Nothobranchius furzeri (turquoise killifish): 107387838
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Entry
107387838 CDS
T05163
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03020
RNA polymerase
nfu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107387838 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107387838 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107387838 (polr3a)
Enzymes [BR:
nfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107387838 (polr3a)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107387838 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107387838
NCBI-ProteinID:
XP_015818532
UniProt:
A0A8C6NXC1
LinkDB
All DBs
Position
sgr12:complement(23798428..23833997)
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDPKRTPLPYGVLDHRM
GTSEKDRPCLTCGKQLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSSIMLTKE
EKLQFMDILKRPNLAYLQKRGLKKKISDKCRKRTVCLKCSAFNGPVKKCGLLKIIHEKFK
TNKKVVDPFVSEFLQSFDIAIEHNKLMEPLLSRAQENLNPVVVLNLFRRIPQEDIPLLLM
NPEAGKPADLIITRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPDVHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDERIRISLPRPAIVKPVTLWTGKQI
FSLILKPSKDCPVNANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVFLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YKKCDEYIEALETGKLQQQPGCSAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPNGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAGYPCPDQPALSHNELVLTSDNIMKRTDFLC
CRDNFLEELTETGSEKYLEEIKKFVKSVSERIKKTREKYGINDKGTSEPKVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIISAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCYI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPKDIAVHGEAVVCVSPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVARAVIHIDEQSGKNKYKLLVEGDNLRAVMATHGVNGSRTTS
NNTYEVERTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANK
DPTPVTRPLLFDNSDFHIPLVT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcaattcagagagacagatgtggccaagaaaataagccacatctgcttc
ggcatgaaatctgctgagcagatgcgacagcaggcccacatccaggttgtcagcaagaat
ctgtacagccaagaccccaaacgcactcccctgccttatggagtgttggaccatcgaatg
ggaaccagtgagaaagacagaccatgtttgacgtgtgggaagcagctggccgattgttta
gggcattatggttatctggatctggagctaccatgctttcatgttggctatttcaaagcc
actattggaatcctacagatgatttgcaagacatgttcaagcataatgctgacaaaagag
gagaaactgcagttcatggatattttgaagcgaccaaacctggcttatctccaaaaacga
gggctgaagaagaagatatctgataaatgtcgcaaaaggacagtctgcctgaagtgttca
gcttttaatggacctgtgaaaaagtgtggcttgctgaagatcatccatgagaagtttaaa
acaaacaagaaagtggtggacccgtttgtgtccgagttcctgcagtcctttgatatcgcc
atcgaacacaacaaactaatggagcctctattgtccagagcacaggaaaacttgaatcct
gtggttgtccttaacctgttccggagaatccctcaggaagatatccctctgctgctgatg
aacccagaggctgggaagcccgctgatctcatcatcactcgtctcctcgtgcctcctctc
tgcattcgaccctctgtggtcagcgacctgaagtctggcaccaacgaggatgacctcact
atgaagctgacagagatcatctttcttaatgatgtcatcaaaaagcatcgcatgacgggg
gcaaaaacccagatgataatggaggactgggatttcctccagctgcagtgtgccctttac
atcaacagtgagctctctggcatccctctcaacatggcacccaaaaagtggaccaggggc
tttgtgcagaggctgaagggaaagcaaggtcgattcagaggaaacctctctgggaaacga
gtggacttctcaggcagaaccgtgatttcccctgatccaaacctgaggatagacgaggtg
gccgttcccgttcacgtggccaagatcctcacgtacccagagagggttaacaaagctaat
