Nothobranchius furzeri (turquoise killifish): 107388303
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Entry
107388303 CDS
T05163
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04810
Regulation of actin cytoskeleton
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107388303 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107388303 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107388303 (itgb4)
04810 Regulation of actin cytoskeleton
107388303 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107388303 (itgb4)
04515 Cell adhesion molecules [BR:
nfu04515
]
107388303 (itgb4)
04090 CD molecules [BR:
nfu04090
]
107388303 (itgb4)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107388303 (itgb4)
Exosomal proteins of bladder cancer cells
107388303 (itgb4)
Cell adhesion molecules [BR:
nfu04515
]
Integrins
Integrin beta subunits
107388303 (itgb4)
CD molecules [BR:
nfu04090
]
Proteins
107388303 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
EGF_2
I-EGF_1
I-set
Motif
Other DBs
NCBI-GeneID:
107388303
NCBI-ProteinID:
XP_015819247
UniProt:
A0A8C6Q339
LinkDB
All DBs
Position
sgr12:45972490..46018197
Genome browser
AA seq
1992 aa
AA seq
DB search
MERWKLHPSLGLLAILLTCCYAEVNYCFASRAKSCSDCLQAGVGCAYCAEETFNGPRCDE
LDRILAHGCSKASVITAESSLNVKMNKTIDTRIQQSQVSPQQVSMTFLPGEEKLMDVEVF
APTKGPLDLYILMDFSNSMSDDLDNLKKMGNDLASLVRNMSDDYTIGFGKFVDKVIEPQT
DMRPVKLLQPWPNSDPPFSFQNVIKLTGDSTHFISELQKERISGNLDAPEGGFDAILQAA
VCEEKIGWRKYSTHLLVFSTESAFHYEADGVNVLSGILPRNDEQCHLNAQDQYTEDTKQD
YPSIPTLIRLLGKHNIIPIFAVTEHSYTYYNKLKDYFPIAEVGLLEEDSSNILQVMKTAF
ESIRSKMSIRAENRPKAFESTFFTTDGRTAEYGAFNFKPGEIGKFRMRLKAQQAIDGELV
CKMNPEDKEGTIRVKPTTFSSAVNVEASVLCPTCDCEKTRLRNAERCNGNGDLVCGRCQC
HGGWLGNFCNCSASTSALDKNQCTTPDIKEPCSGRGDCLACGTCVCYNPDQFEGPYCQFD
KNQCQRYGGFLCNDRGKCIMGQCSCQKGWEGSACECPTSNQTCLDTKGNLCGGRGACVCG
RCQCPDSGIEMSANCEPNFQFQFGVCEFTRSCVQCQAWKTGEKKDKEECDKCPFKVIMVD
ELEEEKQDLESCSFRDEDDDCTYYYTTQPKTKELEVQVLKKKDCPGAGLLWLLPFLLFLL
LLLALLLLCCWKLCPCCKSCWQGCLALLPCCRRGRMVGFKEDEYVMRQSLLTSDHLDTPM
VRTGPPKGTDVVRWKVTDNVHRGPNHPQALIEPNPKEMIQFPISLRLNRLFSENLSRPES
RDAEQLHMEVADNLNEVYKQIPGAHKIQQTSFRLQKNAGKRQDYTIMDTVLSAPRNAYPD
IVKLTERNVQSGNFRDLKVVPGYYTVASDREAAGAVEFQEGVESVDVHVPLFVKDEDDDK
KQLQVEARDVPLGIAEIGKRFVNITIIKEHATSVFSFLQPNYTYSRQDRVANIPISREII
EDGLTQVTYRTKDLTAKDKKDYVGKEGDLSYSPGETQKVVPVPLLELSERDGLLEDKKIK
QFVMDLSNPRQGAKLGRYPRTTVTIADQPEPSVMMFKKGMQNFSTLDPAYTIPVVRTRNQ
