Nothobranchius furzeri (turquoise killifish): 107387429
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Entry
107387429 CDS
T05163
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04382
Cornified envelope formation
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107387429
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107387429
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107387429
Cell adhesion molecules [BR:
nfu04515
]
Cadherins
Major cadherins
107387429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
RibLong
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
107387429
NCBI-ProteinID:
XP_015817882
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All DBs
Position
sgr12:complement(7555597..7581503)
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AA seq
1378 aa
AA seq
DB search
MITFQFYSSNMRLFLLLALFLMISTAAEEQKTLKRTRREWILPPAKLYENTDYTDREFIA
KIRSDREVQSTVEYYLTGPGADQPPYNLFKVDHHTGFITVTGLLDRETHPSFNLTGIAKY
KDGSKAEDNIPLTVTVLDVNDNPPYFTLHTGNVSESSKKGTLVMKIEAKDDDQAGTINSE
IHYTIVSQEPKDKGQMFYINPKTGDLFVNDPALDREKHDFYKLVVKGTDMGGAPEGKSGT
GTVEIKVLDINDNIPTLEKSEYAGSVDENVADVVVMRIKALDKDLAKTDNWLTVFTIAKG
NEDNLFSIETDKETNEGILKLIKPVDFEEVQNLELGLLIENVAPFVEGGPVIMDVDVQVG
EGGAGAAAGAGVGAGLGAGLGAGLGAGLGLGADLGLGLGLDADLDLDVDVDLDGELDAGL
DAGLDAGLDAGLDAGLKPDLGLKPVKPAGGLKPVAGPGVGVGLKPGIKPGPGGKPKPDKP
KSYPIKINVNNIPEGPAFVPKTKQIPVSEDPNDAPQDGVIAVFAAVDPDTKKPAEHVSYA
KFYDPDNWFTIDEETAEIKLNKVPDRESPFLVNGTYVAKILAITKDMPAKTATGTIAIQV
ADSNDQCPTLTASRSSLCSDEKTVHVTAFDGDAFPNAAPFTFKILPDGTKGKWNVEVINE
TTAAFHSADMLWPGVYELQLEVMDAQGYSCPTDEKFTVEVCTCLGKQDCQSAKAARHGSN
ASNFSSHAIGPIITASIFLLLIPALLIFCQCGGPHTIFADQFSDMPFDTKEHLIQYQTEG
IGNDQDVPFVALPVSQSFRQKTEAAHGLNFNNFSKGINETYIETYNENDQMLGEIPQNLM
EADNIYKYARDAYNSNDMATFSWQTSNHHQTAAFEEDFALPDAFLYEYYSQKAQIDVPGT
DLLLPFALEDKLSTAGSLSLISFGESDDDLEFLNDVGLKFKTLAEVCSPPGTISKSLLDS
KTRGLETRSFKTAFGRPEPVFKAKVERDVETKRTDVKMEKVVSSTNVLNSSVSSVDTAST
SMTLPHSRVRNVSRSASFSHSATLPYPNQTVVLQQQPIYYTTSPVLQPMHYIVQPNPQNM
LLVEDGAHGANIQGMFLVNDSQNLSRLVLGGTQSSLSGQVVQDSEGFGSPISPASPISPV
RTAMFLSSSAMSQGLLPVDGCNVMGPNAAGTYVLVQSNNGPGEIEEKNPGSPEGALPTDA
NLVEQTAPPQGVLGLAVMETNYSHLLCSIAVVNEGDFVQNWYLGIIRFSQKGHTSSITKQ
SFLTRQPQMWLGYLEVIDIRPYIDSVPQSLLKDNISIKVSNNRGCPLECSVTQGAGVGAR
SARVQDRLGVLRLPMTSKYGKPTRTKYTTHLYCWKEFSSLVWNPRLGIESPAGGHTPS
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtttcaattctactcctcaaacatgagactgttccttctactagcgctgttc
ttgatgatcagtacggcagcagaagagcagaagactttgaaaagaactagaagagagtgg
atccttcctccagccaagttgtacgagaacacggattacaccgacagggaattcatcgca
aagattcgatctgatcgagaggtgcaatccacggtggagtattacctcacaggaccaggt
gctgaccaacctccatacaacctcttcaaggtcgaccaccacaccggatttataaccgtt
acgggtcttcttgatcgagagacacacccatccttcaatttaacaggcatagctaaatac
aaagacggatccaaagctgaggacaatattccactgactgttactgtcctggacgtgaat
gacaatcctccttactttaccctacacactggcaatgtttcagagagcagcaagaaagga
accttagttatgaagattgaagctaaagatgatgaccaagctggaacaatcaattcagag
atccattacaccatcgtcagtcaggagcctaaggacaaaggtcaaatgttctatataaat
ccaaagactggggatctctttgtcaatgacccagcactggacagagagaaacacgacttc
tacaaactggtggtaaagggaacagatatgggaggtgcaccagaaggtaaaagtggaaca
ggaactgtggagatcaaggtgttggacatcaatgacaacatccccactctggaaaaatct
gagtatgctggctctgtggatgaaaacgttgctgatgtagttgtgatgagaatcaaagct
ctggacaaggaccttgcaaagacagacaactggctgaccgtctttacgattgccaaagga
aatgaagataatctattttccatcgagacagacaaagaaactaacgaggggattctgaag
