggagctggagcgaaatttgatttgaagaga
tttggtcaagacgccgctcggtttaaggtgtccagatctcagggagaggaaaacacttct
gatcgtctttctgtgatcgactactttggtgcaggatcagctaatggagcccagagtgat
gaagaagggagcggagataacgaaaaagggggcagaaggaagcgcaaagaggaggtgaaa
gatgtaaagctgaagaagaaacgggctaaaagaaatcagggagaactggaagctggtggc
agacagccgaacaaagaaagctccgtcacgtggacgtcctcgctggaggaaaaccaaagt
gatgggaaagagaagtcctcgttgaggaggctgaaacacctacatcaggaaaaggtgaat
cgtattcgcaccgaacaccgtatcaacgtgcacggctgcgacgtccctgaccccgtgtgt
acgtttgaggagctgcaatcggagtatcatctcaacccgtgtattctccagaacctcaaa
gatgcgggactgaacgctccaacgccgatccagatgcaggcgatacctctcatgatgcat
ggtcgggagctcttggcgtgcgctccgacgggatcaggaaaaacgctggcgttctcactc
cctctactagcgcaccttcagcagcctgcaaatctgggcttcagagccctgatcatctcc
ccgaccagagaactggccagccagacctacagagaactgctccgcttgtcagagggagtt
ggcttcagggttcacatcattgataaagcttccctcgctgccaagaaatatggaccccag
tcaaacaagaaatacgatattcttgtcagcactccaaacagactcatctaccttctgaag
caggatcctcccgctgtcgacctcagcagcgtggagtggctggtggtggacgagtccgat
aagctgtttgagggcggtaagacgggcttcagagagcagctggccacggtttttctcgcc
tgctccggagcaaaggtgcgcagagctttcttcagcgccacgtgcacgtcggaggtggaa
cagtggtgccgactcaacctggacaacctggtttctgtcaacattggccacaggaacacg
gcggtggagacggtggaacaagagctgctttttgtcggaacggagaacgggaagctcgtt
gccgtgagggacatcattaaaaaaggtttcctgcctcccatgctggtgtttgttcagtct
atagaacgagctcgggagctcttccatgagctggtttacgaaggcatcaacgttgacgtg
atccacgccgagcgtacgcagcagcagagggacaacgtggtgaacagcttccgctccggt
aagatttgggtgttgatctgcacggctctgctcgccagaggaatcgacttcaaaggagtg
aacctcgtgctgaattacgactttcccaccagctctgtggagtacattcaccgaatcggt
cgcactggcagagcgggacatcggggcaaggccatcaccttgttcacagagaacgacaag
ccgctgcttcgcagcatagctaatgtcataaaacaagctggctgtccagtaccggactac
atgataggcttcaagaaaatacacagcaaagtaaagcgaaggcttgagaagaaacctccc
aggagaaccaccatttgcacgactcctcgctttctgatgaagaaaaagggcaaagagcag
aaaaccggacaaaagcgagcagcgagtgggacgcagaaaggagaggctgaagctccacag
cagcagagagcgcttaagaagaggaaaggaggagcaggaccactcacagaagcaacgcag
aagatggtgtcaggagttaaagctaaaaagaaaaaggggacacgaaagagggacggaaga
acagtggtacaaacagaccactaa
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