Nothobranchius furzeri (turquoise killifish): 107387848
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Entry
107387848 CDS
T05163
Symbol
kcnma1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
107387848 (kcnma1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107387848 (kcnma1)
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
107387848 (kcnma1)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
107387848
NCBI-ProteinID:
XP_015818552
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Position
sgr12:24305429..24417645
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AA seq
1225 aa
AA seq
DB search
MAGDHKSIMAKNGGGPAVKDPSDHFTLFVPSHDVRCDIANQKMWWAFLASSMVTFFGGLF
IILLWRTLKYLWTVCCHCNAKKKEVHRITTGDGIKRADREDAAASEVGWMTSVKDWAGVM
ISAQTLTGRVLVVLVFALSIGALVIYFIDSSKPIESCQNFYKDITLQTDMAFNVFFLLYF
GLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLSRSWLGLRFLRALRLIQFSEILQFL
NILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWESFKNSQALSYWECVYLLMVT
MSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKH
IVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGS
VLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYH
NKAHLLNIPSWTWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTW
QKYYLEGVANEMYTEYLSSAFVGLSFPVICELCYVKLKLLLIAIEYKSDQRESSTLINPG
NHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKKLIYSKNSYNGYI
KSIEEDQQSALSPKKKQRNGGTRNSPNSSPKIMRHDPLLIPGSEQIETMDENIKKYDSTG
MFHWCPSKDIEKVLLTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNFVMPLRASNFHYHE
LKHIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNI
DDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPENSPVHGLVRQTSV
TTGANIPIITELAPLAKQGKKLPVISLSQDKSCGTSIQMITELVNDSNVQFLDQDDDDDP
DTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENAL
RGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRD
AHLNTQSQCTKRYVITNPPYAFELVPSDLIFCLMQFDHNAGHSRTSLCHSSHSSHSSSKK
SSSVHSIPTANRTNRTKSRDLRDKQNATMINRVGQEKTWFTDEPAKTHLRTMQLRPVNTL
TVNQISQNKPTSSLIQPIREAEDEC
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgaccacaagtcaataatggcgaaaaacggaggaggacccgccgtcaaggac
ccgtcagaccacttcacgttgttcgtcccgtcgcacgatgtgcgctgtgacattgcaaac
cagaagatgtggtgggcctttctcgcctcctccatggtgactttctttgggggtctcttc
atcatcctgctgtggagaaccctcaaatatctgtggaccgtgtgctgccactgtaacgcc
aaaaagaaggaggtacaccgcatcaccacaggagatggcatcaagcgtgcggatagagaa
gatgctgcggcgagcgaggtgggttggatgacctctgtgaaggactgggctggagtcatg
atatccgcccagacgctgacgggaagagtcctggtggtgctcgtttttgcactcagtatt
ggagcccttgtaatatacttcatagattcctccaaacccattgagtcctgtcagaacttc
tacaaagacataacgttgcaaaccgacatggcgttcaacgtctttttcttgctttatttc
gggctacgtttcattgctgctaatgacaagctttggttctggctggaggtgaactcggtg
gtggacttcttcacggttcctccggtgttcgtgtcggtgtacctgagcagaagctggctt
ggtttgaggtttttaagggccttaagattgatacagttctcagaaattttacagtttttg
aatatactaaagacaagcaactcgattaagctggtgaacttgtgttcaatcttcataagc
acatggctgactgctgcaggcttcattcacttggtggaaaactcgggggatccttgggaa
agctttaaaaattcccaagcgctttcctactgggaatgcgtctacctgctaatggttacc
