Nothobranchius furzeri (turquoise killifish): 107387613
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Entry
107387613 CDS
T05163
Symbol
myo1d
Name
(RefSeq) unconventional myosin-Id isoform X1
KO
K10356
myosin I
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04519
Cadherin signaling
nfu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
107387613 (myo1d)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107387613 (myo1d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107387613 (myo1d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107387613 (myo1d)
03036 Chromosome and associated proteins [BR:
nfu03036
]
107387613 (myo1d)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107387613 (myo1d)
04147 Exosome [BR:
nfu04147
]
107387613 (myo1d)
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107387613 (myo1d)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Others
107387613 (myo1d)
Others
Actin-binding proteins
Myosins
107387613 (myo1d)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107387613 (myo1d)
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107387613 (myo1d)
Exosome [BR:
nfu04147
]
Exosomal proteins
Proteins found in most exosomes
107387613 (myo1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
Zeta_toxin
Sigma54_activat
AAA_22
NPHP3_N
AAA_16
TsaE
Motif
Other DBs
NCBI-GeneID:
107387613
NCBI-ProteinID:
XP_015818138
LinkDB
All DBs
Position
sgr12:13257328..13402950
Genome browser
AA seq
1004 aa
AA seq
DB search
MAEHESLEFGKADFVLLDTVSMEEFMANLKLRFEKGRIYSYIGEVVVSVNPYRAMNIYGR
DTIEQYKGRELYERPPHLFAIADAAYKAMKRRNKDTCIVISGESGAGKTEASKYIMQYIA
AITNPNQRAEVERVKNMLLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGH
INNYLLEKSRVIFQQEGERSFHSFYQLLSGAPDSLLHSLHIKKDPKAYTYIKIGGQIKTS
INDNADFKAVADAMKVIGFTGDEIQTVYKILATILHLGNLTFGVDGDVTLIENTKQVSVI
RDLLSTKEENVEKALLYRTVATGRDVIEKQHTTQEASYGRDALAKAMYERLFCWIVGRIN
DIIEVKNYDARIHGKNTVIGVLDIYGFEIFQNNSFEQFCINYCNEKLQQLFIQLVLKQEQ
EEYQREGIPWKHIDYFNNQIIVDLVEQQHKGIFSILDEACMNVGKVTDEVFLQGLDVKLA
KHAHFSSRKLSPTDKSLEFDRDFRIRHYAGDVAYSVVGFIDKNKDTLFQDFKRLLYNSSN
PVLKGMWPEGKLRITEVTKRPLTAATLFKNSMILLVENLASKEPYYVRCIKPNDVKSPLL
FEHERCRHQVEYLGLLENVRVRRAGFAYRQTYPRFLQRYKMISEFTWPNHDLPSDKEAVK
KLLQGCRFDHDVAYGKTKVFIRTPRTLFSLEEQRAEMVQRIILFLQKVWRGALARRRYRR
MRAALIILQAYRRYKVKSYIREVNRRFKNVQSMKDYGRHVKWPTPPKVLRKFEESLKSIH
SRWWAWTLIKGLSPEETLQVRAKVACLEALKSQRADLGLQRDWEGNYLKRDSPDTASSFT
LISSMLQRKDKFMRVLFSCNVRKINRFHKTENRAVLITDRHLYKMDPLRQYKPMKSIPLY
NVTGMSISSGKDQLVVFHTKDSRDLVVCLQGMVPANESRIGELVGTLLSHFKSEKRKLQV
NIASPIQCSMNGRKCTIIVEPKINQSQPDFTKSRSGYILNVPGN
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcacgagagcctggagtttgggaaggcggacttcgtgcttctggacaccgtg
tcgatggaagaatttatggctaacttaaaactcaggtttgagaaggggaggatctactcc
tacattggagaagtggtggtgtccgttaacccttaccgtgccatgaacatttatggtcgg
gacactatagaacagtacaagggccgtgagctgtacgagagacccccccacctctttgcc
atcgctgacgccgcatacaaagccatgaagaggaggaacaaagacacttgtattgtcatc