DAPASVKWRTKKAQRFELSGPLMFGPGETEKNIVIDPKAHPGPVKPETFQLELFDPSTNA
LVGERKTTNVNVTEGVLRSPDVDQLQQKAFTNPKATSPGGRLLSPANLKARATGPRNIHL
NWDPPPGNPAGYKVKYWIYGDPEKDAQVLDVKTPQAELTNLYPYCDYETRVCAYNAMGDG
ENTEVVSCQTLEDVPGEPGRLAFNVISPTVTQLSWAEPAETNGNITAYEVIYTPIDDDLK
PVGAEKKVKIDNPKKRMLLIENLQSAQTYQYKVRARNSVGWGPFRDATINLASQPVRPLS
IPIIPDVPIVDAEAGDEYDSYLMYSSDVLKSPTSSKTPSISGEGWHHVKLVGSNLELRQV
TWKKRVDVIPSRLSTDTEASSDEGPHPSYTKTPLPDYMTNGKWEQNFLFPGGSTTRNLSA
SSSPMSTLSSNYRGGGGSFTTETHTTYMSGSGGPRRQDMIGGGVHMSEVIMRKRSENRGY
TDENIRDSIVMGDVTSQFPDLTPSGGFSYSGVQSSSQSQFSYGLSQGSRARTQSSDVNEA
LSSLDRVLRDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKSILGYCVLYQLLSGG
EMKRLNVTNPAENSVIIHDLLPNQSYLFKVKAQSQEGWGPEREGVITIESAVDPKSPLNP
VPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYEVTCEQLHGGGKPRSF
QVSGDNAETSLIVPNLIENIPYKFKVQARTTQGFGPEREGIITIESQDGGALSQYNNQSM
MRREVFHMPTEVTTRTNVSHTMLNDPYFSDGMTMTSQHTETSGMVSRQVTREVVQRTVTG
GSTVTKRMFYES
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atggagagatggaagctgcatccctcactggggcttctagccatcctgctgacctgctgt
tacgctgaagtcaactactgcttcgcgtcccgggccaaatcctgctcagactgtctgcag
gcaggagtgggctgcgcctactgcgctgaagagacatttaatggtcctcgctgtgacgag
ttggacagaatcctcgcccatggctgcagtaaagcatcagtcatcacggctgaaagcagt
ttgaacgtgaagatgaacaaaaccatcgacacgaggattcagcagtctcaggtgtcacct
caacaagtgagcatgacgtttctgcctggtgaggagaaactgatggatgtggaagtgttt
gctccaaccaaaggtcctctggatctttatattctgatggacttctccaactcaatgagt
gatgatctggacaacttaaagaaaatggggaacgacctggcttcgctggtaaggaacatg
tcagacgactacaccattgggtttggaaagtttgtggacaaagtgattgagccccagaca
gacatgagacccgtcaaacttctgcagccgtggcccaacagtgacccccccttctctttc
caaaatgtcatcaaactgacgggtgactcaacacacttcatcagtgagcttcagaaagag
cggatttctggcaacctggacgcccctgaaggaggatttgatgccattttacaggcagca
gtgtgtgaggaaaagatcggatggcgtaaatacagcacgcacctgctggtcttctccacc
gagtcagccttccactacgaagcggacggtgtgaacgtgctttcaggcatcctgccacgc
aacgacgagcagtgccacctgaacgcacaagaccagtacacggaggatacaaaacaagat
tacccttcaataccgacgttgatccgtctgctggggaagcacaacatcatccccatcttc
gccgtcacagagcactcttacacgtactacaacaaactgaaagattatttccccatcgct
gaggtcggtctgctggaggaagactcatccaacatcctgcaggtcatgaagaccgccttt
gagagcatccgctctaagatgagcatccgtgcagaaaacagacccaaggcattcgagtct
accttctttactaccgatggaagaactgcagaatatggagccttcaacttcaagcctgga
gagatcgggaagtttaggatgcggctcaaggcccaacaagctatcgatggagagcttgtc
tgtaaaatgaacccagaggataaagagggcacgatcagagtcaaacccacaacctttagc
tctgccgtcaatgtggaggcatcggttttgtgtccaacctgcgactgtgaaaagactcgc
