Nothobranchius furzeri (turquoise killifish): 107387819
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Entry
107387819 CDS
T05163
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31B isoform X1
KO
K14005
protein transport protein SEC31
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107387819 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107387819 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nfu02044
]
107387819 (sec31b)
Membrane trafficking [BR:
nfu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107387819 (sec31b)
Secretion system [BR:
nfu02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
107387819 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_EIPR1
TPR_Sec16
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_HPS5
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Prp18
MukF_M
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
107387819
NCBI-ProteinID:
XP_015818504
UniProt:
A0A8C6NU89
LinkDB
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Position
sgr12:23424968..23441677
Genome browser
AA seq
1223 aa
AA seq
DB search
MRLKEIQRTAHQAWSPAGHHPIRLALGTSAQQLDASFNTTAAIEIFEMDFADPSLEMHLK
GSLPTTNRLHSIVWVNFGMGADCTGGRLVGGSENGSLTVYNPEAIISSGADAVVGQSDKH
TGPVRALDFNPFQSNLLASGAIDSEIYIWDLNNLSSPMTPGTKTQPAEDISVVSWNRQVQ
HILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLASEDDRLPVI
QMWDLRFATSPLKVLEKHTRGILSISWSQADSELLLSSAKDNRILCWNPNTGEVIYELPT
TNQWCFDVQWCPRNPALLSTASFDGRITVYSVMGGSLKAQQQSTVDKISSSFDTMDPFGT
GQVLPPLQVPQPTAQDTIVPPLKKPPKWVRRPVGASFAFGGKLITFENTKVPPMQSPQPI
PRQVFISQVSTETEFLQRSRELQATLQSGSFNSYCQAKIQNAKSDAEQDIWKFLLVNFED
EARIKFLKLLGFSKDELDRKISKCLGKNFQSNGFGVDAKDLAEKMQRLTTERSDDTAADA
RTSGSVSPSDFFSPKKSTHFQIPVSCDTDGLISQALLVGNFEGAVDLCLNDCRYAEAILL
SISGGEELLKKTQQKYLSKQKNSISMLISSVVTQNWRDIVESCELDNWKEALAALLTYAH
PEDFAGLCDTLGRRLEHESTEKRCLQACLCYICSGNVEKLVECWALHRDCSSPLGLEDLV
EKVMLLRKSIERLRNSEVAVQSPVLAEKLTCYASILAAEGSLSTAMAYLPDNSYQPEITM
LKDRLLHAQAEAAVQQQPPNSNRIAMPAANKTQCQPSAPAPVAPPQQPRLPSAFPPQPSP
PNPGPGLPPSSHVMPPSSTRPAVRPSYPQHPSVAPGFSCHQPFQPQPVSAAGPFSPTGPS
VPAANLSGPQLPPSLSNPGGMPPMPSPGVPPTGFLPSTSLPSGIMPPSSQPGAPVSMYQG
GFPNQGCAPPVASGPFVPFGSGYPLGGPGAPAVNPFPSSGVAPPPSGLQEGWNDPPTVRG
GPRKKKMPDNYTPPAPITAPVMGFPAEAPQPPSHTQVPPGAPQEPSVQVCLQQRAAILDF
NSKAYRGNGVILYLCTCVYQLLQQLPAERVEQREIPAEHMILKTTFDSLVQRCQLAAGDP
QTKRKLDDAGKRLGHLYDKLREQSLSHHILDGLHEISRCVASQNYQRGLEVHTQVVSSSN
FSEISAFMPILKVVITIANKLGV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaaggaaatccagaggactgcccaccaggcgtggagtcctgctggacaccat
cccatccgcctggccttaggaacgtcagcacaacagcttgatgcttccttcaacactaca
gctgccatagagatatttgagatggattttgctgacccctctctggagatgcacctcaaa
ggatcattacccactactaacaggttgcatagtattgtatgggtaaatttcggaatggga
gctgattgtacaggagggagactcgttggtgggagtgaaaatggctcgctgactgtgtat
aacccagaggccataattagttctggagcagatgcggtggttggacagtctgataaacac
acaggacctgtcagagcactcgatttcaacccgtttcagagtaatcttcttgcatctgga
gcaatcgattcagagatatacatctgggacctaaacaacttaagcagcccaatgacacca
ggaacaaaaacacagcctgctgaagacatcagtgttgtgtcctggaaccggcaagtccaa
cacatcctggcttctgccaaccccagtgggaaagcagtcgtgtgggacctgaggaagaat
gagccaattataaagatcagtgatcacagcaacaggatgcactgctcaggaatgctctgg
