Nothobranchius furzeri (turquoise killifish): 107388387
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Entry
107388387 CDS
T05163
Symbol
acan
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nfu00535
]
107388387 (acan)
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107388387 (acan)
04091 Lectins [BR:
nfu04091
]
107388387 (acan)
Proteoglycans [BR:
nfu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
107388387 (acan)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
107388387 (acan)
Lectins [BR:
nfu04091
]
C-Type lectins
Lecticans
107388387 (acan)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
UL45
Motif
Other DBs
NCBI-GeneID:
107388387
NCBI-ProteinID:
XP_015819369
UniProt:
A0A8C6M810
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Position
sgr13:complement(8735203..8770294)
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AA seq
1344 aa
AA seq
DB search
MTTLLLLCVCFPIISATISFEDHNDMDGALRVSIPSEVSLRPQLGGKVVVPCYFQDNTIK
DIGAPTTAPLSYRIKWTYVTKERTTTILVALGGKVHVEKDYDDRVTLVNYPMVSTDASME
LTELRSKDSGMYRCEVMHGIEDKYDSVEIQVQGIVFHYRAISSRYTLTFERAKAACIHNS
ATIATPAQLQAAFDDGYHQCDAGWLSDQTVRYPIHVPRERCYGDKEDLPGVRSYGIRDVN
ETYDTYCFAEKMSGRVFYSISLEKFNFYQAKDQCAKLGARLATTGELYIAWKGGMDVCNA
GWLADRSVRYPINIARPQCGGGLIGVRTVYLFPNQTGYPYPDSLYDAICFQASEDEGAVP
ERTTPFPDIKQITPSSEFYPGLTPSPGLEEAKSETEDIFSRLPLPTNITGGDGMSPTSVV
FHYRPITGRYTLTFLEAIQTCERVGGVIASPQQLQAAFEKGLHQCDAGWLRDQTVRYPIV
SPRENCAGNLLNIPGVRSYGLRPADERYDVFCYVDGLKGEVFFTSDYDSFSYEEAVQHCQ
KLNTTLATPGQLYAAWKQGLDKCRPGWLMDHSVRYPITTPKSYCGGGQVGVHIIHAFPNQ
TGFPDEYSRYDAYCFRAESSVVHPEYNTSVNSTSLTEDVINKTTIITDHFALTGKTLVSD
NETEPAVNHTEKEMIQNVTVLTQHVAPKERTPVPSASADVSGSGSAELSASGETSRESSS
SSSSGDVSGSGEGVILKESTDVFSGEQSASKMQEARGERVDSFTSGDLGSASASGSESGS
GSGSSSASGSESGSESASGSESGFGSRSASGSESASASASGSESASGSESGFGSGSASES
ASASGSGSAFIISGSGFGSGSAYISGSGEDPTIIIVNGEMEEVSKTHQNNTEQEFGRGHV
DFSGDFKESSGSGSGEVSTSGDVSGSGNVSGLGDVSGSGSSGLPGILYIDHSGTDLTEQQ
SGEQEVSGYHPVGSGGHSGFSSGVPHGVSSSVSASGDPFHLSGDVIYITDDRTFKVTEVR
EPEQGRGVVEVSGEGSSSGVFHEFSSTLSTSGTEAARETLAATMPYTESISAAAQSEVRA
TDQDGYTGPSDFAVTPELAYNSPPTVPSMLLATPAVVEQPDVDEALHGCPNGWREFRDGC
YIHIDNRDTWSEAEHYCQQLNAHLVSINSQEEQEFVNLSGQDYQWIGLNDKDVQNEFRWT
DGNPLSYVNWRPNQPDNYLNSGEDCVVMIWQEGGQWNDVPCNYHLPYTCKMNPVMCGSPP
NVEHGQPMGSSREHYAVDSIVRYQCDAGYTQRHLPVIRCMENGEWQKPQVECLEANANSQ
RLHKRSLWRRSKGVNSQQEQRKQH
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgacaactctgcttctgctgtgtgtgtgtttccccatcatctcagcaacaatatcattt
gaagaccacaatgacatggatggtgcattacgtgtcagcatcccctcggaggtctctctc
cgtcctcagctaggtggtaaggtggttgtgccatgctacttccaagataacaccatcaag
gacattggtgccccaactaccgcaccactctcctaccgcatcaaatggacctatgtcacc
aaggagaggactacaacaatcctagtggcactgggggggaaagttcatgtagagaaagat
tatgatgacagggtgacattggtcaactacccaatggtttctactgacgctagcatggag
cttacagaactgaggtccaaagattctggcatgtaccgctgcgaggtcatgcatggcatt
gaggacaagtacgactctgtggaaatccaggttcagggcattgtgtttcactaccgggcc
atctccagccgttacaccctgacttttgaaagagctaaagcagcctgcatccacaacagt
gccaccattgccactccggcgcagctccaagctgcctttgatgacggataccaccagtgt
gatgctggatggctgtctgatcagactgtcagatatcccatccatgtgccacgggagcgt
tgctatggagacaaggaagacctccctggagtgagaagttatggcataagagacgttaat
gagacctacgacacatattgctttgctgagaagatgtcaggcagagtcttctactccata
tctctagaaaagtttaacttctaccaagcaaaagatcagtgtgccaaactgggtgccagg
ctggccaccactggtgagctttacattgcctggaagggtggtatggatgtgtgtaatgct
