Nothobranchius furzeri (turquoise killifish): 107388351
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Entry
107388351 CDS
T05163
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu02010
ABC transporters
nfu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107388351 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107388351 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfu02000
]
107388351 (cftr)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
107388351 (cftr)
Transporters [BR:
nfu02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
107388351 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
AAA_16
SMC_N
DUF87
AAA_29
RsgA_GTPase
T2SSE
nSTAND3
MMR_HSR1
AAA_23
MeaB
AAA_30
nSTAND1
Motif
Other DBs
NCBI-GeneID:
107388351
NCBI-ProteinID:
XP_015819310
UniProt:
A0A8C6KZW2
LinkDB
All DBs
Position
sgr13:6095847..6184635
Genome browser
AA seq
1502 aa
AA seq
DB search
MQKSPVEDANFLSKFVFWWISPLLRKGFTKKLDLNDVYKAPSFDLADTLSERLEREWDRE
VVSAKRPKLLKALARCFFGPFAFFGILLYLGEASKTVQPQLSGRIIASFDPFHAPERSQG
YYLALGLGLLLTARFILLQPAIFGLQHLGMQVRIALFSLIYKKTLKLSSRVLDKISTGQL
VSLMSAHLNKFDESLGLAHFIWITPLQCILCTGLIWELIEVNGLCALAALTLLGIIQAWL
SMKMAPHRMKRAGMISRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQEEMTLTRKIG
SLRYFYSASYFFSAILVILSAIVPYALTQGIILRRIFTTASYCIVLRMTLTRQLPGSIQM
WYDTLALVKKIEDFLLKEEYSVLDYNLTTVGLELINVSASWDEGIGELFERIKEENKTNG
HQSSDDGLFFTNLYITPVLRNISLCLDKGTMLAVSGSTGSGKSSLLMMILGELAPSEGQI
RHSGRISYSPQTSWIMPGTIRDNILFGLTFDEYRYTSIIKACQLEEDFAVLPEKDKTALG
EGGVTLSGGQRARICLARAVYKDADLYLLDAPFTHLDIATEKEVFEKCVCKLMASKTRVV
VTSKLEHLKRADRILLLHNGDCYFYGTFSELQAQRPDFSSLLLGLEAYDNINAERRSSIL
TETLRRVSVDETAGFRGPEPIRQSFRHAPPQNPVAGDGYPEKRKHSLIINPFAAARKFSF
IGNNQPVNNFQPTIEEGVNEMSDRRFSVVPEDDQVEEVLPRSNLYHHGLQHLNGQRRQSV
LAFITNAQGHERREQMQSSFRKKLSITAQCNLASELDIYARRLSKDSVYDISEEVDEEDM
EECFADERESVFQTTSWSTYLRYISTNRSLIYVLIFIGIVFVIEVAGSVVGIFLITDKIW
RDGANPNSPNYISELPPNASSPPVFLAVIVTPTSAYYIIYIFVAHSDSILALGVLRGLPL
VHTLLTVSKRLHEQMLSAVLRAPMSVLNNMKTGRIMNRFTKDMNIIDDMLPFMLFDLIQL
TLLVVGCIFTVSIMRPYIFIAAIPLAVIFVVIRKYFLRTGQQLKQLEAEARSPIFSHLII
SLKGLWTIRAFGRQTYFETLFHKALNTHTATWFHYLSCLRWFLFRCDVLFVMFFTAAAFI
AVGTNQDKPGEIGIVVALAMLILGTFQWAIITSINVDGLMRSVDRVFKFIDLPSEEVLLG
KSGGRGGSDFIINNPHMYDYWPNRGQLDVQDLTVKYTEAGRTVLNNISFSVEGGQSVGLL
GRTGSGKSTLLSALLRLTATEGEMSIDGVSSSSIPLQMWRKAFGVVPQRVFILTGSFRMN
LDPYGRYSDEELWRVAEEVGLRSVIEQFPDKLDFQLEDGGSVLSNGHKQLMCLARSILSK
ARILLLDEPSAYLDPITLQVLRKILKQSFSSCTVILSEHKMEPLLECQSFLMIENSSIKS
