Nothobranchius furzeri (turquoise killifish): 107387772
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Entry
107387772 CDS
T05163
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04145
Phagosome
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107387772
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107387772
09144 Cellular community - eukaryotes
04510 Focal adhesion
107387772
09142 Cell motility
04820 Cytoskeleton in muscle cells
107387772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107387772
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107387772
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107387772
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Opsonins
107387772
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107387772
Exosomal proteins of colorectal cancer cells
107387772
Exosomal proteins of bladder cancer cells
107387772
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107387772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
107387772
NCBI-ProteinID:
XP_015818429
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All DBs
Position
sgr12:20552975..20576230
Genome browser
AA seq
954 aa
AA seq
DB search
MWPLRDLPWLLIPLCAAAVCAGASGTNVHNVSSEMCHHPCEELVDLITEIHGLRIVTNNL
LEDLERVSKENEEMRITLSELGSSNSDEGDEDNHGDNNDLDRDKDGEVWCAQDGRVYEQG
EVWEVDSCTSCSCQDGKVVCQQVLCPPVSCLNPSFVDGKCCLVCLDNEDGWSPWSEWTHC
SVTCGRGGQQRGRSCNGIMPSCSGPSLQTRSCILMKCDRKTRVDGNWGLWSPWSACTTTC
GEGNTTRVRLCNSPSPHKGGRGCKGSGRETQSCNNTVCPVSGGWTAWSEWSQCSTSCGGG
LVSRHRDCSNPAPQNGGKSCAGDAVDYDACNKQPCPIDHCLLSNPCFPGVGCTSKSDGSW
ECGQCPLGFRGNGTNCEDENECEVDGVCFTTCVNTDPGFYCLPCPPRYKGTQPFGIGLKE
ASKTRQVCEPYNPCKDNTHTCHQFADCIYLGLASEALFKCVCAVGFAGDGVLCGEDPDLD
GWPNEKLPCRQNATYHCEKDNCPMVPNSGQEDLDKDGQGDACDPDDDNDNISDERDNCPL
MYNPRQFDSDRDGVGDSCDNCPFESNPHQTDTDDNGEGDACSIDIDGDEILNENDNCPHV
YNTDQRDTDLDGVGDQCDNCPLLHNPQQLDTDSDLVGDMCDNNEDIDEDGHQNSLDNCPY
IANSNQADHDKDGKGDVCDHDDDNDGIPDNRDNCRLVPNKDQQDSDGDGSGDACVDDFDN
DSIPDALDPCPLNQDIGSTDFKKFQGVLLDPKGTTQSDPLWVIRSQGTELLQTANSDPGI
ALGYDKFSSVDFSVTFYVNTNRDDDYAGIVFAYQSSRRFYVVMWKQVSQAYWEKRPSKAF
ATAGLSIKLVHSSTGPGEYLRNALWHTGNTRNQVKTLWHDPNEIGWKDYTAYRMHLIHRP
KTGFIRVVVYEGRKILSDSGAVYDHTLAGGRLGLFVFSQEHVIFSDLRYECRDN
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctctcagagatttgccctggcttttaattcccctgtgtgcagcagctgtgtgt
gcaggtgcaagtggcacaaacgtccacaatgtctcttctgaaatgtgtcatcatccatgt
gaagagctggtggatttaatcactgagatccacggtctgcgcatcgttacaaataacctg
cttgaagatctggagagagtgtcaaaggaaaatgaggagatgcggatcactttatctgag
ctgggcagcagcaacagcgatgaaggagatgaggataaccatggagacaacaatgatctt
gacagagacaaagacggggaggtctggtgtgctcaggatggacgagtgtacgagcagggg