caccctgatgtagccactcagctggtgctagcctctgaagatgaccgactgccggtcatc
cagatgtgggacctccgttttgctacatcgcctcttaaagtcctcgagaaacacacaagg
gggattctgtccatatcttggagccaagctgactctgagcttttgctgagtagtgccaaa
gacaacaggatcctctgctggaatcctaacactggagaggtcatttatgagcttccaaca
accaaccagtggtgttttgatgtccagtggtgccccaggaatccagcccttctttcgacc
gcgtcatttgatgggaggatcacggtttattctgtgatgggaggaagtctgaaagctcag
cagcaaagcacagttgataagatctcatcctcgtttgacaccatggatccctttggtaca
ggacaggtactgcctcctctacaggtccctcagcccactgcgcaggacaccatagttcct
cccctgaagaagccacctaaatgggtgcgcaggccagttggagcttcctttgcctttggt
ggaaagctgataacctttgagaacacaaaggtgcctcccatgcagagcccacaacccatc
cccaggcaagtgtttataagccaggtttccacggagacagagtttcttcagcgctccagg
gaacttcaggcgacgctgcaatcgggttctttcaacagctattgccaggccaagattcag
aacgccaagtccgatgcagaacaggacatatggaagttccttctggtgaactttgaagat
gaggcgcgcataaagttccttaaacttttaggtttcagcaaagacgaattggatagaaag
atttctaaatgtttggggaagaattttcaatccaatgggtttggagtcgatgccaaagac
cttgcagagaagatgcagcggctcaccactgagcggtccgatgacacagcagctgatgct
cgaacttcaggctccgtttccccctcggacttctttagcccaaagaaaagcacccacttc
caaatccctgtgtcatgtgacacggacggtttgataagccaggcgctgctggttggtaac
ttcgagggagccgtggatctgtgtctgaacgactgtcgctacgctgaagccattctgctc
tccatcagtggaggggaagagcttctgaagaagacccagcagaaatacctcagcaagcag
aagaacagcatctccatgctcatttcatcggtggtgactcaaaactggagggacatcgtt
gaaagttgtgagttggacaactggaaggaagctcttgccgctctgctgacctacgctcat
cctgaagactttgctggtttatgtgacactcttggaagacggttagaacatgagagtaca
gaaaagcgctgcctgcaggcctgtttgtgctacatctgctctggaaacgttgaaaagttg
gtggagtgttgggccttgcacagagactgctcctcccctctggggctagaggatctggtt
gaaaaagtaatgttgctgcgaaagtcaatcgagcgccttcgcaacagcgaggtagccgtc
cagagccccgtcctggctgagaagctaacctgctatgctagcatcctggctgcagagggc
agcttatccactgccatggcctacctgcctgacaactcataccaaccggagatcacgatg
ctgaaagacaggctgctccatgctcaggctgaggccgctgtccagcagcagcctccaaac
tccaacagaattgccatgccagcggctaataaaactcagtgccagccctctgctccagct
ccggtggctccaccacagcagcctcgtttaccatcagcttttcctcctcagccctctcca
cccaacccagggcccggtctgcccccgtcctctcatgtgatgccgcccagttcaacccgt
cctgccgtaagaccttcctacccacaacacccctctgtggctccaggtttttcttgtcat
cagccgttccagcctcagcctgtatctgcagccgggcccttctcacccactgggccttca
gtaccagctgccaatttatcaggacctcaactgccaccttcattatcaaaccctggaggc
atgccccccatgcccagtcccggggtgccaccaacaggctttctgccatctacctcttta
ccttcaggcatcatgccacccagctcccaaccaggggctccagtttcaatgtaccaagga
ggttttccaaaccaggggtgtgctcctccagtggcgtccggcccctttgttccttttgga
tcagggtaccccctcggaggtcccggagcccctgctgtaaatcccttcccatcctctggt
gttgctcctcctccttcaggacttcaagagggttggaatgacccaccaacagtaaggggt
ggacccaggaaaaagaagatgcctgacaactacactccacctgcccccatcacagctcct
gtcatgggtttcccagcggaggctccacagccccccagccacacccaggtcccgcccgga
gccccccaggagcccagcgtacaggtttgtcttcaacaacgggctgctatcttagatttc
aacagtaaagcataccgtgggaatggtgtgatactgtatttgtgtacttgtgtttaccag
ctcctccagcagctaccagcagagagagtggagcagagagaaatcccagctgagcacatg
atcctcaaaaccacctttgatagcctggtgcagcgctgccagctcgcagcaggagatccg
caaacaaaaaggaagctcgatgatgctggaaagcgtttgggtcatctgtatgacaaactg
agagagcagtcgctttctcatcacatcctggatggccttcacgagatcagccgctgtgtg
gccagtcagaactaccagcggggcctggaggtccacactcaggtggtcagcagcagcaac
ttcagcgagatctctgccttcatgcctatcctgaaagtagtcatcactatcgccaacaag
ctgggtgtctaa
DBGET
integrated database retrieval system
