Nothobranchius furzeri (turquoise killifish): 107387974
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Entry
107387974 CDS
T05163
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04145
Phagosome
nfu04514
Cell adhesion molecules
nfu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107387974
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107387974
09142 Cell motility
04810 Regulation of actin cytoskeleton
107387974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107387974
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107387974
04515 Cell adhesion molecules [BR:
nfu04515
]
107387974
04090 CD molecules [BR:
nfu04090
]
107387974
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107387974
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
107387974
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107387974
Cell adhesion molecules [BR:
nfu04515
]
Integrins
Integrin alpha subunits
107387974
CD molecules [BR:
nfu04090
]
Proteins
107387974
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
107387974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Copine
CPL1-like
Motif
Other DBs
NCBI-GeneID:
107387974
NCBI-ProteinID:
XP_015818764
UniProt:
A0A9D2XMX8
LinkDB
All DBs
Position
sgr12:30909912..30935374
Genome browser
AA seq
1135 aa
AA seq
DB search
MDRTINVILFWSVLTAALCFNIDPAAWKSFSDSAGGFGYQVVQRQLSLLISAPLEQHSSN
GRGVVFECTTEKCQELLLSEEKTPVNMSLGLAMASDPMTQNTLACGPTIPKDCKSITMYK
GLCFEIDPQNRFGNSYPPSTEECQNMADIAFLLDASGSVAAEDFIKMKTFVKNLISSFLR
RETEATKFSVTQFSSKTTIHYYFDTFPSGNWKYHIDNLKQIIGATATAAAIKKVVSDVFS
PDRGSRLKVKKILIVITDGQSTDSDLDKAIQLADNKDIARFSVGVGEAFTSLDAIKELKL
IASQPSENFMFQVENFEALEKIQGNLQDRIFSIEGSKVSGETLKLEMSQEGFRTAILPGE
VQMSIVGANEWRGGYRKYSLQNAVLTGSFEPQSIGPDSYLGYSMAVAPTQSGMLTVLGAP
RYKHRGVVITVFRDDFHQQINPYPEQSGEYFGAEVCAVDVNSDSYTDLILLSAPMYKDDD
REGRVYVCKLTGLNVDCHFDSPSQLIILRGDPSPKGRFGSSLAALPDLNRDGFNDLVVGA
PLENDGQGSIYIFNGEGGEGINPTYSQKMAASDVKSGLTFFGLSISPRSHDQSGDTLPDL
AVGSVGTVVLLRSRPLVMVNATVLFSPNEIPTQNPDCSKPLESTAEICFTMRGLSGIDAA
QAQIGYTLILDATRRAPNNRAYITKEKRDITGSVNVDIHGQMCKSEKFFIKPCPEDALNP
IENKLKFTFDGLPSKTNLRPSLSQQVQTKTFHPIRFEISCGVDNECVDELNMDFNFTRSS
EVKVGIDELLNVTVSVDNSGENSYNNHIILTYPVGLSYRKFTSLQGRIECNSLDSEDGVA
RGKTDCSVDKPIFKSNSKAIFIVSYGFNPRRSLDNKKKIFIAANATSGNQQHSASSNLYK
KKEIGVKFSIFITIESSLSYNNFTIGKSNQQKTFQQLIEVTNSIRALTFTVVIRVPVKLR
DKDIWMDMDSLQITDCERSKYEEPIVTDFAAQIKKTKVVDCSVARCRVFRCKRFMEKNEK
RTHKISANLSSGWIEQIGLPSAKLLLTSTASLEYDANQYIFFSAASNYTPPVRKIEAEIE
VFPEPDFTKEIIGGSLGGLLLLLLLTAGLYKAGFFKSKYNELMAEHVGEADPVNA
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcggaccattaatgtgattttattctggtctgtgttaacagctgctctttgcttt
aatattgatcctgctgcttggaagtctttcagtgactctgctgggggttttggctaccag
gtggtgcaacggcaattgagtttgctcatcagtgccccacttgagcagcactcgagtaac
ggaaggggagtagtatttgaatgtaccaccgagaaatgccaagagttacttctgtcagaa
gaaaaaactccagtcaacatgtctcttggtttggcgatggcaagtgatcccatgacccaa
aacactttggcatgtggtccaactattcctaaagactgcaaaagtatcaccatgtacaag
ggtttgtgctttgagatagatcctcagaacagatttggaaactcttatccgccttccacg
gaagagtgtcaaaacatggctgatatcgcgtttcttctggatgcctctggcagtgtggcc