gaggtctgggaggtcgacagctgcacctcctgctcctgccaggacgggaaggtggtgtgt
cagcaggtgctgtgtcccccagtgtcctgcctcaatccgtcatttgttgatggaaaatgc
tgccttgtttgtctcgacaatgaagatggttggtccccctggtctgaatggacccactgc
tcggtcacctgtggacgagggggtcagcaacggggtcggtcctgcaatggtatcatgccc
tcctgctctggaccttcacttcagactcgcagctgcatactaatgaagtgtgaccgtaaa
acgcgtgttgatgggaactggggcctttggtctccttggtctgcatgcaccaccacatgt
ggagaaggcaacaccacacgggtccgtctgtgcaacagtccctcccctcacaagggaggc
agagggtgcaagggtagcggcagggagacacagtcatgcaacaacacagtgtgccccgtt
tcaggagggtggacagcctggagcgagtggtcgcagtgctccacgtcatgtggtggaggc
cttgtgagccgccaccgcgactgttcgaaccccgcccctcagaatggtgggaagtcttgt
gctggagatgcagtggactacgatgcgtgtaacaaacaaccatgtcctattgatcactgc
ttgctttcaaatccatgttttcccggggtaggatgcacatcaaaaagtgatggatcttgg
gaatgtggacaatgtccgttgggttttagaggaaacggtacaaactgtgaagatgagaat
gagtgtgaagtggatggagtgtgttttacaacctgtgtgaacacagatcctgggttctac
tgtctcccctgtcctcctcgctacaaaggcacccagccatttggcattggactgaaggaa
gcctccaaaactaggcaggtgtgtgagccatacaatccttgcaaagacaacacacacacc
tgccaccagtttgctgactgtatatacctgggcctggcgtctgaggctctgtttaagtgt
gtgtgtgctgttgggtttgctggtgatggggttctatgtggtgaggacccagatctggat
ggatggcctaatgaaaagttaccatgcaggcagaatgccacctatcactgtgaaaaggat
aattgccccatggtgccaaactccggacaggaagacttggacaaagacggacagggggat
gcttgcgatcctgatgacgacaacgacaacattagtgatgaaagggacaactgcccactg
atgtacaaccctcgtcagtttgactctgacagggacggggtgggagatagttgtgacaac
tgcccgtttgaaagcaatccacaccaaacagacactgatgacaacggagaaggagacgcc
tgcagcattgacatcgatggggatgagattctgaatgagaacgacaattgtcctcatgtg
tataacaccgaccaaagggacactgacctggacggagttggagaccagtgtgacaactgt
cctcttcttcacaacccacagcagctcgacactgacagtgacctggtgggggacatgtgt
gacaacaacgaggacatagatgaggatggacaccaaaattccctggacaactgtccctac
attgccaatagcaaccaggctgatcacgacaaggatggaaagggagatgtttgtgaccat
gatgatgacaatgatggtatccctgacaaccgggacaactgcagactggtccctaacaaa
gaccagcaggactcagacggtgatggcagtggagatgcatgcgttgatgactttgacaac
gacagcatcccggatgcgctggatccttgtcctctaaaccaggacattgggtctacagac
ttcaagaaattccaaggtgttttgttggatcctaaaggcaccacacagtcggacccgctc
tgggtgatccgcagtcaggggacggagctgctgcagacagccaactcagaccctgggata
gctttaggttatgacaagttcagctctgtagatttcagcgtgacattttacgtcaacacc
aaccgagatgatgattatgcgggtattgtgtttgcttatcagtccagtcgacgcttctac
gttgtcatgtggaaacaggtgtctcaagcctactgggagaaacggccatctaaagctttt
gccactgcagggctttcgatcaagctggttcactccagtacaggaccaggggaatatcta
cggaacgctctgtggcacactggaaacaccagaaaccaggtcaaaaccttatggcatgac
cctaatgaaattggatggaaagactacacagcgtaccgcatgcatcttatacaccggccc
aaaaccgggttcatcagggtggtggtgtacgagggcaggaagattctgtctgactcagga
gctgtttatgaccacaccctagctggaggcagactggggttgtttgtcttctctcaggaa
catgtcatcttctcagaccttagatatgagtgcagagataactga
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