atgtccactgtcggctatggagacgtttatgcaaaaaccacccttggccgcttgttcatg
gtcttctttatccttggtggtttggccatgtttgcaagctacgtccctgaaatcatagag
ttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaagcac
attgtggtttgtggtcacataacactcgagagtgtgtccaacttcctaaaagacttccta
cacaaggacagggatgatgtcaatgtagaaatcgtttttctccataatatttcccctaat
cttgagctggaagccttgttcaagcgccacttcacccaagtagagttttaccagggatcc
gtcctgaacccacacgacctggctcgagtcaagattgaatcagctgatgcctgcctgatt
ttagcaaacaagtactgtgctgaccctgatgctgaagatgcgtccaacatcatgagggta
atatctatcaagaactatcatccaaagatcagaataatcacccagatgttgcagtaccac
aataaggcccacctgttgaacatccccagctggacctggaaggagggagatgacgccatt
tgccttgcagagctgaagcttgggttcatcgcccagagctgcctggctcaggggctctcc
accatgctggccaatcttttctccatgaggtctttcatcaagattgaagaggacacatgg
cagaagtattaccttgaaggagtagccaatgaaatgtacacggagtacctttcaagtgcc
tttgtggggttatccttcccggttatttgcgaactctgctatgtgaagctcaagttgctg
ctgatagctatagagtacaagtctgatcagagggagagcagcacactgatcaaccctggg
aaccatgttaaaatgcaggaaggaacactgggcttttttattgcaagtgatgccaaagaa
gtgaagagggcattgttttactgcaaggcttgccatgatgacataacagaccctaaaaga
ataaagaaatgtggatgcaagaaattgatatattctaaaaatagctataatggatatatc
aagtcaattgaagaggaccaacagtctgcgctgtcccccaaaaagaagcagcgtaatgga
ggcacgagaaattcgcccaactcttcgcccaagataatgaggcatgatccactcctcatc
ccaggcagcgagcaaattgagaccatggacgagaacataaaaaagtatgactccactgga
atgtttcactggtgcccgtccaaggacattgagaaggttcttctgacccgaagtgaggca
gccatgacggtcttgagtggacatgtggtggtgtgcattttcggagatgtaaagtcagct
ctgattggtctccggaactttgtcatgcctctaagagccagcaactttcactaccatgag
ctgaagcacatcgtgtttgttggttccctcgagtatctgaagcgggagtgggaaactcta
cataatttcccaaaagtgtccattctgcctggcacaccgttgagcagagcagatctaagg
gccgtcaacataaacctgtgcgacatgtgtgtcatcctgtcagccaatcagaacaatatt
gacgatgcatcactgcaggacaaagagtgcattttggcgtcgcttaacatcaaatccatg
cagtttgacgacagcatcggggtcttgcaggccaactctcaaggcttcacaccaccaggg
atggatagatcctctcctgaaaacagcccagtccatggattagtccgacagacctctgtc
accactggggcaaacattcccatcataaccgaactagcaccattagcaaagcaaggcaaa
aaactgcctgtgatttcactcagtcaggataaaagctgtgggaccagcatacaaatgata
actgagctggttaatgactccaatgttcagttcctggaccaagacgatgacgatgaccca
gatacggagttgtacctcactcagcctttcgcctgcgggacggcatttgcagtcagtgtt
ctggactccttaatgagtgctacatacttcaacgataatatcctcaccttgatccggaca
ttggtaacaggcggtgcgacaccggagcttgaggggctgctggctgaggagaatgcattg
cgtggcggctacagcacgccacagaccctggcgaacagggacaggtgtcgcgtggcacag
ctggccctgtacgacgggccctttgccgacctcggggatggtggctgttatggtgacctg
ttttgtaaagccctgaaaacgtataacatgctgtgttttggcatctatcggttgcgagat
gcacatctaaacacacaaagccagtgtaccaaacggtacgtcataaccaatcccccgtat
gcatttgagctggtgccctctgacctgatattctgcctgatgcagttcgaccacaacgct
ggccattctcgaaccagcctgtgtcactcatctcattcttcacattcttcgagcaaaaag
agctcgtccgtccactctatcccaactgcaaaccgcaccaatcgcaccaaaagcagggac
ttacgagacaaacaaaatgcaacaatgatcaacagagtggggcaagaaaagacatggttt
acagatgagccagcgaaaacccacctgaggaccatgcagctcagacctgtgaatactctc
accgtcaaccagatcagtcagaataaacccacaagcagcttgattcaacccatcagagaa
gcggaggacgagtgctga
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