ctggagctgatgagaaaactggtccgtaacggccctgacgttcatcctggagccaacttc
atccagaaccgtcacacgcagatgaaaaggtttttgaaatacggcaaccgtgaaaagatt
gctcaggagctgaggttcggtgatgtggtggaaagacatctgatagacggagacatcgtc
ctcttcaatcgacaaccttctctgcacaaactcagcatcatggcccacattgcgagagtc
aaaccacacagaacgttccgtttcaacgagtgtgtgtgcacgccgtataacgccgacttt
gacggcgatgagatgaacctccatctgcctcagactgaagaagccaaagccgaagccctg
gtcctgatggggaccaaagccaatctagtcacaccaagaaatggcgagccgctgattgct
gctattcaggactttctgacaggtgcgtacctgctgacgctgaaggacaccttctttgac
agatccaaagcctgccagatagtagcatcgattcttgttggcaaagatgagagaattagg
atttctctccctcgcccagctattgtgaagccagtcactctgtggacgggtaaacagatc
ttcagcttgattctgaaacccagtaaggactgtcccgttaatgcaaacctgcgcaccaaa
ggcaaacagtactgtggcaaaggagaggatctctgtcacaacgactcctttgttgtgatc
cacaacagcgagctgatgtgtggcagcatggacaagggtaccctgggatctggctccaag
aacaacattttctacatcctgctgagagactggggacagctggaggccgccaacgccatg
tcccgcctggcgaggcttgctccggtctttctctccaacagagggttttctattggaatc
ggtgatgtgacccctggtcagggtttgctgaaggccaagcaggacctactggatgatggc
tacaagaagtgtgacgaatacatcgaagctttggagacggggaagttacagcagcaaccc
ggctgctcagcggaggagactctggaggcacttattttgagagagctgtctgtaatcaga
gaccgagctggcagcgcctgtctcagggagctcgacaagagcaacagccccctcatcatg
gctctctgtggttccaaaggatccttcattaatatttcccagatgattgcctgtgtggga
cagcaggccataagtggctctcgagtccctaatgggtttgagaaccgctccctgcctcac
tttgaaaaacactccaaactgcctgctgctaaaggctttgtagccgacagcttctactct
ggtctgacgcccacggagttcttctttcacaccatggctggtcgagagggtctggtggat
accgctgtgaaaaccgccgagacgggatacatgcagaggcgtctggtgaaatccctggaa
gatttgtgctctcagtatgacctgacagtgcgcagctccactggtgacatcatccagttt
atttatggcggtgatggtctggatccagctgcaatggaaggaaaagatgagccgcttgag
tttaagagagtgctggacaacatccgggcgggctatccgtgcccagaccagcctgcgctc
agtcacaacgagttggtcctcacgtcagacaacatcatgaagagaaccgacttcttatgc
tgcagagacaactttttagaggaattaactgagactggctcagagaagtacctggaggaa
ataaagaagtttgtgaagagtgtgtcagaacgaatcaagaagaccagagaaaagtacggc
attaacgacaagggcacgagtgagccaaaggttctgtatcagctggaccgcattactcca
actcagctggagaagttccttgaaacctgcagagataaatacatgagagcccagatggag
ccgggctcagcagtaggtgctctgtgtgctcagagcatcggagagcctggcactcagatg
actctgaaaacttttcactttgctggcgtggcatcaatgaacatcacgctaggagtgcct
cgcatcaaggagatcattaatgcctccaagaacataagcacccctataatctcagctcat
ttggacgtcgaagatgacgccgactttgcgaggctggtgaagggaagaattgagaaaact
cttcttggagagatttcagagtacatcgaggaggtgtttcttccagatgactgctacatc
cttgtaaaactctcactggagagaatccggctgctccgattagaggtgaacgcagaaacg
gtgcgctactcaatatgcatgtcgaaactgcgagtgaagcccaaagacatcgctgttcac
ggtgaggcggtggtctgcgtgtctcctcgagaaaacagcaagagctccatgtactacgtg
ctgcagtcgttaaaagaagagctccctaaggtggtggtccagggaatacctgaggtcgcg
cgggccgtcattcacatagacgagcagagcgggaagaacaagtacaaactcctggtggag
ggagacaacctgagagctgtcatggcaacgcacggggtcaacggtagtaggaccacttcc
aacaacacatacgaggttgagaggactctaggcattgaagctgctaggtccaccatcatt
aatgagatccagtacaccatggtgaaccacggcatgagcatcgaccgccgacacgtcatg
cttcttgcagatctcatgtcctacaagggggaaatccttggaatcaccaggtttggttta
gccaaaatgaaggagagtgtcctcatgttggcctcgtttgagaaaactgctgatcatctc
tttgacgctgcctacttcggacagaaggactccgtctgcggtgtgtctgaatgtatcatt
atgggaattcccatgaatattggaacaggactgtttaaactcctacacaaagccaacaaa
gatcctactcccgttacgagaccgctgctctttgacaattcagactttcatatacctctt
gtcacatag
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