YDSIQKVMTEMSHLKQAMSPADRLRLFPALHRLNSTKRPPPPNTKISSLPEEAEDEVQDT
RL
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagtcaccggtggaagatgcaaacttcctctccaagtttgtcttttggtggatt
tccccactgctgaggaagggcttcactaaaaagttggatctgaacgatgtctacaaggct
ccatcttttgatctggcagacaccctctctgagaggctggaaagagaatgggacagagaa
gtggtgtcagccaagaggcccaaactcctcaaagcactggccagatgcttctttggcccc
ttcgctttcttcgggatccttctttaccttggggaagcatctaagactgttcagcctcag
ctctcaggtcgcatcattgcttcctttgatccattccatgctcctgagaggagtcagggc
tactacttagccctgggccttggcctcctcctaaccgctcgcttcatcttgctgcagcct
gccatctttggactgcaacacttgggcatgcaagtccgcatcgcactgttcagtctaata
tacaagaagaccttgaagctgtcgagtcgagtcttggacaagatcagcaccggtcagctt
gtcagcctgatgtcagcccacctcaacaagtttgatgaaagcctgggtctagcacatttt
atctggatcactcctctgcagtgtatactgtgtaccggtttaatctgggagctgatcgaa
gtgaacggcttatgtgccctggcagctctgaccctgctcggcatcatccaggcctggctc
tcaatgaagatggcacctcaccggatgaaacgagcagggatgatcagccgccgcctggct
ctcacctctgagatcgtggagaatattcactctgtgaaagcgtatggctgggaggaggtg
atggaaactatcattaagaacatcaggcaggaggaaatgactctcaccagaaagattggg
tctctgcggtatttctacagtgcctcatacttcttctccgccatcttggtgatcctctca
gccattgtgccgtatgcacttactcaaggtatcattctgcgtcgcattttcaccacagcg
tcttactgcatcgtcctacgcatgacacttacccgccagctgccaggctccatccagatg
tggtacgacacgttggcgttagtcaagaagattgaggatttcttgctgaaggaagaatac
agtgttctggattacaacctgaccacggtgggactggagctgatcaacgtgtctgcatcc
tgggatgagggcattggtgagctctttgagagaataaaggaggagaataaaacaaacgga
caccagagcagtgatgacgggctcttcttcaccaacttgtacatcacacctgtcctcaga
aacatcagcctgtgtttggacaaaggcacgatgcttgcagtgtctggatctacaggctca
gggaagagttctctgctcatgatgatcctgggagaattggccccatcagaaggtcaaatc
agacacagcggtcggatttcctactcaccacaaacctcttggatcatgccgggtaccatc
cgtgataacatcctgtttgggctcacctttgacgagtaccgctacacctcaataatcaag
gcctgccagctagaagaggactttgctgtactgccagagaaagacaagacggcactgggt
gaaggaggagtgactctcagtggtggtcagagagcaaggatttgcctcgccagagccgtg
tataaagatgcagatctctacctgctcgatgctcctttcacccacctggacattgcaaca
gagaaagaagtctttgaaaaatgtgtctgtaaactcatggcctctaagactcgtgttgtg
gtcaccagcaaattggagcatctcaaacgggcagataggatccttctgttgcacaacgga
gactgctacttttacggcactttctcagaactgcaggcacagcgcccagacttcagctcc
ctcctgcttggactggaagcctacgacaacatcaatgcagagcggcgcagctctattctc
acagaaactctacgcagggtctcagttgacgaaactgctggcttcagaggcccagagcct
attcgccagtcattccgccatgcacctcctcaaaaccctgttgcaggagatggctatcct
gaaaaacgcaagcactctctcatcattaacccttttgctgctgcccgtaaattctccttc
attgggaacaaccagccagtaaataatttccagcccacaattgaagaaggagttaatgaa