tcaggagaaagtggtgcaggaaagaccgaggccagcaagtacataatgcagtatattgct
gctattaccaatcctaatcagagggctgaagtcgaaagagtaaaaaacatgctgctaaaa
tccaactgtgtgttggaagccttcggaaatgccaaaaccaaccgcaacgacaactccagc
cgcttcggcaaatacatggacatcaactttgactttaaaggagatcccattgggggccac
atcaacaactatctgctggagaagtcccgcgtaatttttcagcaggaaggggaaagaagc
tttcactccttctaccagctgctcagtggagctccagattccctcttacactctcttcac
atcaaaaaagacccaaaggcctacacctacatcaaaatcggagggcagattaagacctcc
atcaacgataacgcagacttcaaagctgtagctgatgccatgaaagtgattggtttcaca
ggagatgagattcagacggtttataagatcctggccaccatcctgcatctgggaaacctg
acgtttggagtggacggtgatgtgaccctgatagagaacacaaagcaggtgtctgtgatc
agggacctgctttccaccaaagaggagaacgtggaaaaggctctgctttaccgcacggtg
gcgacgggtcgagacgtcatcgaaaagcagcataccacacaggaggccagttacgggaga
gacgctcttgcaaaggcgatgtatgagcgcttgttctgctggatcgtcgggcgaatcaac
gacattattgaggtgaaaaattacgacgccagaatccatgggaagaatacggtcatcggc
gtgttggacatctacggttttgaaatcttccagaacaacagctttgagcagttttgcatc
aactactgtaacgagaagctgcagcagctcttcatccagctggtgctgaagcaggaacag
gaggagtatcagagggaaggcatcccctggaaacatattgattacttcaacaatcagatc
attgttgacttggtggagcagcagcataaagggatcttctctatcctggatgaagcctgt
atgaatgtgggcaaagtcactgacgaggttttcctccaaggactcgacgtcaagctggcc
aagcacgcccacttttccagccgcaagctctcaccgactgacaagagtttggagtttgac
agagactttcgcatcaggcactatgcaggcgatgtggcgtactccgtggtgggctttatt
gataagaacaaagacacgctgttccaggattttaagagactcttgtacaacagttccaac
ccagtcctgaaggggatgtggcctgagggtaaactccgcatcactgaggtcaccaaacgg
ccgctgacagcagcaacacttttcaaaaactccatgatcttactggtggagaaccttgcc
agcaaggaaccctactatgtgcgttgcatcaagcccaatgatgttaagtcccctctgctg
ttcgagcacgagcgctgccgccatcaggtggagtacctcgggttgctggagaatgtcaga
gtgcgtcgagccggcttcgcctacaggcagacatatcctcgctttctacagagatacaag
atgatctcagagtttacatggcctaaccatgacctgccatcagacaaagaggctgtaaag
aaactcctacagggctgcaggtttgatcacgatgtggcgtatggcaaaacaaaagtcttc
attcgaacaccgcgtacgctcttcagcttggaggagcagcgagcagagatggtccagaga
atcatcctcttcctgcaaaaggtttggaggggtgcacttgccagaaggcgttaccggcga
atgcgcgccgccctcattatcctgcaggcctacagacgttacaaggtcaagtcctacatc
cgtgaggtcaaccgtcgcttcaaaaatgtgcaatccatgaaggattatggcagacacgtg
aagtggccgacgcctcccaaagtcctgcgaaagtttgaggagtcgctgaagagcatccac
agcaggtggtgggcatggactctgatcaaaggcctctctccggaggagactctacaggtt
cgagccaaagtagcctgcttggaggccctgaagagccaaagggctgacttgggtctacag
agagactgggaaggaaactacctgaagcgcgacagccctgacacggcatcatccttcacc
ctcatttccagcatgctgcagcgcaaagacaaattcatgagagttttattctcctgcaac
gtgcgaaagatcaaccgtttccacaagacggagaaccgagccgtgctcatcactgatcgg
cacctgtacaagatggaccccctgaggcagtacaaacccatgaagagcatccccctctac
aatgtgacagggatgagcatttcctcggggaaggatcagctagttgtgttccacactaag
gacagcagggatctcgtggtgtgcctgcagggcatggtacctgccaacgagagccgcatc
ggggagctggttggaactctactcagccattttaagagtgagaagaggaagctgcaggtg
aacatcgcgagtccgatccagtgcagcatgaatggcaggaagtgcacgatcatcgtcgag
cccaagatcaaccaatcacagcccgactttaccaagagcagatctggttacatcctgaat
gttcctggaaactaa
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