Nothobranchius furzeri (turquoise killifish): 107388212
Help
Entry
107388212 CDS
T05163
Symbol
csgr12h16orf62
Name
(RefSeq) UPF0505 protein C16orf62 homolog isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107388212 (csgr12h16orf62)
Membrane trafficking [BR:
nfu04131
]
Protein recycling
Others
Retriever complex
107388212 (csgr12h16orf62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5667
Motif
Other DBs
NCBI-GeneID:
107388212
NCBI-ProteinID:
XP_015819120
UniProt:
A0A1A7ZNR3
LinkDB
All DBs
Position
sgr12:38230252..38248595
Genome browser
AA seq
968 aa
AA seq
DB search
MAAVQWYSRGRNYDAELQMCRPEAMPVEFGDYHPLKPIMVTDTKTSRGTRKGSTSSSSSS
SSSAPPDPLSSMLDGTDPLSLFAAASATETSTMSHSSFTGDHGRKRKEKQEETMGPDFEP
WSSKRGEILARFTTTEKLSINLFMGSDKGKAPNPGSSAVSEKVRNRLEELDDLEEGSQRE
LLNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLIT
DILDTFGRLVFDRIWTMCSDPRPLPDSFTVEDVNDTAKETCLNWFFKIASIRELLPRLYV
ETAILKCNRFLNKLGIQETLPRLTSTIRGIGDPLVAAYARAYLCRVGMEVAPHLKECLNQ
NIFDLLATFRQISGESIQKQLVVQRVEAPEYLTLYSPAINWILQCIAYRAPESLLTEMME
RCKTLANNALLLNSVMRAFRPEFVAARATDFIGMIKDCDESGFPKHLLFGSLGRSLACAD
PPESERLTILNEAWKVITKVRSPQDYISCAEIWVEFTCRHFSKREVNTVLADIIKHLTPD
RAFEDAYPQLLLVIRKILTYFHDFSVLFSMERFLPFLDMFQKDSVRVEVCKSIMEVFIKH
QVEVTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLSLLIIGFIRMVSFGRDFEQQLSF
CVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGNHSRKTAAFVRACAAYSFITIPSLS
SIFSRLNLYLLSGQVALANQCLSQADAFLKTAVGVLPEVPRSISVEGKFRSSESFLLDFI
NNFLATLLVVPDHPEHGVLYLVRGLLNMVQDYTWEDNSDGKVRVYVSALPLLAAMSQETY
LYSIPKMDSNETLYGGDPKFLSEINKLCETLIGQILDHLKALARDEQNARRQSTLAFSLF
GVLLAHGDLRNIKLNQLAINLWNLSHKHGHCETRVSVRTLESMKLQARQPDLAHLSDTVQ
RLTLQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtgcagtggtattcccgtggtcgtaactatgatgcagagctgcagatgtgt
cgccctgaggcgatgccggttgaattcggagactatcacccccttaagcccatcatggtc
acagacacaaaaaccagccgtggaacccgcaaaggcagcacgtcatcctcttcgtcatcc
tcctcatcagcccctccggatcccctcagctccatgctggatgggaccgatcccctgtcc
ttgttcgctgcagcttcggctacagagacttcaaccatgtcacacagcagcttcacaggg
gaccatgggaggaagagaaaagagaagcaagaggagaccatgggaccagattttgaaccc
tggtcatcaaagagaggagaaatcttggccaggttcaccacaactgaaaaactctccata
aatcttttcatgggttctgataaaggaaaagctccaaatccaggatcatcagctgtttct
gagaaagtgcgcaatcggctggaggagctggatgacctggaggagggctcccagagagag
ctgctgaacctctcccagcaggactacgccaaccggatcgaggagctgaaccagtccctg
aaggaggcctgggcctctgatcagaaagtcaaagccctgaagatcgttatccagtgctcc
aagcttctgtcagacaccgccgtgatccagttctaccccagcaagttcgtcctcatcact
gacatcctcgacacctttggtcgccttgtgtttgacagaatctggaccatgtgctcagat
ccaagacctcttccagactcctttacggtggaagacgtgaacgacacggccaaggagaca
tgcctcaactggttcttcaagatcgcctccatcagagagctgctgcccagactatatgtt
gaaactgctatccttaagtgcaaccgtttcctcaacaaactaggcattcaggagacactc
cctcggctgacatctacgatcagagggataggagatccactcgtagctgcttatgccaga
gcgtatctctgtagggtgggcatggaggtggccccccatctgaaagagtgcttgaaccaa
aacatattcgacctgctcgccaccttccgacagatcagtggagaaagtatccagaagcag
ctggtggtgcagagggtggaggcgccagagtacctgactctctactcgcccgccatcaac
tggatcctgcagtgcatcgcctacagagctccagagtcacttctcacagagatgatggag
aggtgcaaaacgctggctaataacgctttgctcctgaactcagtcatgagggcgttcagg
ccagagtttgttgcagccagagcaaccgacttcatcggcatgatcaaagactgtgatgag
tccggattcccaaagcaccttctgtttggatctctgggtcgcagtctggcctgtgcagac
cctcccgagtccgagaggctgaccatcctgaacgaagcatggaaggtcatcactaaagtc
cgcagccctcaggattacatcagctgtgcagagatctgggtggagttcacctgccgacac
ttttctaaacgtgaggtgaacactgttctggctgacatcatcaaacacttgactccagac
cgggcgttcgaggacgcctacccccagctgctgctagtcatcaggaagatcctcacctac
ttccatgacttctcagtcctcttctctatggagcgcttcctgcctttcctggacatgttc
cagaaggacagcgtcagagtggaggtctgcaaatccatcatggaggtcttcatcaaacat
caggtggaggtcaccagagatcctgtcatcctcaacgccatgctgcacatctgcaaaacc
atgcacgactctgtcaacgctctgactcttgaggatgagaagcgatctttgtccctgctg
atcatcggcttcatccgcatggtttccttcggtcgggactttgagcagcagctgagcttc
tgtgtggaggccagagccacgttctgtaacctggaacctgttctggtgcagctcatccat
acggtgaaccagctggccatggagaccaggagagtgatgagagggaatcactctcgtaag
accgctgcctttgtcagagcgtgtgctgcctatagcttcatcaccatcccgtctctcagc
agcatcttcagtcgtcttaacctctatctgctgtcgggtcaggttgcgttggccaatcag
tgtctctctcaggctgatgctttcctgaagacagcagttggtgttctcccagaggttcct
cgttccatcagcgttgaagggaagtttcgctcttctgagagcttcctgctagatttcatc
aacaacttcttggccacgctgctagttgtgccggaccatccagagcacggggtgctctac
ttggtccgcggactgctcaacatggtccaggattacacctgggaagacaacagcgacggg
aaagtgcgggtttatgtcagcgctctgccactgctggctgccatgagccaggagacttat
ctctattccatccccaaaatggactccaatgagactctgtacggaggcgacccgaagttt
ctgtcagagatcaacaagctgtgtgagactctgatcggacagatcttggaccatctgaag
gccctcgctcgggatgagcagaacgctcgccgtcagagcaccctggccttctccttgttc
ggagtcctgttggctcacggagatctgaggaacatcaagctgaaccagctggccatcaac
ctgtggaacctcagccacaaacatggacactgtgagaccagagtctctgttcggactctg
gagagcatgaaacttcaggctcggcagcccgacttggctcacctctcagacacggtccaa
cggctcacgctgcagtcccgcacctga
DBGET
integrated database retrieval system