ctcagaaatgcagaaagatgcaatggcaatggagacttggtgtgtgggaggtgtcagtgc
cacggcggctggctggggaatttctgtaactgctcagccagtacctcagctctggacaaa
aaccagtgcaccactcctgacataaaagaaccttgctcgggccgtggagactgtctggca
tgtggaacctgtgtgtgctacaacccagaccagttcgaaggaccctactgtcagttcgac
aagaaccagtgtcagagatatggaggcttcctctgcaatgaccgtggcaaatgcatcatg
ggtcagtgttcgtgtcagaagggctgggagggtagcgcctgcgagtgtcccaccagcaac
cagacctgtctggacaccaaagggaatctgtgtggcggtcgaggggcctgtgtgtgtggc
cgctgccagtgtccagactctggcatcgagatgtcagcaaactgtgagccaaacttccag
ttccagtttggtgtgtgtgagttcaccaggagctgtgtccagtgtcaagcctggaagacg
ggagagaagaaagacaaagaggagtgtgacaagtgtccttttaaagtcatcatggtggat
gagctggaagaagagaagcaggaccttgaatcgtgcagcttccgtgatgaagatgacgac
tgcacctactactacacgactcaacctaaaactaaggagctggaggttcaggtgctcaaa
aagaaagactgtccaggtgctggcctcctgtggttactccctttcctcctgttcctcctc
ctgttgttggcacttctgctgctctgttgctggaaattatgtccctgttgcaaatcctgc
tggcagggttgtcttgccctgctgccttgctgcaggagaggccgcatggttggttttaaa
gaagatgagtatgtgatgcgtcagtctctgctcacctcggatcacttggacacaccaatg
gtgaggaccggcccgcccaaagggaccgatgttgttcgctggaaggtgacggataacgtg
caccgtggaccaaaccacccccaggctctgatagagcccaacccaaaggagatgatccag
ttccccatctccctccgactgaacaggttgttctcggagaacttgtctcgtccagaatca
agagatgccgagcagctccacatggaagtggctgataatctcaatgaggtgtacaaacaa
attcctggagcacataagattcaacagacctcattcaggttgcagaagaatgcagggaaa
aggcaggactacaccatcatggacacggtcctgtccgctccccggaacgcctacccggac
atagtcaagctcaccgagagaaacgttcagtctggaaacttccgggacctcaaagtggtg
ccaggctactacactgtagcgtcagacagggaggctgcgggagctgtagagttccaggag
ggtgtggagtccgtagatgttcacgttccactttttgtcaaagatgaagatgatgacaag
aagcagctgcaggtggaggccagggatgtgccgctgggcatcgcagagatcggaaaacgc
tttgttaacatcaccatcatcaaagaacacgccaccagcgtgttctcattcctccagcca
aattatacctacagcagacaggacagggtcgcaaacatcccaatcagcagggagattata
gaggatgggctcacacaggtcacctaccgtaccaaagacctcactgccaaagacaagaag
gactacgtaggcaaagaaggagacttgtcctacagtcctggtgagactcagaaggtggtt
cctgttcctctgctggagctgagtgagagagacggcctgttagaggacaaaaagatcaag
cagtttgtcatggaccttagtaacccacgacagggcgccaagctgggccgctacccgaga
accaccgtcaccatcgcagaccaaccagaaccaagtgtgatgatgttcaagaaaggtatg
cagaacttcagcactttggatccagcctataccattccggtggtccgcactcgtaaccaa
gacgctccagcctcagttaaatggcgcaccaagaaggcccaacgctttgagctttctggc
ccactgatgtttggtcctggagaaacagagaagaacatagtgatcgaccccaaagctcac
ccaggcccagttaagccagagaccttccagctggagctgtttgaccccagcaccaatgct
ttggttggagaaaggaagacgaccaatgtcaatgtcacagagggagttctaagatctcct
gatgtagatcagctgcagcagaaagctttcacaaatccaaaagccacgtcccccggtggt
