Nothobranchius furzeri (turquoise killifish): 107387385
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Entry
107387385 CDS
T05163
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107387385
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107387385
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
107387385
NCBI-ProteinID:
XP_015817819
UniProt:
A0A1A8U002
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Position
sgr01:94164302..94204171
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AA seq
1779 aa
AA seq
DB search
MLPILFTLTALALWCPVRMQEPEFADGCTEGSCYPATGDLLIGRAHKLTASSTCGLHQPA
PFCIVGHLEEDTKCFVCDSSEMYDEDVNPTSHTIENVVTTFAPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPSAMMIERSMDYGKTWQVYRYFAYDCESVFPGISTGPM
VRVDDIICDSRYSDIEPSTEGEVIFRVLDPAFEIEDPYSLRIQNMLKITNLRVQFIKLHT
LGDNLLDSRDEVTEKYYYAIYDMVVRGNCFCYGHASECAPIAGQPTGEDGMVHGRCVCNH
NTEGLNCERCQDFYHDLPWRPAEGRNTHACKKCECNRHSTSCHFDRAVYTSTGEVSGGVC
DDCQHNTMGRQCEQCVPFFYQHPSRDLRDPNICEPCSCDPEGSLQGGLCDSHTDVAAGLI
SGQCRCRVNVEGERCDHCRQGHYGLGQSPDGCLPCTCNPLGTVPGGNPCEPEAGRCFCKR
LVSGHNCDRCRPEHWGLSNDMDGCRPCDCDQGGAVDNNCDPHSGQCMCREHMFGRRCDQI
EPGFYFIALDHYTYEAEEASHGSGVKLEQRPYPQNRNPTWTGMGFANVPEGTFLEFHVNN
IPESMDYDILIRYEPQLPQQWEEVDVRVERPVFHPPNHSAHCRDALQAADEQSLSLPPGS
RHVLLVTPVCFEKGLNYTIRLSFPFYSSVSSVQSPYTLIDSLVLMPRVRELDMFGGTDGE
EAWETFQRYRCLESSRSVVKSPMTDICHHYIFSVSALLHKGAMACQCDPQGSLSAICESN
GGQCQCRPNVVGRNCDHCAPATFLFSPAGCRSCGCDSLGSVSPFCHEATGQCECVPGATG
RQCSHCLPGFWGFPHCRPCSCNGHSESCHPQTGECQGCRDFTTGHHCERCMNGYHGDPQL
GSGGHCRPCMCPEGPRSARQFAESCYLLTNQLVCVCSPGYKGDRCDECAPGYHGNPLIPG
GQCMPCQCNNNIDMHDPGSCNARTGACLKCLHHTQGRSCQNCQQGYYGNAATQSCRKCAC
YSAGTAPRACSSPDDCECEQRSGQCPCQPNVVGQNCDRCAPDTWNIASGTGCQPCDCHPV
HSYGSSCDEVTGQCVCKPGFGGQTCRECRELFWGDPEVKCQACDCDPRGISSEQCHRATG
DCTCMEGVSGPRCDKCARDHWGDFPSCEPCHQCFGVWDTVVSELTNQTRRLESQVTQLLT
SGVTAPYKELVSSLEKNAKAVRELVENKTAAVKLEKVQDLTHQITGLMAFLSGKLNTTEE
DLDLVFHDKNITDKDLDDLTDEATMLEKKVEELRQQVYNAKNANIHGAMNTISAAYMESQ
NAELRSNASSSDPGNTIEQSAAVRKATEDKLSSSQREFDRKHQRNEQKLEKLSNELKILD
MSPLSEKMCGGAAGAEGEGCAPCGGLGCVGENGAPHCGGEGCSGLITKSKNVLKVSQNLD
QEIQEAVQEVDKLSRMVWDANMRANEAKVKAMEVLIKSNRSRERVEESNDQLRNLIQEIR
ELLSNDKADKSVIEAVANDVLALEMPTSAKKLQELTNEIREKVSTLTSVETILSRSAEDV
QAAESLLRQAKAASEEASNLKEKSDAVNAALNETEHAQNTTLHAILLAQKNIAGTLQLLN
SAETETEKSELKLSNTTGRLVQLEREVGLLRQNILEMNQKVETTERITEQARQNAEEAQR
EFDDKVKDQFEVMEEQMVDKGESVLQARRRADELQQEARELLEQSSEKLQRLGELENSYE
ANQHILEIKAAELDELEQTARRILDEMSQKVTQYISCQN
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccatacttttcaccttgacagctttggccctgtggtgtcccgtcaggatgcag
gaaccagagtttgcagatgggtgcacagagggcagctgttaccccgccacaggtgacctt
ttgatcggccgggcgcacaaactcactgcctcctccacctgtggccttcaccagccagca
cccttctgcatcgttggacacctggaggaggacaccaagtgtttcgtgtgcgactccagc