ggttggctggcagacaggagcgttcgctacccgatcaacatcgctaggcctcaatgtgga
ggggggctcatcggagtaagaacagtctacttgttccctaaccagacaggatacccatac
ccagactctctctacgatgccatctgcttccaagcaagtgaggatgaaggtgctgtgcct
gagaggaccacacctttcccagacatcaaacaaatcacaccgtcctcggagttctacccg
ggattgaccccttcacccggacttgaggaggctaaatctgaaacagaggacattttctcc
cgactgcctctccctacaaatataactggtggggatggcatgtctcctacaagtgtggtg
ttccactatcgaccaatcactggccggtacactctgacatttttagaagctattcagact
tgtgaaagagttgggggagtcattgccagcccccagcagctgcaggcagcttttgagaaa
ggccttcaccaatgtgatgctggctggctgcgagaccaaaccgtccggtatcctattgtg
tcacccagggaaaactgtgctggtaacctgctgaacattccaggagtgagatcctatggt
ttgagaccagctgatgaacgttacgatgtgttttgttatgtggatggtctaaaaggtgag
gttttcttcaccagtgattatgacagcttctcctatgaggaggctgtgcagcactgtcag
aaactgaacaccaccctggccacccccggccagctgtatgctgcctggaaacagggactt
gataagtgtcgcccaggctggctgatggaccacagtgtccgctacccaatcacaacccca
aagtcctactgtggaggcgggcaagtcggagtccacatcatacacgcatttcccaatcag
acaggatttcccgatgagtactcacgctacgatgcctactgcttcagagccgagtcttct
gttgttcatcctgaatataacaccagtgtaaattcaacatcactgactgaagatgttatc
aacaaaacaacaatcatcactgatcactttgctctcactggtaaaactttagttagtgac
aatgaaacagaacctgctgtaaatcacacagaaaaagagatgatccagaatgtcactgtg
ctgactcagcatgttgctcctaaagagagaacccctgttccatcagcctcagctgatgtg
tcaggatctggttcagctgaactctcagccagcggggagacctccagagagtcttcctcc
tccagctccagtggtgatgtgtctgggtcgggagagggtgtcatcctcaaagaatccaca
gacgttttctctggagagcagtctgcctctaaaatgcaggaggctagaggcgaaagggtg
gatagcttcacatctggagatttgggaagtgcatctgcatctggatctgaatctggatct
ggatctggatcttcatctgcatctggatctgaatctggatctgaatctgcatctggatct
gaatctggatttggatctagatctgcatctggatctgaatctgcatctgcatctgcatct
ggatctgaatctgcatctggatctgaatctggatttggatctggatctgcatctgaatct
gcatctgcatctggatctggatctgccttcattatctcaggatcaggatttggcagtgga
agtgcatacatcagtggtagtggtgaagacccaacaatcatcattgtaaatggagaaatg
gaggaagtgtccaaaactcaccaaaacaacacagagcaggaatttggccgtggacatgtt
gatttcagtggagactttaaagaatcaagtggctccgggtctggtgaagtgtccacgtcg
ggtgatgtttctgggtccggtaacgtttctggattgggtgatgtttcaggttctggctcc
agtggacttcctggcattttatatatcgaccacagtggcactgacctgacagagcagcaa
tctggagaacaagaggtttctgggtatcatccagttggatcagggggccacagcggtttc
tccagtggagttccacatggagtttctagcagtgtttctgcttctggagaccccttccat
ttaagtggtgatgtcatctacataactgatgacaggacattcaaagtgactgaagtaagg
gaacctgagcagggccgtggtgtggttgaagtgagcggggaagggagttcctcaggagtc
tttcatgaattcagcagcactttgagtacatcaggaactgaagctgcccgtgaaacactt
gctgctacaatgccatatacagagtccatcagtgctgctgcccaatcagaagtcagagcg
accgatcaggatggttacacaggaccttcggattttgccgtgactccagagttggcctac
aatagcccaccaacagttccatcaatgctgttagctactccagctgttgtagagcagcct
gatgtggatgaagctctccacggctgtcccaatggttggagggagtttcgggatggctgt
tacatccatattgataacagagatacgtggtctgaagctgagcattactgtcagcagctg
aacgcccacctggtcagcatcaactcccaggaggagcaggaatttgtcaacttgagtggc
caggattaccagtggattggactcaatgacaaagatgtgcagaatgagttccgctggact
gacggaaatcctctgtcttatgtgaactggaggcccaaccagccagataactatttgaat
tctggggaggattgtgtggtgatgatctggcaagagggtgggcagtggaatgatgtgccc
tgcaactaccaccttccatacacctgcaagatgaatcctgtaatgtgcggatcacccccc
aatgtggaacacggccagcccatgggcagcagtcgagaacactacgctgtcgactccatt
gtccgctaccagtgtgatgcaggctacacacagcgccacctacctgtcatacgctgcatg
gagaacggggagtggcaaaagcctcaggtggagtgcctagaagctaatgccaacagtcag
cggctacacaaaaggtccctgtggaggagaagtaaaggtgtcaacagccagcaggagcag
aggaaacagcactga
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