Nothobranchius furzeri (turquoise killifish): 107387976
Help
Entry
107387976 CDS
T05163
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04145
Phagosome
nfu04514
Cell adhesion molecules
nfu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107387976
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107387976
09142 Cell motility
04810 Regulation of actin cytoskeleton
107387976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107387976
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107387976
04515 Cell adhesion molecules [BR:
nfu04515
]
107387976
04090 CD molecules [BR:
nfu04090
]
107387976
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107387976
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
107387976
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107387976
Cell adhesion molecules [BR:
nfu04515
]
Integrins
Integrin alpha subunits
107387976
CD molecules [BR:
nfu04090
]
Proteins
107387976
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
107387976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
ITGAX-like_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
FG-GAP_2
CPL1-like
Copine
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
107387976
NCBI-ProteinID:
XP_015818765
UniProt:
A0A9D2XMA8
LinkDB
All DBs
Position
sgr12:30885006..30909881
Genome browser
AA seq
1131 aa
AA seq
DB search
MDGIRIVMLLCSVLDAGLCSIDSGAWKSFSDFAAGFGYQVVQRQSGLLISAPFEQYSSNG
RGQIFDCVNECKELHLPKAPVNMSLGLALAIDPTTQNTLACGPSIPKDCKSITMYNGLCF
EIDPQNRFGNTYPSSTEECKNQADIAFLLDGSGSVAAEDFIKMKDVVKKLIRSFLKNDTD
DIQFSITGFSTDVQIYYDLAKLPSETWESHIDKIKQTIGKTATATAIKKVVEDVFSPNKG
SRPNVKKILIIITDGKSTDSGLDEAIELADKKHITRFAVGVGEAFDKEDATKELNLIASS
PPENFMFKVDNFKKLEKIQENLQDRIFSIEGSKASGATLKLELSQEGFRTAIVPEGIQMS
IVGANQWRGGYKKHSLQNPAGSLSYEPEDIEPDSYLGYSMAVATSESGILTILGAPRYKH
RGLVRIVYKVTTKQEIHPYPEQIGEYFGAEVCAVDVNSDSYTDLILISAPMYKDNNREGR
VYVCSFNGRIVNCHFDSPSQLIILRGDPFPKARFGSSLAALPDLNADGFNDLVVGAPLEN
DGQGSIYIFNGEGGEGINPAYSQRIAASEVKSGLKFFGLSISPWSYDQSGDTLPDLAVGS
VGTVVLLRSRPLVMVDTTVTFSPNEIPTQNPNCSKPLESTATICFTMRRLSRVDTAKARF
NYTLTLDATRKTPNNRAYIIKQKQRAQNGSIIVDLNEQKCIGVDFYIESCPEDALNPLKN
ELRYTFDGFPSKTNLTPSISQQAKTATFHPISFQISCGDDNKCVDDLKVDFDFTRSSEVK
VGIDELLNVTVSVDNSGENSYNSHIILTYPVGLSYRKFTSLQGRIECNSLDSEDGVVRGK
TDCSVDKPIFKSNSKAIFIVSYGFNTRTPLNDKRTIFVTANATSDNQQHSSSNVYKKKEI
NLKFSIFITIESSLSYRNFTFGKNDLQKPFEQLIEVTNSIRPLNFTEVIKVPVKLGDKDI
WVDMDSLQITDCDRTEDKEPVVTDFAAQIKKTKAVDCSVARCRVFRCKRFMEKNEKRTHK
ISANLSSGWIEQIGLPSAKLLLTSMASLEYDANQYIFFSTASNYAPPVCKIEAEIEVFPE
PDFTKQIIGGSLGGLLLLILLTIVLYKAGFFKSKYNKKMATNAEEAEPANA
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatccgtattgtgatgcttttgtgctcagtgttagatgcaggactttgttcc
attgattctggggcttggaagtccttcagtgactttgctgcaggttttggctaccaggtg
gttcaacgacaatcaggtttgctcatcagtgccccatttgaacagtattcaagtaatgga
aggggacaaatattcgattgcgtgaatgagtgtaaagaactacatcttccaaaagctcca
gtcaacatgtctcttggtttggcgttggcaattgatcccacaacacagaacactttggca
tgtggtccaagtattcctaaagactgcaaaagtatcactatgtacaatggtttgtgcttt
gagatagacccacagaacagatttggaaacacatatccatcttccactgaagagtgtaaa
aaccaggcagatattgcttttctgctggatggctcgggtagtgtggctgcagaagatttc