gagatgtacgacgaggacgtcaaccccaccagccacaccatcgagaacgtggtcaccacc
ttcgcccccaaccgcctgaagacctggtggcagtcggagaacggcgtggagaacgtgacc
atccagctggacctggaggccgagtttcatttcacacacctcatcatgaccttcaagacg
tttcgtccatctgccatgatgatcgagcgttccatggattacgggaaaacctggcaggtt
taccgttactttgcctacgactgtgagtctgtcttccccggcatttccaccggacccatg
gtgagagtagacgacatcatctgtgactcccgctactcagacatcgaaccatccacagaa
ggagaggtaatatttagagtgttggaccctgcctttgaaatcgaggacccctacagtttg
aggatccaaaacatgttgaagattacaaacctcagagtgcagttcatcaagctccacacg
ttgggcgacaacctgctggactcccgcgatgaggtgacagagaagtactattacgccatc
tacgacatggtcgttcgtggaaactgcttctgctacggccacgcctccgagtgcgcgccg
atcgccggacaacccaccggagaagatggaatggttcacggtcgctgtgtgtgcaatcac
aacaccgaggggttgaactgtgaacgctgtcaggacttttaccatgatttgccttggaga
cctgcggagggacgaaatacccacgcctgcaagaagtgtgagtgcaaccggcactccacc
tcgtgtcactttgaccgtgccgtgtacacctcgaccggcgaggtgagcggaggagtgtgc
gacgactgccagcacaacacaatgggccgacagtgtgagcagtgtgtgcccttcttctac
cagcaccccagcagagatctgagagaccccaacatctgtgaaccttgtagctgcgaccca
gagggatctctgcagggcgggctgtgtgactcccacactgatgtggccgctgggctgata
tcaggtcagtgccggtgcagagtcaacgttgagggagaacgctgtgatcactgcagacag
ggacactacggactgggacaaagtccagatggctgtctgccatgtacctgcaaccccctg
gggacggtgccaggaggaaacccctgtgagccagaagcaggacgatgcttctgcaagcga
cttgtcagcggacacaactgtgaccggtgccggcctgagcactggggactgtcgaacgac
atggacggctgcaggccatgtgactgtgaccaaggaggcgccgtcgacaacaactgcgac
cctcactcgggacagtgcatgtgccgggagcacatgttcggacgtcgctgtgaccagatc
gagcccggattctacttcatcgctctggaccactacacttatgaagcagaggaagccagt
cacggatctggagtcaaactggaacagaggccgtacccccagaaccgaaaccccacatgg
actgggatggggttcgctaacgtcccagaaggaacgtttctggagttccacgtcaacaac
atcccagagtcgatggactacgatattctcattcgctacgagccacagctcccacagcag
tgggaagaggtggacgtccgagtggagcgtcccgtcttccaccctcccaaccactcagct
cactgcagagacgccctccaggctgcagatgaacagtctctctctctcccacctggatcc
aggcacgtgctgctggtgacgccggtgtgcttcgagaaaggactgaattacacgatacgt
ctttctttcccattttactcatcagtcagcagcgtccagagtccgtacacgctcatcgac
tccttggtgctaatgcctcgagtcagagagctggacatgtttggtgggacggacggtgaa
gaggcgtgggagacgttccagcgctacagatgtttggaaagcagccggagcgtcgtcaaa
agcccgatgacggacatctgtcaccattacatcttcagtgtgtctgctctgctccacaaa
ggagccatggcatgccagtgtgaccctcagggatctctgagtgccatctgtgagtcgaac
ggcggtcagtgtcagtgtcgacccaacgtggtcggtaggaactgtgatcactgcgctccg
gctacgttccttttcagtcccgctggatgcagatcttgtggctgtgactctctgggctcc
gtcagccctttctgccatgaggcaacgggtcagtgtgagtgtgtcccgggtgcaacgggt
cgccagtgttcccactgtctgcccgggttctggggtttccctcactgccgaccgtgttca
tgtaacggtcacagcgagagctgccacccccagactggagagtgtcagggctgcagggac
ttcaccaccggacatcactgtgagaggtgtatgaatggttaccatggtgacccacagctg
ggttcaggtggccactgtcgcccctgcatgtgtccagaggggccacggagcgcccgtcag
tttgcagagagctgttaccttttaaccaaccagctggtgtgtgtgtgcagccctggctac