gcagaagattttattaaaatgaagacctttgtgaaaaatctaattagttcattcctgaga
agagagacagaagccacaaagttttccgtcacacagttttcatcaaaaactacaattcat
tattattttgatacatttccgtcaggaaactggaaatatcacattgataatttaaaacaa
attattggagcaacagcaacagctgcagctatcaaaaaagttgtgagtgatgtcttctca
ccagacaggggttccaggctaaaggtgaaaaagattttgatagtcattacagacggacag
tctactgacagcgacctagacaaagcgatacaattagctgacaataaagacattgctcga
ttttctgttggggtgggagaagcatttacaagccttgatgcaataaaagaactcaaactg
attgcatctcaaccgtctgaaaactttatgtttcaagttgaaaactttgaagcgcttgaa
aaaattcaagggaacttgcaagacagaattttttctattgaaggatctaaagtcagtgga
gagacactgaaactggaaatgtctcaagaggggttcagaacagctatcttaccaggggag
gttcagatgtctattgttggtgctaatgagtggagaggaggctacaggaaatactcactt
cagaatgccgtgcttacaggctcatttgaaccacaatctatagggcctgacagttatctt
ggttattccatggcagtagctccaactcagtcaggcatgttgacagttctaggtgctccg
cggtacaaacacagaggagttgtgatcactgttttcagagatgattttcaccagcaaata
aacccttatccagaacagagtggggaatattttggggcagaggtttgtgccgtggatgtg
aattctgacagctacactgatctaatcctcctatctgctcccatgtacaaagacgacgac
agagagggacgagtgtatgtttgcaagctgactggtttgaatgtcgactgccactttgat
tctccatcacaactaataatactaagaggagatccatccccaaaaggaaggtttggatct
tctcttgctgctctgcctgatctaaacagagatggattcaatgatctggtagttggagct
cctctggagaatgatggccaaggtagcatctacatattcaatggagaaggaggtgaaggg
atcaatcctacctactcacagaaaatggctgcctctgatgtgaaatcaggactaacgttt
ttcggtttgtccatcagtccacggtctcatgatcagagtggagacacactgcctgactta
gcagtgggttcagtgggaacagttgttttactcaggtccagacctttggtgatggttaat
gccactgtgttgttcagcccaaatgaaatcccaactcaaaacccagactgttcaaaacca
ttggaaagtacagctgaaatctgctttaccatgagaggattgtctggaatcgatgcagct
caagcacaaattggttacactttaatactggatgcaactcgaagggctccaaacaacaga
gcttacatcactaaggaaaagagagacattacaggatcggttaatgtcgacatacatgga
caaatgtgcaaaagtgaaaaattctttatcaagccctgtccagaagatgctctcaatcca
attgaaaataagctcaaattcacttttgatggtttaccctcgaagacgaatctcagacca
agtctctcccagcaggttcaaacaaaaacctttcatccaattaggtttgaaatcagctgt
ggtgttgacaatgagtgtgtcgatgaactaaacatggatttcaatttcaccagatcctca
gaggttaaagttggcatagatgagcttttaaacgtgaccgtctcagtggacaacagcggg
gaaaactcttacaacaaccacatcattctcacatacccagtgggactctcctacaggaag
tttacatctctacaaggaagaattgagtgtaactccctggatagtgaagatggcgttgca
agaggaaagacagactgcagtgttgacaaacctattttcaaaagtaactctaaggcgatc
ttcatcgtttcctatgggttcaatcccagacgatcacttgacaacaagaaaaagatcttt
attgctgcaaatgctacaagtgggaaccagcagcattctgcatctagcaacctctataag
aagaaggagattggtgtaaagttcagtatctttattaccattgaaagctccctcagctac
aacaatttcacaatcggaaaaagcaatcagcaaaaaacatttcagcaattaatagaggtc
actaatagtatcagagctcttacttttaccgtggtgatccgagttcctgtcaaactcaga
gacaaagacatttggatggacatggacagtttgcagattacagactgtgaaagaagcaaa
tatgaagaacccatcgtcacagattttgctgcacagataaagaaaacaaaagttgtggac
tgctctgtagctaggtgcagagtgttcaggtgcaaaaggttcatggaaaagaacgagaaa
cgaacacataagatctctgcaaacctcagctcagggtggatagaacagattggactccca
tctgccaaattactgctgaccagtacagccagtctagaatacgatgcaaaccagtacatc
ttcttctcagcagcctctaattacacacctcctgttcgtaagattgaggctgagatcgaa
gtgtttcctgaaccagatttcaccaaagagatcatcggaggatctctgggaggcttgttg
cttctgcttctactcaccgctggcctgtataaggctggatttttcaagagcaaatataat
gagctaatggctgaacatgtaggagaagctgatccagtcaatgcatga
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