Nothobranchius furzeri (turquoise killifish): 107388434
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Entry
107388434 CDS
T05163
Name
(RefSeq) PDZ and LIM domain protein 3-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107388434
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
107388434
Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107388434
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
107388434
NCBI-ProteinID:
XP_015819452
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All DBs
Position
sgr02:complement(19844655..19845258)
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AA seq
315 aa
AA seq
DB search
MPVNVVLDGPPPWGFRLTGGKDFNQPLTISRITPGSKASIANLCAGDQILAIEGVPAINM
LHCEAQSKIKESTSQLCLTVERNESRLWTPRVIEDGRAHPFKLNLEAEQQELKPIGTAHN
RRAQPFVAAANIDDKRQVVSTSYNTPIGLYSSGNIQDAMEGQIRGLVPHKPDSPRTLSSI
EESDVYRMLQKDQEDPQEPRQSGSFKALQEFIDSDGTPPIVTRTVKAPTTKSTPPTGNLQ
KLPMCDKCGNGIVGTVVKARDKYYHPGCFVCSDCDVNLKQKGYFFVEGQLFCELHARARM
RPPEGHDLVTAFPSA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaaatgttgtgttggatgggcccccaccctggggtttccgcctgactggagga
aaggacttcaaccagcccctgaccatctccaggatcactcctggcagtaaagcatccatt
gccaacttgtgtgcgggagaccagatcctggccatagagggcgtccctgccatcaacatg
ctgcactgtgaagcccagagcaagattaaagaatccaccagtcagctctgtctcaccgtg
gagaggaatgaatccagactgtggactccacgtgtgatcgaagatggcagagctcacccg
tttaaactaaacctagaagcagagcagcaggagctcaagccgatcggcaccgcccacaac
cgacgagctcagccgtttgtcgcggctgcaaacatcgatgacaagcgtcaggtggtgagc
acgtcctacaacacgcccattggtctctactcctcgggcaacatccaggatgccatggag
ggacaaattcgaggcctggttccacacaaacctgacagtcccaggactctgagcagcatc
gaggagtctgatgtgtaccggatgttacagaaagatcaggaggacccccaggagccccgg
cagtctggttccttcaaagccctgcaggagtttatcgacagtgatggcactccgcccatt
gtgactcgaacagtgaaagccccaacgacaaaatcaactccacctacaggaaacctgcaa
aaactgcccatgtgtgacaagtgtgggaatgggattgttgggacggtggtgaaagctcgg
gacaaatattatcaccctggctgcttcgtgtgctccgactgtgacgtcaacctgaaacag
aagggctacttctttgtggaggggcagctgttctgtgagctccacgcccgagccagaatg
agaccaccggaggggcacgacctcgtgacggcgtttccttctgcgtag
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