Nothobranchius furzeri (turquoise killifish): 107387245
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Entry
107387245 CDS
T05163
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107387245 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfu02000
]
107387245 (abca5)
Transporters [BR:
nfu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
107387245 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Bac_rhamnosid_N
Motif
Other DBs
NCBI-GeneID:
107387245
NCBI-ProteinID:
XP_015817587
UniProt:
A0A1A8AQN5
LinkDB
All DBs
Position
sgr12:11029814..11068055
Genome browser
AA seq
1683 aa
AA seq
DB search
MHFIPEASLSETTSRPYIIRMRNAGSMQPVFRTDADVWSQTKSLLHKNLLIKWRTKQQSL
QELILPLLLLSLLILISTLNPHIYYGDISTVELNSNFQKIFKDFSGLGYTPITNITSHIM
EDVAREINMQDRLEFFASEEDLENASLYDPSSYIGVVFLNSAATSYKLRFPYNKLPLSRD
YTESVASCYSSLEKCRAANYWLSGFSHLQSLIDAAIIQMQTKRSVWKELSLNVFMMGQPS
FVEVHEFPHALISIYLVLAFTPFVTFLIVNVVAEKEHRLKDTMTMMGLYNTAFWLSWGLL
YAALVTAMSILMALIATVTSLFPNSDFFIIFFLNFLYGISSIFFSFMLTPLFKKPKFAST
VGSMLTVVFGCMSLFVVLMKDFPQPLVWLLCLLSPSAFSIGIAQVVYLEAQGYGAVFSTL
TSGPYPLYVPLFMLAVDCVLYLLLAVYLDQVIPGDFGMRRSLLYFLKPSYWSKDRKRYVE
VSSVYDAEANGAPAGEECIEPVSPEFRGKEAIRINNIRKVYKDKDNMVEALRGLTFDIYE
GQITALLGHSGAGKSTLMNTLCGICPPTNGSATIYGSPVAEVAEGSEMKQLVGICPQFNI
IFDVLTVEEHLKIFAAIKGIPPADVKTEVTKVLKDLDLEKIMTAQAKNLSASQKRKLSVG
IAILGNPKILLLDEPTAGMDPCSRHQVWSLLKKLRAGRVIVLSTHYMDEADILADRKAVI
SQGQLKCVGSSLYLKIKCGVGYHLRMSVSEGCNAESVVSLVNRHVPKAKLSRQHEAELTF
TLPFESMDTFPGLFSELDSQPKLGIINYGVSMTTLEDVFLRLEAENEVDQADYSVFNQEQ
AEDEYDNAAVDDTDQRLLSFSDNKSAVSGHALWWQQFSAVAWLHMLNMRREWKAFIYTLV
LFLLFVGTILVISLVTGNIQIHSPERQFSPIYLLKKNQAPHRYATSLLVQNSSDSDISDF
IGNLESQDIKVELMRGSSFMEVAPHSAAINVTGSSKGFKYSIAFNSTTVHALPMAVNILS
NAILRGLNGSGQIRTWTKPFENQISDKVSYALVCIEAIMLGMLAAGMPAYFAMDHTRDRE
IKCRSMLQISGLLPSAYWCGQAAVDIPFYYLILSLMNIILFSFHSGNLLVSGNLTSLVLC
TVGFGPAVILLTYVVSFGFTRVQSNRDFFSFVSMMVCVVSAFLVQLFEFETPEITGILQN
VLCLLNPLYPLMGCLNCITKATFLPTLYVENSLWKSQLISAVAPYLQCILLLFILRWLEI
LYGGRAMKDDQLCRISSKSKPKLDWAPDEGMNEDEDVQIEKARVKEALTCQSCEEKPVVV
VHNLRKQYRGRKEGFSFGKKTKVATKNVSFCVRKGEVLGLLGPNGSGKSTIMHMLAGVTN
PTAGQILMGDYSTEFHPVDNPLEHVGYCPQLNPLWPRITLQEHLEIYAAIKGLKGQDVPG
IIKRVSNALEVKDHLHKPAKSLSAGLKRKLCFALSMIGNPQIVLLDEPSSGMDPKSKQRM
WRAIRAAFRNCQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKGKFGQGYSLE
VKLREEHMGLPQVALLHDEILRIFPHAARQESFTTLMVYKIPMEDVKFLAQAFSQLENAK
KTFDFEEYNFSQSTLEQVFLEFAKEQEIDDDEVGSISTTFQWQRLHQDGAVPTHHADSIV
HQL
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcatacctgaggccagccttagtgagacgacctcccgtccctacatcatccgg
atgaggaatgctggcagcatgcagcctgtgtttagaactgatgctgatgtctggtcccaa