atgtctgacagaagattctctgtagtacctgaggacgatcaggtagaagaggttctccca
aggagcaacctctatcaccatgggctacagcatctcaacgggcagaggcgccagtctgtc
ctggccttcatcaccaatgctcagggtcacgagcgcagagaacagatgcagtcctccttc
agaaagaagctgtccatcacggcacagtgcaacctggcatctgagctggacatctacgct
cgacgcctgtctaaagatagtgtttatgatattagtgaggaagtggatgaagaagacatg
gaggaatgttttgcagatgaacgtgagagtgtctttcaaactacctcatggagtacttac
ctacgctacatttctaccaacaggagcttaatctacgttctcattttcatcggaattgtc
tttgtcattgaggttgctggttcagtcgttgggatttttctcatcactgataagatctgg
agagacggggccaacccaaactcacccaactacatcagtgaactgcccccgaatgcctca
tcgcctcctgtttttctggcagtcattgtcacacccaccagtgcttactacatcatctac
atttttgtggcccattcggacagcatactggccttgggggtcctccggggtctccctcta
gtccacactttgctcactgtgtccaaaagacttcatgaacagatgctcagtgccgtgcta
cgagcccccatgtctgtgctcaacaacatgaaaacaggcaggataatgaacagattcacc
aaggacatgaacatcattgatgacatgctacccttcatgctttttgacctcatacagctt
actctgctcgtcgttggatgcatcttcactgtttccatcatgagaccatatatcttcatt
gctgccatcccactggctgtcatctttgttgtcatcaggaagtatttcttacgaactgga
cagcagctcaaacagctggaggctgaagctcgcagcccgatcttctcccacctcatcatc
tccctgaagggtttatggaccatccgggcatttggacgtcagacatactttgaaaccctc
ttccacaaggccctgaacactcacacagccacctggttccactacctgtcctgtctcagg
tggttcctcttccgctgtgatgtcctctttgtgatgttcttcactgctgcagccttcatc
gcagtgggaactaaccaggacaaaccaggagaaataggtatcgttgtggctctggctatg
ctcattctggggaccttccagtgggctatcatcaccagtatcaatgtggatggactaatg
cgttcagtggaccgggtgttcaaattcatcgacctgccatcagaggaggtcctactgggt
aaatctggaggcagaggaggttccgacttcatcatcaacaacccccacatgtacgactac
tggcccaaccgaggtcagctggacgtccaggatctcactgttaaatacaccgaagctggg
cgaaccgtgctcaacaacatctccttctctgtggagggggggcagagcgtgggtctgcta
ggtcgaacaggttcaggaaagagcaccctgctgtcggctcttctgcgcctcacagccact
gaaggagagatgtctatcgacggggtttcctcaagctccattcctctgcagatgtggagg
aaggcctttggagtggtgccacagagagtttttattctgaccggatctttccgtatgaac
ctggacccttatggacgttacagtgatgaggagctgtggagggtagcggaagaggttggg
ctgagatcagtcatcgagcagtttccagacaagctggacttccagctggaggatggaggc
agcgtgctgagcaacggacacaaacagctcatgtgtctggcccgctccatcctcagcaag
gcccgcatcctgctcctagatgagccttctgcctacctcgacccaataactctgcaggtc
ctgaggaagattctgaagcagtcgttctccagctgcaccgtcatcctgtcggagcacaag
atggagccgctgctggagtgtcagtcgttcctgatgattgagaacagctccataaagagc
tacgactccatccagaaagtcatgactgaaatgagtcacctgaaacaggccatgagcccc
gccgacaggctccgcctcttcccagcacttcatcgtctcaactctaccaagaggccgcca
ccccctaacaccaaaatctcttctctgcccgaagaagctgaggatgaagtccaggacacc
cgactctaa
DBGET
integrated database retrieval system
