Nothobranchius furzeri (turquoise killifish): 107387116
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Entry
107387116 CDS
T05163
Name
(RefSeq) remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107387116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107387116
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
107387116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
107387116
NCBI-ProteinID:
XP_015817374
UniProt:
A0A1A7Z7X0
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Position
sgr11:43412183..43442525
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AA seq
1511 aa
AA seq
DB search
MAASAAIASSSPGLCPNYAVICSFLERYGALLDLPELTFPQLERYLQDTSSVPKLLADLH
VKLLRKIGKSVSADRWEKHLVKICQEVNAAWAWELEQKGYKELPVEGKTAILKHLCECQF
DENIKFKTAVNDEDPDKMRLQPIGRDKDGQMYWFQLDQDDNVRVYVEEQDDLDGSSWKCI
VRTRNDLAEVVALLKTQIDPALLKRDEELKNKTDQEDKEKGDIKKEDASDEDGKDTDKTV
CSEKHEETQKDELKSEVSEEKSSLNGIVEGKPQAELEAENVVTKAESIKEEPMELASVKP
NPTEPIPLCETSSAPTKEEAKKKSSEEIHHSMKNEHQAKIPLKKRGMKFSEDFDKNGTIA
AQNPAITNLKEARVAESAFEPPPKIPRVNDQVNGEIPPSSEKEQTSKSRENVVPAAGEDG
SRVKTSETCSTETLKEAKSQQSNAKRLDDEQELKNGVEKSSSHEKLEHRITESGSSGKTD
SDRLDLNQGAKSKEADSESTSTKMSNGNKSESSASKEEPESTKTDAETSVDSKASVSVIK
TSITDKSEETKSLKEVVAKDDQSESPKPEEQRDKTRKESLSKAGKKEAENPDRVTKVSCE
DHTMRDVTPANDSTSRPTVEPTLGEDNLTKPQEGHKTDTNVDERKTPDIVCEGKNKPPSP
VEKTCKETEEKSQELKKEEEKKSDSKEPRADGVKDTEKLPNDKEKEDSSSEGVSKSKKET
KKSQKQKQTSVDEDGSELQKSSKEPEVESSKTEKQTSEGFASDEQSKNKSKEVENGGEAP
ATEDACQRSKRPAHRRRAELQREERHGGDSESDTNTRMCLRRSPRISKPTQKAVEIQDKK
TEKPPTASPPQKDEEEEEENEEETQLKAVQKKPKEKRVNQESHPKVKGRKRRRTRWSNTR
ARRKKKNSDDESENSDEESSEEEESEEEEDDSDEDYKVERNRKRRNRNRERRSSDSSTSS
SDDLPPNDDPCKHCGLPNHPELILLCDSCDNGYHTACLRPPLMIIPDGEWFCPPCQHKQL
CDKLEEQLQNLDAALKKKERAERRKERLIYVGISLENIIEPSVEVEEEKPDIIIKEKKEA
KRSKSWGRRSTRAKKTISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKDMANITGHRGKD
ISTILQAEEGKENGRPPRPNASQRKKKRRRLNDLDSDSTVDDEESEEEFCLSESSEEEFV
ASDNDSEPETDQDSKDSEFGSNRSGRHHSSSRSRRPQKRRQSSRKRRRPKWFSDDEEETD
DEVEEDEIVTEGSSDFSDSDLDMSRRRSRRSHKKEVNYCETSESEGSQAETNRAKMKPRR
RRDSSDSDASFSKDSEEDLRGKREKRRADSSEEDFRQRRRRLALKRRRASEDDDSDDSSD
ESSEEDRPVRKRVNRIDSDDDDDEQDEEKPKKLVEEDSKGTNQWDSGTAELQSTNGQNAA
KSHEGFANRPAPAAPGLVSHLEPPKSIGSTPAAATAPNGLVGQEIAAQDDEEDDLLGVTD
LVDYVCNNEQL
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcggcggcaatagcgagttcttcccccggtttgtgtccaaattacgccgtg
