Nothobranchius furzeri (turquoise killifish): 107387620
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Entry
107387620 CDS
T05163
Name
(RefSeq) thyroid hormone receptor alpha-B
KO
K05547
thyroid hormone receptor alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04080
Neuroactive ligand-receptor interaction
nfu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107387620
04081 Hormone signaling
107387620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107387620
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
nfu03310
]
107387620
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107387620
Nuclear receptors [BR:
nfu03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
107387620
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107387620
NCBI-ProteinID:
XP_015818148
UniProt:
A0A9D3BDR3
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Position
sgr12:13788818..13979423
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AA seq
409 aa
AA seq
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MEHMPKEQDSNPSEGEEKQWLDGPKRKRKNSQCSMKNMTGYIPSYLEKDEPCVVCGDKAT
GYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDGCCIIDKITRNQCQLCRFKKCIAVGMA
MDLVLDDSKRVAKRRLIEENREKRKKEEMVKTLQSRPEPTVDEWDLIHHVTEAHRHTNAQ
GAQWKQKRKFLPDKIGQSPVTPTSDRDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSE
LPCEDQIILLKGCCMEIMSLRAAIRYDPESETLTLSGEMAVKREQLKNGGLGIVSDAIFD
LGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTCMDKIEKCQETYLLAFEHYINYRKHNIP
HFWPKLLMKVTDLRMIGACHASRFLHMKMECPNELFPPLFLEVFEDQEV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatgcccaaggagcaggactctaacccatcagagggagaagagaaacagtgg
ctcgatggcccaaaaaggaagaggaagaatagccaatgttcgatgaagaatatgactggg
tacatccccagctacctcgaaaaggatgagccatgtgtggtctgtggtgacaaagccact
ggttaccactaccgctgcattacctgcgagggctgcaagggtttctttcgtaggaccatt
cagaagaacctccacccctcctactcgtgtaagtacgatggctgctgcatcatcgacaag
atcacccgcaaccagtgccagctgtgccgctttaagaagtgcatcgccgtgggcatggcc
atggacttggtgctggacgactcaaagcgggtggctaagcggagactgatcgaggagaac
agagagaaacgcaaaaaggaggaaatggtgaaaacccttcagagccgtccggaaccaact
gtggacgagtgggacctgattcaccatgtgacggaggcccatcggcacaccaacgctcag
ggtgcacagtggaaacagaaacgcaaattcctgccagacaaaatcggccagtctccggtc
actcccacgtcagacagggacaaggtagacctggaggccttcagcgagttcacaaagatc
atcacccctgccatcacccgtgtcgtcgactttgccaaaaaactgcccatgttctctgag
ctgccttgtgaagaccagatcatcctgttaaagggctgctgcatggagatcatgtctctg
cgagccgccatccgctatgaccccgagagcgagacgttgacgctgagtggagagatggcc
gtgaagcgagagcagctgaagaacggagggctgggcatcgtgtctgacgccatttttgat
ttaggcaaaagtctggcacagttcaacctggatgacacggaggtggcgctgctgcaggcc
gttcttctcatgagctctgaccgttcaggactcacctgtatggacaagattgaaaagtgc
caggagacctacctgctggcgtttgagcactacatcaactaccgcaagcacaacattccc
cacttctggcccaagctcctgatgaaggtgacagacctgcggatgatcggggcgtgccac
gccagccgcttcctccacatgaagatggagtgtcccaacgaactcttccccccgctcttc
ctcgaggtcttcgaggaccaggaggtgtga
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