Nothobranchius furzeri (turquoise killifish): 107388238
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Entry
107388238 CDS
T05163
Name
(RefSeq) probable endonuclease 4
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107388238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107388238
Enzymes [BR:
nfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107388238
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107388238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF1359
Motif
Other DBs
NCBI-GeneID:
107388238
NCBI-ProteinID:
XP_015819165
UniProt:
A0A1A7ZKS4
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All DBs
Position
sgr12:complement(38972296..38979112)
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AA seq
324 aa
AA seq
DB search
MGPRKRKNEDALEDEKEVDNITKKEEAVEEERGGRKRSRGNKYIGAHVGIQGGIWKAVES
CVEMGGYSFALFLGSQRSWKRPALDQKAAEKFQEQRCQHGFDPAHILPHGSYLMNCGSPK
DDVFEKSQALLVDELNRCSLLGLSLYNFHPGSSLGTITTEQCVEKIAGAINHAHQQTPSV
VTVLENMSGQGSTVGGKFSELKSIIHKVRDQTRVGVCLDTCHAFAAGYDLAAEGGVTAML
DEFDQEVGLHYLRAIHLNDSKGKLGCHLDRHEDIGKGNIGISAFRDIVNEPRLDNIPLIL
ETPGRPGFEYPEQIELLYSLCETK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgaggaaaaggaagaacgaggatgctttggaggatgaaaaagaagttgataac
atcaccaagaaggaggaagccgtggaggaggagagaggggggagaaaaaggagtcgtggg
aataaatacattggtgctcatgttggaatccaaggtgggatctggaaagcagtggagtcc
tgtgtagagatgggtgggtacagttttgccctgttcctgggctctcagcggtcctggaag
aggcctgcactggaccagaaagctgcagaaaagtttcaggagcaacgttgtcagcatggg
tttgatcctgcgcacatcctgcctcatgggtcctacctgatgaactgcggatctcctaaa
gatgatgtctttgaaaagagccaggccttgctggtggacgagctcaaccgctgcagcctc
ctgggcctcagtctctacaacttccatcctggatcctctttgggcaccatcaccactgag
cagtgtgttgagaaaatagctggagctataaaccatgctcaccagcagacaccttctgta
gtcacagtgttggagaacatgagtggccagggcagcacggtgggagggaagttctctgag
ctgaagagcatcatccacaaagtgcgagaccagactagagtgggagtgtgtctggatacc
tgccacgcctttgcagcagggtacgacctggctgcagagggaggagtgacagccatgctg
gatgagtttgatcaggaagtcggacttcactatctcagagcaatccacctgaacgattcc
aaaggtaagcttggctgtcacctagatcggcatgaagatattggtaagggcaacattgga
atctctgcatttcgagacattgtcaatgaacccagactggacaacatccctctgatcctg
gagacccctggacggccgggatttgaatatccggagcaaatagagctcctgtattccctc
tgtgagaccaagtaa
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