ataaaaatgaaggatgttgtgaaaaagttaattcgttcattcctgaaaaatgatacagac
gacatacagttttccatcacagggttttcaacagatgtccaaatttattatgaccttgct
aaacttccttctgaaacctgggaatctcatattgataaaataaagcaaactattggtaaa
acagcaacagctacagccatcaaaaaagttgtggaagatgtcttctcaccaaataaaggt
tccagaccaaatgtgaagaagattttgataatcattacagatggaaaatctactgacagt
ggcttagacgaagcaatagaattagctgacaagaaacacatcactcgatttgcagttggg
gtgggagaagcgtttgataaggaggatgcaactaaagagctcaacctgatagcatccagt
cctccggagaactttatgtttaaagttgataattttaaaaaacttgaaaaaattcaagag
aatttgcaggacaggattttttctatagaagggtctaaagccagtggagccacactgaaa
ctggaattgtctcaagaggggttcagaacagctatcgttcctgagggaattcagatgtct
attgttggtgctaaccaatggagaggaggctacaagaaacactcacttcagaatcctgca
ggcagtttgtcatatgaaccagaagacatagaacctgatagttatcttggttattccatg
gcagtagctacaagtgaatctggcatattgacaattcttggtgctccacgatacaaacac
agaggacttgtgaggattgtttataaagtaacaaccaaacaagaaatccacccctatcca
gaacagattggtgaatattttggggcagaggtttgtgccgtggatgtgaattctgacagc
tacacagatctaatcctcatatctgctcccatgtacaaagacaacaacagagaaggacga
gtttatgtttgctcattcaatggtcggatcgtcaactgccactttgattctccatcacaa
ctaataatactgagaggggatccattcccaaaagcaaggtttgggtctagtcttgctgct
ctgcctgatctaaatgcagatggattcaatgatctggtagttggagctcctctggagaat
gatggccaaggtagcatctacatattcaatggagaaggaggtgaagggatcaatcctgct
tactcacaaagaattgcagcctctgaagtgaaatcaggactaaagttctttggtttgtcg
ataagtccatggtcttatgatcagagtggtgacacactgcctgacttagcggtgggttca
gtgggaaccgtcgtcttgctcagatctagacctttagtgatggtggataccactgtgaca
ttcagcccaaatgaaatcccaactcaaaacccaaactgctcaaaaccattggaaagtaca
gctacaatctgctttaccatgaggagactgtctagagtcgatacagctaaagcacggttc
aattacactttaactctggatgcgactcgtaagactcccaacaaccgagcttacatcatc
aagcagaaacagagagcccaaaatggatctattattgttgacttgaatgaacaaaagtgc
attggtgttgatttctacatcgagtcctgtcccgaagatgctctcaatccgctcaaaaat
gaactcagatacacttttgatggttttccttctaaaacaaatctcacaccaagcatctcc
cagcaggctaaaacagcaacgtttcatcctattagctttcaaatcagctgtggggatgac
aataagtgcgtagatgacctaaaagtggattttgatttcaccagatcctcagaggttaaa
gttggcatagatgagcttttaaacgtgaccgtctcagtggacaacagcggggaaaactct
tacaacagccacatcattctcacatacccagttggactctcctacaggaagttcacatct
ctacaaggaagaattgagtgtaactccttggacagtgaagatggcgtcgtaagaggaaag
acagactgcagtgttgacaaacctattttcaaaagcaactctaaggcgatcttcatcgtt
tcttatgggttcaataccagaacaccactcaatgacaagagaacaatctttgtcactgca
aatgctacaagtgataatcagcagcattcttcaagcaacgtctataagaagaaggagatt
aatctgaagttcagcattttcataacaattgaaagctctctcagctataggaacttcacg
tttggaaaaaatgatctgcaaaaaccgttcgaacaactaatagaggtcactaatagtatc
aggcctctgaatttcaccgaggtaataaaagttcccgtaaaactcggagacaaagacatt
tgggtggacatggacagcttgcagattacagactgtgatagaaccgaagacaaagaaccc
gtcgtcacagattttgctgcacagataaagaaaacaaaagctgtggactgctctgtagcc
aggtgcagagtgttcaggtgcaaaaggttcatggaaaagaatgagaaacgaacacataag
atctctgcaaacctcagctcagggtggatagagcagattggactcccatctgccaaactg
ctcttgaccagtatggccagtctagaatacgatgcaaaccagtacatcttcttctcaaca
gcctctaactatgctcctcctgtttgcaagattgaggctgagattgaagtgtttcctgaa
ccagatttcaccaaacagatcatcggaggatctctgggaggcttgttgcttctcattctg
ctcaccattgtcctgtataaggctggatttttcaagagcaaatacaacaaaaaaatggcc
acaaatgcagaagaggctgaaccagcgaatgcctga
DBGET
integrated database retrieval system