atttgctctttcctggagcggtacggagccttgctggacttaccggagcttacatttccc
cagctggagagatacctgcaggacacatcctcagtcccaaagctgctggctgaccttcat
gtcaagctgctgaggaagattggcaagtccgtgtctgcagaccgatgggagaagcaccta
gtcaagatttgtcaggaggtcaacgcggcctgggcgtgggaactcgagcagaaaggatac
aaggagctgccggtggagggcaagacagccattctgaaacatctgtgcgagtgtcagttt
gacgaaaacataaagtttaaaaccgccgtcaacgatgaagaccccgataagatgcgcctg
cagccgatcggtcgggacaaagacggacagatgtactggttccagctggaccaggatgat
aacgtccgcgtctacgtggaggagcaggacgacttggacgggtcatcgtggaaatgcatc
gtcagaactagaaatgatttggccgaggtcgtcgccctgctgaagacacaaattgacccg
gcgctgctgaagagagacgaggagctgaaaaacaaaactgaccaggaggacaaagaaaag
ggtgacattaaaaaagaggatgcatcagatgaagacggcaaagacacagacaagactgtt
tgttctgaaaaacacgaagagacacagaaagatgaactgaagtctgaagtttcagaggag
aaatcatcgctgaacggcatcgttgaaggcaagccgcaggcagaactggaggcagaaaat
gtcgtcaccaaagctgagagcatcaaagaagagccgatggagctggccagcgttaaacca
aaccccaccgagccgattccgctttgtgagacgtcttctgcaccaacgaaagaagaggct
aagaagaaaagctcagaggagatccatcattccatgaaaaatgagcatcaggcaaaaatc
cccttgaaaaaacgagggatgaagtttagtgaggactttgacaaaaacgggaccatagca
gcacaaaatcctgcaatcactaacctgaaggaggctcgcgtagccgaatcagcgtttgag
ccaccaccgaaaattccgagagtcaacgatcaagttaacggcgaaatcccgccctcgtct
gagaaagagcagacgagtaaatccagagaaaacgtcgttccagctgcaggagaggatgga
tcacgagtcaaaacgagtgaaacgtgtagcacagaaactctaaaggaagccaagtcacag
caaagcaacgctaaacgattagacgatgagcaagagctgaaaaatggagtagagaaatca
tccagtcatgaaaaactagaacatagaattacagaatccgggtcgtcgggtaagacagac
tcagaccgtttagatttaaatcaaggagctaaatctaaagaagctgattcagaatcaacg
tcgacaaaaatgtccaacggtaacaaatcagagtcttcggcatcaaaggaggaaccagaa
tccaccaaaaccgatgcagagacatctgttgactctaaagccagcgtatcagtcatcaaa
acatcaatcactgacaaatcagaagaaacaaagagccttaaggaggttgttgctaaagac
gaccaatccgaatcacctaaacctgaagagcagagagacaaaaccaggaaggagagtttg
agtaaagcaggtaagaaggaggcagaaaatcctgacagagtgacgaaagtcagctgtgag
gatcacacgatgcgggatgttaccccggcgaacgactccacgtccaggccgactgtggag
ccgaccctgggagaagacaatctcacaaaaccacaagagggtcataaaaccgatacgaat
gttgatgaacgcaagacgccggacatcgtttgtgaagggaagaataaaccgcctagtccc
gtagagaagacctgtaaagaaactgaggagaaatctcaggaactcaagaaagaggaggag
aaaaaatccgactcgaaggaacccagagcagacggcgtgaaggatactgaaaaacttcca
aacgacaaggaaaaggaagattcttcatctgaaggggtgtcaaaaagtaaaaaagagact
aaaaagtcccaaaaacaaaagcaaacatcagtggacgaagacggatctgaactccagaaa
tcaagcaaagaacctgaagtagaatcctcgaaaaccgagaaacaaacgagcgaaggattc
gcctcagacgagcagagcaaaaacaaaagtaaagaggtggagaacggcggtgaggctcca
