Nothobranchius furzeri (turquoise killifish): 107388211
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Entry
107388211 CDS
T05163
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nfu03036
]
107388211 (mms19)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107388211 (mms19)
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107388211 (mms19)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
107388211 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_2
TOR1L1_N
HEAT_ECM29
HEAT_EZ
API5
PP4R3
Motif
Other DBs
NCBI-GeneID:
107388211
NCBI-ProteinID:
XP_015819117
UniProt:
A0A9D2XMG2
LinkDB
All DBs
Position
sgr12:38188641..38212804
Genome browser
AA seq
1025 aa
AA seq
DB search
MAEESPLLLSLVEEFVSGQQDSKAKEAAKGVKDGQFTMLQLVEALGGSLTSSQPHTRARG
VQLLSDVLQENYADLTEREVEVLIAFYENRLKDHHVVTPPVLRGLQALTKCTALPPGSAV
SMLRSVFQDVHVQSLMLTERGCVYNMLINLMETREAELKGLGADFVFGFVQSMDGERDPR
NLLLAFQIANNIILGGYSLGKFTEELFEVTSCYFPIDFTPPPNDPHGITKEELILALRTV
LTGTPSFAEFLLPLIIEKMDSDIQSAKLDSLQTLAACGSKYDHRDLAEFLQGLWTSLRRE
VFQTSSEKIESAALTALTALTSCLSRSVVNSDSEDTLITLLDLVLTDCKHHLCEPDLKLV
WPSAKLLQAACSASNRASHIITAAVMPSLIEQYNSRTQCSHRRTLLEVVQRFIKSVKTNT
SSDTDESVLSAYRAALCSMVFSALSESNSSLQITATTVLTSLIQHKGLLLDSDVGLAVDH
LTRLLLTEEDESVSSAVVECAGALAELHPAALITKLIPKLKEEMFSDPRENSEMNSHHAM
RQRCLSALAAVSLQPSVVFESTPVLLQVLSSAHTDGARFSVDEVVLACRSLQRIAEQVQD
TEETGRCFHDNIIPRLLSLALQAALQNEGSSGHRSPLTEEVFLSALVPVISTSCSRLQPK
LAGQTAARAVSLFLDGDVSFLPDNSFPSHIQLLTKQQEESWSRSQLVCLLMACVCSLPRS
VEVPQMERLLFQLEELSCSCSHLLSYTSAAKCFAGLINKRPLGNSLDDLIQTTMKRVCSE
LGCTSSPVRIQAFTLMTWVAKALLLRYHPLFSLLTDKLFSLLDDPDLGPMAADSFSLLMS
DSADVLNRGCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKSNYLKALSNIVNELPKQV
QVSELPALLSLILEALTCPDQSVQLSTLSCLEPVLMNPPQVLIQQLEALVSRLLALLCSP
AMKIRIASVRCIHALSQFPVHEVLPFRARVLRALAQALDDKKRLVRREAVHARGAWFLLG
SPGGR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagagagtcctttgctactttctctggtggaggaatttgtctccggacaacaa
gacagcaaggcaaaggaggcagcgaagggggtcaaagatggacagttcaccatgctgcag
cttgtggaagcgcttggtggaagcctgacgagttctcagcctcacactcgcgcgcgagga
gtccagctactctcagacgttttacaggagaactatgcagatctcacagagagagaagtg
gaggtgctgattgccttctatgaaaaccgtctgaaggaccatcacgtcgtcacgccgcct
gttttacggggacttcaggcattgacaaaatgcacagcactgcctcctggctctgccgtc
tcgatgctcaggtctgtgtttcaggacgttcatgttcagtcgttgatgctcacagagaga
ggctgcgtctacaacatgctcatcaacctcatggagacgagagaagcagagctgaaaggt
ttgggagccgactttgtttttggatttgtccagtcaatggacggagagagggatccccgc
aacctcctgttagccttccagatagccaacaacatcattctgggaggatacagtctaggt
aaattcacagaggagctgttcgaagtgacgtcctgctacttccccatagacttcacccct
