Nothobranchius furzeri (turquoise killifish): 107387486
Help
Entry
107387486 CDS
T05163
Symbol
syde1
Name
(RefSeq) rho GTPase-activating protein SYDE1 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107387486 (syde1)
Membrane trafficking [BR:
nfu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
107387486 (syde1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
107387486
NCBI-ProteinID:
XP_015817963
UniProt:
A0A9D2XLX9
LinkDB
All DBs
Position
sgr12:12157364..12176559
Genome browser
AA seq
968 aa
AA seq
DB search
MAEPLLKRTFSRLRGKDRSRRKTDPKLSDVQVFSETTQTSSSPSSPTLSTSPRTSTAPKS
EPPSPPRSNITVAKKQQWARQGAAGQLSCLSSAPKPSDWQPSGVLQDASEPIWTQRLGLD
QNQQSLDRMPRCFPVTPTQLEASQPTGGFSDIPTSVVSNKLSGQRAYLQSLDRSSRAWVL
SSGKSQAAEDVRGPLEDRSSNIWYNPIPEEEDAGGPHKEEEVWRKRDEKVEGGQAGMSDP
KKGDCCSECPLEGATSKTSHQTNDVKTETTDSPPADTSPASQKKGGGSGSVMDRLRSPGT
VRRLSLKMKKLPELRRKLSLRSSSRAHRQGSNSTEGDESTNKNAGSSSVLSNQNVISRYH
LDSSAPPARPLRRSSRRSGSKGGYLSDGDSPELLPRQQGPDLASHHEPPCDVSSFQLYVG
SDPPRCSQRITGLLTIHLLGLEEMKTTRSEDSKEVFLAIQIDGVTRARTALLTLRGPALP
LNHTFHLELERARQLRVVVLTPACLSAVGGAKPGSDQSHLSEGSTRNRVCCLGGVSIPPL
FKGSRSQQLCVKLEPRGLLYVKLSLQEKWDAQQHRGDASAPTNVFGVELHHLVEKEKSAT
PVPLVIQKTVAEIEQRGLKVVGLYRLCGSAAVKKELRDWFERNSSAVCLSEDLYPDINVI
TGILKDYLRELPSPLITRTLYQVVREAMKHQPPPVASDPQLAQSTVQLLSCLPPPEKATL
SLLLDHLSLVASFSSFNRMTHQNLAVCFGPVLLTPTQDVWKSGGTGRASRGIGKVFSPGD
EMASAVDFKRHIEALHYLLQLWPVPTHQVPADDYSEPTPPTSPILTQNPLGRLSQQRRPV
MRLALSPNLEGEVVVSRRGRSGLTRMESPPPVNRYAGDWSVCGRGLLSGQEADYDEVAGS
ESDEGSGEEEEGEAQKQVWSSGVAGGGLFVDEYMDFDAPFNCRLSLKDFDTLIHDLDREL
AKQINICL
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcccctgctgaagaggaccttctccagattaagaggcaaagacaggagtcgc
aggaaaactgaccccaaactgagcgatgttcaggtcttctctgaaaccacacagacttct
tcctcaccatcatctccaactctgtcaacctcacccagaacatcaacagcaccaaaatca
gagcccccctcgcctcctcggagcaatatcactgttgctaagaaacagcagtgggcgcgg
cagggagcagcaggtcagctctcctgtctgagctctgcccccaagccctctgactggcaa
ccatcaggggtgttacaggatgcatctgaaccaatctggacccagaggttgggactggac
cagaaccagcagtctcttgacaggatgcctcgctgttttcctgtcaccccgacgcaactg
gaagcctcccagcctacagggggcttcagtgacattcccacgtctgttgtcagcaacaaa
ctgtctggccagcgtgcctacttacagagcttggaccgcagcagccgagcatgggtcttg
tcttcaggaaagtctcaggctgcagaagatgtgcgtggtcctctggaggaccgaagcagc
aacatctggtacaatcccatccctgaggaggaagatgcaggaggcccacacaaagaggag
gaggtatggaggaaaagggatgaaaaggtggaagggggacaagcaggaatgtctgatcca