gcaacagaggacgcttgccagagaagcaaacgtccagcacatcgacgaagagccgagctt
cagagagaggaacgccacggaggagactctgagtcggacacaaacaccaggatgtgtctc
cggagatcgccaaggatttccaaaccgacgcaaaaggccgtggaaatccaagacaagaag
acggagaagcctccgactgcttcgccaccacagaaagatgaggaggaagaggaggaaaat
gaagaagaaactcaattgaaggctgttcaaaagaaacccaaagagaaaagagtgaatcag
gagagccatcccaaagtcaaggggagaaagaggagaagaactcgctggtccaacacgcgg
gcgcgccggaaaaagaaaaattcagatgatgagagcgagaacagtgatgaggagtccagc
gaagaggaggagagcgaggaggaggaggacgacagcgacgaggactacaaggtggagcga
aacaggaagaggagaaaccggaacagagagagacgaagctcggactcttccacgtcctcc
tccgacgacctacctcctaatgacgacccctgcaaacactgtggtcttccgaatcatcct
gagctgatcttgctctgcgactcgtgtgacaacggctaccacacagcctgtctcagacct
cctctcatgatcatccccgatggagagtggttctgtccaccctgtcagcacaagcagctc
tgtgacaaactggaggagcagctccaaaacctcgacgccgccttgaaaaagaaggaacgg
gctgagaggaggaaagaacgtctaatttatgtaggcatcagcctggagaacatcatcgag
ccttctgtggaggtggaggaagagaagcctgacatcatcattaaagagaagaaagaagca
aagaggagtaagagctggggtcgaaggtcaacgagggcaaagaaaaccatcagctacaga
tttgatgaatttgacgaggccatcgaggaggccatagaggaagacatcaaagaagcagaa
ggtggaggagctggtcggggtaaagacatggccaacatcacgggtcacagaggaaaagac
atttccaccatcctccaggcagaggagggtaaagagaacggccgaccgccgcgacccaat
gccagtcagcgcaagaagaaacgccggcggctcaacgacctggacagcgacagcacggtg
gacgatgaggagagcgaggaggagttttgcctcagtgagagctccgaggaagagttcgtc
gcgtcggataacgactcggaaccggaaacagaccaggactcgaaggacagcgagtttggc
agcaacagaagtggcagacaccactcttcctcgcggagcagaagaccacagaaacgaaga
caaagctctagaaagaggcggagaccaaaatggttctctgacgatgaagaggagacggat
gatgaagtggaggaagatgagatcgtgactgaaggctccagtgatttcagcgacagcgat
ctggatatgagtcgacggaggtctcggcggagccacaagaaagaggtgaactactgtgag
acgtctgagtctgaaggatctcaggcagaaactaaccgggccaagatgaaacccaggcgg
cgccgggacagctccgacagcgacgcaagtttctctaaagactctgaagaggatttgaga
ggtaagagggagaaaagaagagctgactcctcagaggaagatttccggcagcggcgcagg
cgtctagcactaaaacgcaggcgagcgtccgaagacgatgactcggacgacagctcagac
gaatcttcggaggaggaccggcccgtccgtaaacgagtgaaccgcattgactcagacgac
gacgacgatgagcaggatgaagagaaaccgaagaaattggtggaggaggattcaaaggga
acaaaccagtgggacagcggtacggctgagctgcaatccaccaatggacagaacgcggcg
aagagccacgagggctttgccaatcgccccgcccccgctgcgccgggcctcgtctcacat
ctagagccgcccaaaagcatcggttccacaccagctgctgccacggcgcccaacggtctg
gtcggccaggaaatcgctgcgcaggacgacgaggaagacgacctgttgggagtcacagac
ctcgtggactacgtctgcaataacgaacaattgtaa
DBGET
integrated database retrieval system
