Nothobranchius furzeri (turquoise killifish): 107387041
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Entry
107387041 CDS
T05163
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107387041 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107387041 (rnf43)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107387041 (rnf43)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107387041 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Zn_ribbon_IFT122_C
zf_RING_Vps8_fungal
zf_RING_Vps8
ECSCR
Motif
Other DBs
NCBI-GeneID:
107387041
NCBI-ProteinID:
XP_015817278
UniProt:
A0A1A8B6L2
LinkDB
All DBs
Position
sgr11:37146163..37246244
Genome browser
AA seq
811 aa
AA seq
DB search
MTAPPRRLAGLWPWLVMAALQVVLGQQGPESERSALRAGIKVTLVHYESTGEPIILEGDF
VGGSAGKAEGKLMQYHPLSLCNTSEDERQDSAFITIVKLEHRVARCLPLIDKARMALEKG
AQAVIFDISDDANAASEFLETESLPHPVVLVKGDSAEKLMGLVNKNEEANVVIEIKIETR
PSYDMTILLTIILVILTIVLIFALRYKCKSNRTWDSVHQQTMRAINRLETRTYRSQSCSQ
RHRGAWGSASSSNSSPVCAICLEEFQEGQNLRIISCAHEFHRECVDPWLLQHRTCPLCMR
NIMGTERQAQRTRPQQSSEQSQRFLHPQPYSTPHSHLFPQHAIPFSMRPHYPRGPSGPYP
NLGHYSGSAPMDSQTLHFLSSRQLGAGCGYHLPVEVPGRPHRIGGNCRTSNHHYFSRRSC
NNYRSSCPAQRNTSGSRPQHNVSVTPPGHGTVARSRQDEGSCSGGSYHTERSGYLADGPA
SDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFGYYGAGPGRSPRRNS
LEAGAQVRPRSLDSVVNKEGCLEEQPQTVFSHIHYHRHRHHHYEEGEHSQGLTRGSDEEQ
GACAAAAGPSAPILDKDSSMCPPKHSPCHCSKPDPTDRPSPGTECQDRDPTGPPVLMSSI
PLQLQPRCCHQGHGHPPAPLGRVGGCLIDGPSVRFHQSLDMQDDHSIHIHYGQGSGFCCS
SELHPALLPVPLILDSAGMEEWPCCAGAHVVWQKQVQQAHSEPQLMGPGTSMDRPPCRSH
HHGFAADRTTDICLYCQSLQNNQGSEEESGV
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccctccgcggcgtctggccgggctctggccgtggctggtcatggcggccctg
caggtggtgctgggccagcagggcccggagtccgagcggtcggcgctccgagcgggcatc
aaggtgacgctggtccattacgagtcgactggggagccaatcattttggagggggatttc
gtaggaggaagtgccggcaaagcggaggggaagctgatgcagtatcaccctttgtctctg
tgcaacacgagcgaggatgaacgacaggacagtgccttcatcaccatcgtcaaactggag
cacagggtggctcgctgcctgccgctcatcgacaaggctcgcatggcgctggagaaagga
gctcaggctgtgatctttgatatcagtgacgacgccaatgctgcttctgagtttctggag
acagagtccctcccccatccagttgttctggtgaagggggacagcgcagagaaactgatg
ggtttggtcaacaaaaacgaggaggccaatgtggttattgagatcaagatcgagacgcgg
cccagttatgacatgactatcctgctcaccatcatcctggttattctcaccatcgtcctg
atctttgctttacgctacaagtgcaagtccaacagaacctgggactctgttcaccagcaa
accatgcgggccatcaatcgactggagaccagaacgtatcgctcccagagctgctcgcaa
cgccatcgcggggcctggggctcagccagcagctccaattccagccctgtctgtgccatc
tgcctggaggaatttcaggaagggcagaatctgaggattatttcctgcgctcatgagttc
catcgagagtgtgtggatccctggttgctgcagcatcgcacctgtcccctctgcatgcgc
aacatcatgggaacggagcgtcaagctcagaggacaagaccccagcagagttcagagcaa
agccagaggttcctgcacccccagccttacagcacccctcacagccacctgtttccccag
cacgccatccccttctctatgaggccccactatcccagaggaccttctgggccttacccc
aatctgggccactacagtggctctgctcccatggacagtcaaacactacacttcctcagc
agtaggcagttgggtgcagggtgtgggtaccaccttcctgtggaggttccagggaggccc
caccggattggagggaactgcaggacttctaaccatcactacttctctcgtcggtcctgc
aataactaccgctcttcttgtcccgcacagagaaacacatctggctccagaccgcagcac
aatgtctcagtcacaccaccgggccatggaacggtggcccgcagtcggcaggacgagggg
agctgttctggtggcagctaccacacagaacgcagtgggtacttggccgatggcccagca
agtgactccagctctggtccctgtcacggctcttccagtgactcagttctcaattgtact
gatgtgtccctgcagggagtttatggcagctggtccactttccgtagctctctgagcagt
gactatgatccgtttgggtattacggggcaggtcctgggcgtagccctcgcaggaacagc
ctggaggctggggcccaggtccggcccaggtctctggattctgtggtaaacaaagaaggc
tgccttgaagagcagccacagactgtgttcagccacatccactaccatcgccacagacac
caccactacgaggagggggagcacagccaaggcctgaccagaggatctgatgaggagcaa
ggggcttgtgctgctgcagctggtccctctgctcccatcctggacaaagactcttctatg
tgccccccaaagcacagcccttgtcactgttccaagccagaccccactgaccggcccagt
cctgggacagagtgtcaggacagagaccccacaggacctcctgtccttatgtcctccatt
cccttacagctccagccccgttgctgccaccaaggacacggacaccctcctgctcctctg
ggacgagtgggaggctgtctgattgacggcccctctgttcgcttccaccagagcctggac
atgcaggacgatcatagcatccatatccactacggtcagggttcgggattctgctgctct
tcggagctgcacccggccctgctccccgtgcccctcattctggactcggcagggatggag
gagtggccttgctgtgccggagcccatgttgtgtggcagaaacaggtgcagcaggcccac
tcagagcctcagctcatgggtcctgggacttctatggacagacctccctgcaggtctcat
caccacgggttcgctgcggaccgcaccacagacatctgtttatactgccagtcattacag
aacaatcagggatcagaagaagagtctggggtgtga
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