Nothobranchius furzeri (turquoise killifish): 107387854
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Entry
107387854 CDS
T05163
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04137
Mitophagy - animal
nfu04144
Endocytosis
nfu04145
Phagosome
nfu04148
Efferocytosis
nfu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107387854 (rab5c)
04145 Phagosome
107387854 (rab5c)
04137 Mitophagy - animal
107387854 (rab5c)
04148 Efferocytosis
107387854 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107387854 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107387854 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107387854 (rab5c)
04031 GTP-binding proteins [BR:
nfu04031
]
107387854 (rab5c)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
107387854 (rab5c)
Endosome - Lysosome transport
107387854 (rab5c)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107387854 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
107387854 (rab5c)
Exosomal proteins of colorectal cancer cells
107387854 (rab5c)
Exosomal proteins of bladder cancer cells
107387854 (rab5c)
GTP-binding proteins [BR:
nfu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
107387854 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
RsgA_GTPase
AAA_16
MCR_beta
AAA_22
Motif
Other DBs
NCBI-GeneID:
107387854
NCBI-ProteinID:
XP_015818566
UniProt:
A0A8C6Q6B7
LinkDB
All DBs
Position
sgr12:25965568..25971340
Genome browser
AA seq
217 aa
AA seq
DB search
MAGHSGGSNRPNSTAGPNKICQFKLVLLGESAVGKSSLVLRFVKGQVHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNKDTFERAQNWVKEL
QRQANPDIVIALAGNKADISDKRAVEHQEAQAYADNSSLLFMETSAKTAVNVNEVFIAVA
KKLPKSDPQGRSGQAARTGVDLNNSAPQSHGSRCCSN
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcacagcggcggatcaaacaggcctaacagcactgcagggccaaacaaaatc
tgccagttcaagctggtgcttctgggggagtcggcggtgggcaaatccagtttggtgctg
cggttcgtcaaaggacaggttcatgaattccaggagagcacaattggcgctgctttcctc
acacaaacggtgtgtctggatgacacaactgtgaagtttgagatttgggatacagctggt
caggagcgctaccacagcctggcgccaatgtactacagaggtgctcaggcagctatcgtg
gtctatgacatcaccaacaaagacacttttgagcgtgctcaaaactgggtgaaggagctt
caaaggcaagccaatccagacatagtgatcgctctggcaggcaacaaggcagacatctca
gacaagagagctgtggagcatcaggaggcacaggcgtatgctgacaacagcagcttgctc
tttatggagacttcagccaaaactgctgtgaatgtgaatgaagtttttatagctgttgca
aagaagctaccaaagagcgaccctcagggcagatccggtcaagctgcaaggacaggagtg
gatctaaacaactcggccccccagagccacggcagcaggtgctgttctaattaa
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