acaaaaagcctcctgcacaagaatctgctcatcaaatggaggaccaagcagcagagcctc
caggaactgatcctccctctgctgctcctgagtctccttattctcatcagcacactgaac
ccacatatttattatggagacatcagcacagtagagctgaacagcaacttccagaagatc
ttcaaggacttcagtggtctgggctacacaccaatcacaaacatcaccagtcacatcatg
gaagatgtggcccgggagataaatatgcaggatcgtctggagttttttgccagtgaggag
gacttggagaacgccagcttgtacgacccgtctagctacatcggtgttgtgttcttgaac
agcgccgccacatcgtacaagctgcgctttccatacaataaactgcccctttcaagggat
tacaccgagtctgttgccagctgttacagcagcttggagaaatgccgagcagctaattac
tggctctctggtttctctcatcttcagtcgctgatcgatgcagccatcattcagatgcag
acaaagcgctctgtgtggaaagagctgagtctgaacgtgtttatgatgggccagccaagc
tttgtagaggtgcacgagttcccccatgccctcatctccatctacttagtgctggctttc
acccccttcgtcacctttctcatcgtcaacgtggtggctgagaaggagcatcgccttaaa
gacaccatgactatgatggggctttataacacggccttctggttatcatggggcctgttg
tacgccgccctggtgaccgccatgtccatcctgatggcccttatcgccacagtcacctca
ctgttccccaacagcgacttcttcatcatctttttcctcaacttcctctatggaatatca
tctatctttttctccttcatgttgacgccattatttaagaagccgaagtttgcgagcacg
gtgggctccatgctgacggtggtgttcggctgcatgtcgctcttcgttgtgctgatgaaa
gacttcccacagccgctggtttggctcctctgcttgctctctcccagcgccttctcaatc
gggattgcacaggtggtttacctggaggctcagggatacggggccgtgttttccacccta
accagcggtccttatcccctctacgtcccccttttcatgctggctgtggactgtgttctc
taccttcttttggctgtttacctggaccaggtgattcctggtgactttggaatgaggaga
tccctgttgtacttcctgaagccgtcctattggtccaaagacaggaagcgctacgttgaa
gtcagctcggtttatgacgctgaagctaacggcgcccctgctggggaagagtgtattgag
cccgtttcccctgaattcagaggaaaagaagccatccgcatcaacaacatccgaaaagtc
tacaaagacaaggacaacatggtggaggctttgagaggcttgacgtttgacatctacgag
ggccagatcacagccctgctgggacacagcggagctggaaagtccactctaatgaacacc
ctctgcggcatctgcccgcccacaaacggctcggccaccatatacgggtctcctgttgca
gaggtcgccgaggggtcggagatgaagcagctggtgggaatctgccctcagttcaacata
atctttgatgtgctcactgtggaggagcatctgaagatttttgctgccataaaaggaatt
ccacctgcagatgttaaaactgaggtgaccaaagtgctgaaggatctggacctggagaag
attatgacggctcaggctaagaatctaagtgcaagccagaagagaaaactctccgtgggc
atcgccatcctcggaaatccaaagattcttcttctggatgaacctacagcaggaatggac
ccctgctccagacaccaggtctggtctctgctgaagaagctccgagccggcagagttata
gttctcagcacgcattacatggacgaggcggacatcctcgctgatcgtaaagccgtgatc
tctcaagggcagctgaaatgcgtcggctcctccctttatctcaagatcaagtgtggggtt
ggttatcatctcagaatgtcagtcagtgagggatgtaatgcagaaagtgttgtatcgctg
gtcaaccgtcatgttcccaaagcaaagttgtcccgacagcatgaggcagagctgacgttc
acgctgccttttgaaagcatggacacatttccaggattgttttcggagctggactcgcaa
ccaaagttggggataattaattatggggtttccatgacgaccctggaagatgttttcctt
cgtttggaggcagaaaatgaagtggatcaagctgactacagcgtgtttaaccaagagcag
gctgaggatgagtacgataacgccgctgtggatgatacggaccagcggctgctctcgttc
tctgacaataagtcggctgtgtcgggtcacgctctgtggtggcagcagttcagcgccgtg