ccccccaacgacccccatggcatcaccaaagaggagctaattctggctctgaggaccgtc
ctcacagggactcccagctttgcagagtttctgttgccactcatcattgagaagatggac
tcggacattcagagtgcaaagctggattcactgcagactcttgctgcttgcgggtcaaaa
tatgatcacagagacttggctgaattcctccagggactgtggacgtcactgcgcagagag
gtgtttcagacatccagtgagaagatcgagtcagcagccctcaccgctctcaccgcactc
acttcctgtctgtctcgctcagtggtgaactctgattctgaagacaccctcatcaccctc
ctggatctggttctaacagactgtaaacatcatctgtgcgagcccgacctgaagctggta
tggcccagtgccaagctgctacaggctgcctgcagcgcctccaacagggcgagccacatc
ataacagctgctgtcatgccctctctcatcgagcagtacaacagcagaacacagtgttct
catagacgtacgttgttggaagtggtgcaacgattcatcaagtcagtgaaaacaaacacg
tcttcagataccgatgagagtgtgctgtcagcgtacagagctgctctttgcagcatggtg
ttttctgctctctccgagagtaattccagtctgcagatcactgctaccaccgttctcacc
tcactgatacaacataaaggcctgctgttagactcagatgttggtctggctgtagatcac
ctgaccagactgttgctgaccgaggaggacgagagtgtcagttctgctgttgttgagtgt
gctggagctttagcagagctgcatcctgcagccctcatcactaaactgatcccaaagctg
aaggaggagatgttttctgatcccagagaaaattcagagatgaattcccatcatgcaatg
cgccaacgttgtttgtctgctctggctgccgtgtccctccaacccagtgtggtctttgag
agtacacctgtcctcctgcaggtcctcagttcagcacacacagatggggctcgtttctct
gtggacgaggtggttctggcgtgccgcagccttcagaggatagccgagcaggttcaggac
actgaggagacggggcgatgtttccatgataacatcatcccacgcctactgtctttagct
ctccaggctgcgctgcagaatgaggggtcgtctggtcatcgaagtcccctgaccgaggag
gtgtttctgtctgcgctggttcctgtcatcagcacttcctgctcccggctgcagcccaag
ttggcaggacagacggcggcgagggcggtgtctctcttcctggatggcgacgtctccttt
ctgcctgataattccttcccctcacacattcagcttctcacgaagcagcaggaagagtca
tggagtcggtctcagctggtttgtctgctcatggcatgtgtgtgttccttacctcgcagt
gtggaggtgccccaaatggagaggttgctgttccagctggaggagctgagctgcagctgc
agccacctgctgtcctacacatctgctgccaagtgcttcgcaggcctgatcaacaagagg
cctctgggtaactccctagacgacctgattcagacaacaatgaaacgagtgtgtagtgag
ttgggctgcacctcctctcctgtgcgcattcaggccttcaccctcatgacctgggtggcg
aaggctcttctcctgcggtaccaccctctcttctcactattaactgacaagctcttctcc
ctgctggacgaccctgatctgggtccgatggcagcagacagcttctccctgctgatgagc
gactccgctgatgttctgaaccgcggctgccatgctgacgtacgcatcatgtaccgccaa
cgcttcttcagtgagaactcagccaaactggtccagggcttcaacgcagcaccgcaagag
aagaagtccaactacttaaaggctttgtccaacattgtgaatgagctgccgaagcaggtc
caggtgtctgagctgccagcgctactttctttgatcctagaagctttgacgtgtcctgat
cagagcgtccagctgtccactctgtcctgcctggagcccgtccttatgaaccccccacag
gtcctcatacagcagctggaggctttggtcagcaggctgctggctcttctctgtagtcca
gctatgaaaatacggattgcctcagtacgatgcatccacgcgctctcccagtttcctgtg
cacgaggtgttgccgtttcgagcgcgggtgctgcgagcgttggctcaggctttggatgac
aaaaagaggctggtgaggagggaagcggttcatgccagaggagcgtggttcctcctggga
agccctggggggaggtga
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