aaaaaaggagattgttgcagtgagtgtccactggagggtgccacctcaaagaccagtcac
cagacgaatgatgtaaaaacagaaaccacagattctccccctgcagacacaagccccgcc
tctcagaaaaaagggggagggtctggtagtgtgatggacaggttgaggtctcctggtaca
gtgaggagactctctttaaagatgaaaaaactacctgagctgcgtcgaaaactcagcctt
cgttcatcttcccgtgctcaccgccagggaagcaacagtacagaaggggatgagtcaacc
aataagaatgcaggatcatcttcagtgctgtccaaccagaatgtcatcagcagatatcat
ctggatagttctgcacccccagccagaccgctgagacggtcgtccagacgttcaggcagc
aaaggagggtatcttagtgatggagattcccctgagctgctgccacggcaacaaggccct
gatctcgcatcacaccacgaacctccatgtgatgtgagttcatttcagctgtatgtgggt
tctgatccaccaaggtgcagccagaggattacgggtttactgaccatccacttgctgggt
ctggaggagatgaagaccaccaggtcagaagacagtaaagaggtcttcttagccatccag
attgatggagtgactagagcgaggactgccctactgaccctacgaggccctgccctccca
ttaaaccacacctttcaccttgagctggagagggcccggcagctccgtgttgtggtttta
acaccagcctgtctgtcagcagtgggaggagctaaacccgggagcgaccagagtcatctg
tcagaaggttctaccaggaaccgagtgtgctgcctgggtggcgtttccatcccgccactc
tttaaagggagtcgtagtcagcagctctgtgtgaagctggagcccaggggacttctttat
gtcaaattgtctttacaggaaaaatgggatgcccagcagcaccgtggagatgcatctgca
cctaccaatgtgtttggggttgaattgcaccacctggtggagaaagagaaatctgcaact
ccggtgcccctggtgatccagaaaacggtggctgaaattgagcaacggggactgaaggtg
gtgggtctgtaccgactgtgtggttctgctgctgtgaagaaagagctcagagactggttt
gagaggaacagttcggctgtctgtctgtcagaggacctctaccccgacatcaatgtcatc
acaggtattctgaaggactacttgcgtgagctgccatctcctcttatcaccaggactcta
tatcaagtagtccgagaggccatgaaacatcaaccccctcctgtggcctctgacccccag
ctggcccaaagcacagttcagcttctgtcctgtctgccacctccagagaaggccacactc
tccctcctgctggatcacctcagcctggtggcgtccttcagctccttcaacaggatgacc
caccagaaccttgcagtctgcttcggcccagtactcctcacgccaacccaggatgtgtgg
aaatcaggaggaacagggagagcaagtagaggaattgggaaggtcttcagtcctggtgat
gagatggcgagtgcggtagacttcaaacggcacattgaggcattgcactacctcctgcag
ctgtggccagtgccgacccatcaagttccagcagacgactacagtgaacccacccctccg
acctcacccattcttacccagaatcccctgggccggttgtcacagcagcgccgacctgtc
atgcgactggccctgtctccgaacctggaaggggaggtagtggtatcacgtcgagggcga
agcggattgacccggatggagagtccaccgccagtgaaccgatatgctggagactggagt
gtctgcggccgcgggcttctgtctggacaggaagctgactacgatgaggtggcaggaagt
gagagtgatgaaggaagtggggaagaggaggagggagaagcacagaagcaggtgtggtcc
tcaggggtagcaggaggtggtttgtttgtagacgagtatatggattttgatgctccattc
aactgccgactcagcttaaaggacttcgacaccctgatccacgacctggaccgagagctg
gccaaacagatcaacatctgtctgtag
DBGET
integrated database retrieval system