cgccttctctccccagcaaacctcaaggcaagagcaactggacccagaaacatccacctg
aactgggatccacctcccggtaaccctgcaggatacaaggtgaagtactggatctacggt
gacccagagaaagatgcccaggtcttagacgtgaagactcctcaagccgagctgacgaac
ctgtatccctactgtgattatgagacaagggtgtgtgcctacaacgcaatgggagatggc
gaaaatacggaagttgtttcctgtcaaactctggaggacgttcctggtgagcctggtcgt
ctggcctttaacgtgatcagcccgactgtcacgcagctcagctgggcagagcctgcagag
accaacggcaacatcacagcatatgaggtcatctacacgcccatcgatgatgacctgaaa
ccggtgggagcagagaagaaagtgaagatcgacaacccaaagaaacggatgctgttgata
gaaaatctccaaagtgcacagacttatcagtacaaagtccgagcaagaaacagtgtgggc
tggggtcctttcagagacgcaaccatcaacttggcatcgcagcctgtgagacctctgtcc
attcccatcattccagatgttcctattgtggatgcagaggcaggagatgagtatgacagc
tacctgatgtatagcagtgatgtgctgaagtcacccacaagctccaagacaccgagcatc
tctggggaaggctggcatcatgtcaagttggtggggtccaacctggagctccgtcaggtg
acgtggaaaaagcgagtggacgtcatccccagtcggctcagcacagacacagaggcgagc
tcagatgagggcccccaccccagctacaccaaaacacccttgccagattacatgacaaat
gggaagtgggaacagaacttcctgttccctggagggtcaacgacacgcaacttatcggca
tcatcctctcccatgtccacgctgagctccaactacagaggaggcggcggctccttcacc
acagagacacacaccacctacatgtctggatccggaggtcctcgtagacaggacatgatt
ggaggaggcgtgcacatgtctgaggtcatcatgaggaagcgttcagaaaacagaggttac
acagatgaaaacatccgggactccatcgtcatgggtgatgtgacgagtcagttcccagat
ctcactccatcaggtggcttcagctactctggggtgcagagcagctctcagagccagttc
agctacggcctgtctcagggttccagggccaggacacagtcttcagatgtcaatgaggcc
ttgtccagtctggacagagtgctccgggatgcccgactctctccaggtgtcccagacacc
cccagcagactggtgttctctgctctgggaccaacggctcttaaagtcagctggcaggag
ccccattgtgagaaaagcatcctgggatactgcgtcctctaccagctgctcagtggaggt
gagatgaagcgcctcaacgtgacaaacccagcagagaactctgtgatcatccacgacttg
ctgcccaaccagtcctacctgttcaaggtgaaggctcaaagccaggagggctggggtcca
gagagggagggggtcatcaccatcgagtcggctgtggacccgaagagccccctcaatcct
gtgccaggctctccctttaccttgagcactcccagtgctccaggtcctctggtgttcacc
gccctgagtcccgactcgctgcagctcagctgggagaagccccgtaaacccaacggagac
atcctgggctatgaggtcacctgtgaacagctacatggtggaggtaaaccgcgatccttc
caggtgagcggcgacaacgcagagaccagcctcattgtcccaaacctcatcgagaacatt
ccgtataagttcaaggttcaggctcggaccacacagggcttcggtccagagagggagggc
atcatcacgatcgagtcccaggatggaggcgccttatctcagtacaacaaccagtcgatg
atgaggagggaggttttccacatgccgacagaggtcaccacacgaaccaatgtctcacac
accatgctcaacgacccttacttctcagatgggatgacgatgacgtcacagcacacagag
acgagcggcatggtgagccgtcaggtcaccagagaggtggttcagaggaccgtcacggga
ggatctaccgtcaccaagagaatgttttatgaatcctaa
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