ttgatcaagcctgtagactttgaagaagtacagaatcttgagcttggcctcctcattgag
aatgtagctccttttgtagaaggtggtcctgtaatcatggatgtggatgtccaggttgga
gaaggtggggctggagctgcagctggagctggcgttggggctggacttggagcaggactt
ggtgcaggacttggagctggtctgggacttggggcagatttaggactaggcttgggattg
gatgcagacctagatttagatgtagatgttgacctggatggagaattagatgcagggttg
gatgcagggttggatgcaggattggatgcagggttggatgcaggacttaaacctgattta
ggacttaagcctgttaagcctgctggagggctcaagcctgtcgctgggcctggagtgggt
gttggactaaagccaggtatcaaaccaggaccaggaggcaaaccaaagccagataaacca
aaaagctatcctattaaaattaatgtaaataacatcccagagggtccagcatttgtaccg
aaaaccaagcagattccagtatctgaagaccccaacgatgcaccgcaagatggcgtgatt
gctgtatttgctgctgttgacccagacacaaaaaaaccagctgagcatgtcagttatgcc
aaattctatgatccagacaactggttcaccatcgatgaggagacagctgagatcaaactc
aacaaggtgccagacagggagtcgcccttcttagtgaatggcacctatgttgccaaaata
ttggcaataaccaaagacatgccagcaaagacagccacggggacaatagccattcaggtt
gctgactccaatgaccagtgtcctaccttgacggcttctcgcagcagtctgtgctctgat
gaaaaaactgtgcacgtcaccgcctttgatggagatgcttttcccaacgcagctccattc
acttttaaaatcttaccagatggtacaaaagggaagtggaatgtagaagtcatcaatgaa
acaactgctgcatttcactcggctgacatgctgtggcctggcgtgtacgagctgcagttg
gaagtgatggacgctcagggctattcctgcccaaccgatgagaaatttacagtggaagtc
tgtacctgtcttggaaaacaggactgccagagcgcgaaggctgctagacacggaagcaac
gcatctaacttttcttcacatgccattggcccaatcataacagcatcaatcttcctgttg
ttaatccctgccctcttgatattctgccagtgtgggggaccacataccatttttgcagac
cagtttagtgacatgccctttgacactaaagaacacctcatacaatatcagacagagggt
ataggcaatgaccaggacgttccattcgttgctcttcctgtttcgcaaagcttcaggcaa
aaaactgaggcagcacatggtctgaatttcaacaacttctccaaaggaatcaatgaaact
tacattgaaacttacaatgaaaatgaccagatgcttggggaaattccccaaaacctgatg
gaggcggacaacatctacaagtatgcaagagatgcatataacagcaatgatatggcaaca
ttcagctggcaaacatcaaatcatcatcaaacagcagcttttgaagaagactttgccctt
cctgatgctttcctttatgagtactactcccagaaagcccagattgatgtaccaggtacc
gaccttttgttgccatttgctctcgaggacaagctctctacagctggctcactgagccta
atcagttttggagaatctgatgatgacttggaattcctcaatgacgttggactaaagttc
aagacgctggccgaggtctgctctcctcctggaaccatttccaaatccctcctggatagt
aagactagagggcttgagactagaagttttaaaacagcatttggtaggcctgagccagtc
tttaaggccaaggttgagcgtgatgttgagacaaaacgtactgatgtgaagatggaaaag
gtagtatcatctactaacgtcctaaattcatctgtcagttcagtagacacggcctccaca
tccatgaccttacctcactctagagtcagaaacgtcagtcgtagcgcaagcttcagtcac
tctgctacgttgccttatccaaatcagacagttgtactacagcagcagcccatctactac
accaccagtccggttctccagccaatgcactacatagtccaaccaaacccacagaacatg
cttttggtggaagatggggctcatggagccaacatacaaggcatgtttttagtaaacgac
tcgcagaatctatctagacttgtgctgggtggaacccaaagctccctttctgggcaagtt
gtccaggattctgagggttttggaagtcccataagtcccgctagccccataagtccagtc
aggaccgccatgtttctgtctagttcagccatgtcacagggcttactccctgtagacggc
tgtaacgtgatgggtcctaatgcagctggtacttatgtgttagtccagagtaataatggg
ccaggtgaaatagaggagaagaatccaggttcacctgagggcgctttgcctacggatgct
aacctggtagaacagactgctccccctcagggggttttaggcttggcagtcatggagact
aactacagtcacctactttgttccattgctgttgtaaatgagggtgattttgtacaaaat
tggtatttaggaataattagatttagtcagaaagggcacaccagttccattaccaaacag
agttttcttaccaggcagccacaaatgtggttgggttatttagaggtaatagatataaga
ccatacattgattcagtgccacagagtttattaaaagacaacatatccatcaaagtttca
aacaacagaggatgtccccttgaatgcagtgtgactcagggagccggtgtcggtgcaaga
tctgctcgggtgcaagatcggctcggggtccttcgactgccgatgacgtcaaagtacggc
aaacccactcggacaaaatacactacacatctatactgttggaaagaatttagcagtttg
gtctggaatcctcgactaggtatagagtcccccgctgggggccataccccttcatag
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