gcgtggctgcacatgctcaacatgcgtagggagtggaaggctttcatctacactctggtt
ctgttcctgctgtttgttggtaccatcctcgtgatttcgctggtgacaggaaacatccag
attcactcaccagaacggcagttttcacccatttaccttctcaaaaaaaatcaggcacct
cacagatatgccaccagcctgctggttcagaactcatcagattcagacatttctgacttc
atcggtaacctcgaatcgcaggacatcaaagtggagttgatgagaggcagcagcttcatg
gaagtagctcctcacagtgctgccatcaatgttacaggatccagcaagggttttaaatac
agcatcgcctttaacagcaccactgttcacgctttacccatggctgtaaacattctgagc
aacgccatcctcagaggtctgaacggatccgggcagatccgaacctggacaaaaccattt
gagaatcaaatctccgataaagtgtcgtatgctttggtctgcattgaggccatcatgctg
ggaatgttggcagctggaatgcctgcctatttcgccatggaccacactcgagatcgagag
ataaagtgccgttcaatgctgcaaatctccggtctgttgccatcagcctactggtgcggt
caggcagcggtggacatccccttctactacctcatcctttccttgatgaacatcatcctc
ttctccttccactctggaaacctgctggtttctggcaacctcacctctctggttctctgc
actgttggctttggtccagccgtgatcctcctcacgtacgtggtttcatttggattcaca
cgggtccagagcaacagggacttcttttcttttgtctccatgatggtgtgtgtggtttct
gccttcctggtccagttgtttgagtttgaaacccctgaaataacaggaattctgcagaat
gtcctgtgtctcctgaaccctctgtatcctctcatgggctgcctgaactgcattaccaag
gcaacattcctgccaactctgtatgtggagaactccctgtggaaaagtcagctcatttca
gctgtagctccctatctccagtgcatcctgctattgttcattctccggtggctagagatc
ctttatggagggagggcgatgaaagatgaccagctttgcaggatctcgtccaagtcaaaa
cccaagctggattgggccccagatgaagggatgaacgaggatgaggatgttcagatagag
aaggccagagtgaaagaggcactcacctgccagtcctgtgaagagaaacctgtcgtggtt
gtgcataacctgaggaagcagtacagaggcagaaaagaaggcttctcttttggcaagaag
accaaagtggccacaaagaacgtctctttctgtgttcgaaaaggtgaagtcctcggactg
ttgggtccaaatgggtcaggaaagagcaccatcatgcacatgctggcaggtgtcaccaac
cccacggcgggccagattctgatgggagactacagtaccgagtttcatccagtggacaac
cctctggagcacgtgggctattgtcctcagctgaaccctctgtggcccagaatcactctg
caggaacatctggagatctacgccgccatcaaaggtctgaaaggacaggatgtccccggc
atcataaagcgagtgtccaatgctctggaggtgaaggatcatttgcacaaaccggccaag
agcctttcagcaggactcaaacggaagctgtgctttgctttgagtatgatcgggaatcct
cagatcgtcctgctggatgaaccgtcgtcgggaatggatcccaaatctaagcagcgcatg
tggagggccattcgcgctgcgttcaggaactgccagcgtggcgccatcctcaccactcac
tacatggaggaggccgaggctgtgtgcgaccgtgtcgccattatggtttcaggccagctg
agatgcattggctccatccaacacttgaaagggaaatttggtcagggctacagcctggag
gtgaagctcagagaggagcacatggggctcccgcaggtggcgctgctgcacgacgagatc
ctccgaatttttccacatgctgcacgccaggagagcttcaccacactgatggtttataag
atccccatggaggacgtgaagtttctggctcaggcgttctcccagttagagaacgccaaa
aagacttttgactttgaggagtacaacttctctcagtcaactttagagcaggtgttcctg
gagtttgccaaggagcaggagatcgacgatgatgaggtgggatccatcagtacgaccttt
cagtggcagaggctgcatcaggacggcgctgtgcccactcaccatgctgacagcatcgtt
caccagctttga
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integrated database retrieval system