aaaggagacaggtgtgatgagtgcgccccaggttaccatgggaaccctctgattcccgga
ggacagtgcatgccctgtcagtgtaacaacaacattgacatgcatgaccccgggtcctgt
aatgcccgcacaggtgcctgtctcaaatgtcttcaccacacacagggccgctcctgccag
aactgccaacagggttactatggcaacgccgccacgcaaagctgcaggaagtgtgcgtgt
tactcagccgggacggcacctcgggcctgttcctcccctgatgactgtgagtgtgagcag
cgtagcggccagtgtccctgtcagcccaacgtggtcgggcagaactgcgaccgctgtgct
cctgatacgtggaacattgccagtgggacgggttgccagccttgcgactgccaccctgtc
cactcctatggctcctcgtgcgacgaggttacaggacagtgtgtgtgcaagccaggattt
ggaggccagacgtgtcgggagtgcagagagcttttctggggagatccagaggtcaaatgt
caggcctgtgactgtgaccctcggggaatctccagtgagcagtgccaccgagccactggc
gactgcacctgcatggagggcgtttcgggtccgaggtgtgataagtgtgccagagaccac
tggggggacttcccctcctgcgagccctgccatcagtgttttggtgtctgggacacggtg
gtcagcgagctgaccaatcagactcgacgtctggagtcccaggtaacacagctgcttacc
agcggagtgacggcgccgtacaaggagctggtcagcagcttggagaaaaacgccaaggct
gtgagagagctagtggagaacaagacggctgcggtgaagctggagaaggtacaagacctg
acacaccagattacgggtttgatggcgttcctcagcgggaagctgaacaccacagaggaa
gacctggaccttgtctttcatgacaagaacatcacagataaggatttagatgatctgacg
gatgaggccaccatgctggagaaaaaggtggaagagctgagacagcaggtctacaatgcc
aagaacgccaacatccacggagccatgaacactatttctgctgcatatatggagtcccaa
aatgcagagctacgttcaaatgcctccagcagcgatccaggcaacacgatagagcagtca
gccgcagtacggaaagccacagaggacaaactcagcagcagtcaaagggaatttgaccgc
aaacaccaaagaaatgaacagaagctggaaaaactgtccaacgagctgaaaattttggac
atgtccccgcttagtgagaagatgtgtggcggtgcagctggagctgaaggtgagggctgc
gctccctgtggtgggctgggttgtgtcggggaaaatggagcgccacactgtggaggagag
ggatgcagcggcctcatcacaaagtctaaaaatgttcttaaggtgtcccagaacctggac
caggagatccaagaggctgtgcaggaggtggacaagctctccaggatggtgtgggacgcc
aacatgcgtgctaatgaggccaaggtgaaagcgatggaggtgttgatcaagtccaaccga
agcagagagagagttgaggagagcaacgaccagctccgcaacctcatccaggagatacga
gaacttctctccaatgacaaagcagacaagtcggtgatcgaggcggtggccaatgacgtc
ctagctctggagatgcccacatctgcgaaaaaactacaggagctgacaaacgagatcagg
gagaaggtcagcactctgaccagcgtggagacgatcctcagtcggagcgcagaggacgtc
caagctgcagagtccctcttgagacaggccaaagcagccagtgaggaagcgtcaaacttg
aaggagaaatcagacgcggtgaacgcagcactgaacgagactgagcatgctcagaacacc
accctgcacgccatcctgctggctcagaaaaacatcgcaggaacgttgcagctgctgaac
tctgctgagacggagacagagaagtccgagctgaagctcagcaacaccacgggccgtctg
gtgcagctggagcgggaggtcggcctgctgaggcagaacatcctggaaatgaaccagaag
gtggaaacaactgaacggatcaccgagcaggccagacagaacgctgaggaggcgcagcgg
gagttcgatgacaaggtcaaagatcagtttgaggtgatggaggagcaaatggtggataaa
ggggagtcggtgctgcaggcaagaaggagagcagatgaactgcagcaagaagccagagag
ctgctggagcagagcagcgagaagctgcagagactcggagagctggagaactcttatgaa
gccaatcagcacatcctggagatcaaagctgcagagctggatgagctagaacaaactgcc
cgccgcatcctggacgagatgagccaaaaagtgacccagtacatctcctgtcagaattaa
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