Nothobranchius furzeri (turquoise killifish): 107388630
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Entry
107388630 CDS
T05163
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107388630
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Other basic domains
RF-X
107388630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
107388630
NCBI-ProteinID:
XP_015819719
UniProt:
A0A1A8B0E4
LinkDB
All DBs
Position
sgr13:18475289..18489451
Genome browser
AA seq
1447 aa
AA seq
DB search
MADDQQQQPGQKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDSILQDVEK
FTDIEKLYLYLKLPSGPSSGNDKSDQSSMSSSRTQQMYAFNWIRNHLEEHPETSLPKQEV
YDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKKAFVHMPS
LPNLDLQKSGDGCELMESSGQSPSAEDEMRSAACGLVCEWAQKVLSRQFDNVEDLARFLL
NSHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTAEANSFQPQVKTLPSPSVDAKQQLQ
RKIHKKQQEQKLHSPLPTEAQVKRTEASTPGPTIPCGSPALLSPQPTIGIVVAAVPSPVT
VQRSRQLMTSPSPVGTAEGKVLPVNFQVVTQTLKQSPKTPQNVPASPVGDRLARHGTRYA
QILPKPSATSAITLRSPPTLLITNSPIKTVMPTPHVSSVNVVKMTAIALAPNSSSTTVRP
ASAGVSVMAASDDSQQMQSGNLATPQSPAIRPNTAASTLILSADTKGLSEPGSDNSSAEK
LIGGAKEDRVAKFRAASEPSFLIKCSPGQEKGVRMKGDSTPTSVAGILDSNNSNCHDSTL
YLTVDNQNSNGNTSSNGSSAVTPTSKDPCLDSKSPRKRAAVESHAIPVKRVFISQQPLAV
VDNPKPGVSAAMKRVPRPGTPARPESAPCKGTAKHTPTGPTQILALTDAPLTHTEGTQTV
VKQQDLGLKHKDPSISIDTTVGLAESNTSDQALLQQITGDPRAIPANSGPHEASVSELKS
TIWEMQQIPAEHKQASSDQLSMITQPSEASGQLTLTQEMVDFAGSQPNMDYFPFNDDDMT
QDSIVEELVQMEEQMKLKGLFGNCVDVSLQGQSTNSQSSILSAHQASSTFYHSAHSSTTP
VQTPTPTPTPTPTPTPTSEMTLTHTLTRESPCSRMAPITPVDGAMGRHTPISTPLSNCSS
SVPPSPVECRNPFAFTPINSSITGYHDASIVSSSPVKPMQRPMATHPDKAKLEWINNRYN
STAAGPLSNHSIGILPSYQDLVDDQFRKPHAFAIPGQSFQSQSRPDAAHFGRLTPISPVQ
QQVTGVTTPTKQESFAVPAPLDNKASTSSTSSTFRCRSVSPAVRQRNSSGNTGPPTTTTS
TATTARAVISPFNSPITSEVLSILSNSQAVSSVHSMVQRSQSVPLTIMMQSEMLPVQGQS
NASKITNVLLSKMEADGDESVRGLGINNLPSNYTARMNLTQILETTPSFAGGTAHQAQLP
VSSSPAAFELQQHGFLTTGSGEQVSFSAGDNQAQVGPGEQDQQQQLQEDPVQTQPQLLLQ
STQQQEVEDEQQQIDFNNTVKDLLGEDSLNPSSQLVGQVASELNAVASDFSNDIRLTSDL
SSSITDLNTLDPNLLFDPNQQQEQYEDSTLEELKNDPLFQQICSDTVNSGFDWLESKDQP
TTVEMLG
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaacaacctggtcagaagcctgcctcgggattaggctctctt
ccagcgctggtgccaggactacaagggcccgaggctaacgcgctacagttcaaaataaag
aattcaatttgcaaatctgtacaatcaaaagtggacagcatattgcaagatgttgagaag
tttacagacatcgaaaaactctacctctaccttaagttgccttctggtcccagcagtggc
aatgataaaagtgatcagagttccatgtcgtcaagccgtactcaacagatgtatgcattc
aactggatacgcaatcacctagaagagcacccagagacgtccctcccaaagcaagaggtg
tatgatgaatacaagagctactgtgacaatcttggctacaatcctctgagtgctgcagac
tttgggaagatcatgaagaatgtttttcccaacatgaaggcacgccgtctgggcatgagg
ggcaaatccaagtactgttacagcgggttaagaaagaaagcttttgttcacatgccatcc
ttacccaacctggatctgcagaagtctggtgatgggtgtgagctgatggagtcgtcgggc
cagtctccgagcgctgaggatgaaatgagatctgcagcgtgtggactggtgtgtgagtgg
gctcaaaaggtcctgagtcgtcagtttgacaacgtggaggacctggctcgcttcctgctc
aatagtcactacattggtacaaagtccatggctgcacttactgttatgactggaacaccc
acaggaatgaagaccccgactccagcctctgccttcgtgcccacggctgaggcaaactca
ttccagccccaggtgaagaccctgccctctccctctgttgatgcaaagcagcagttgcaa
cgtaaaatccataaaaagcagcaggagcagaagctccactcccccctgcctacagaggcc
caggtgaagcgaactgaggccagtacccccggacccaccatcccttgcggcagccctgct
ctgctctcccctcagcccaccataggaattgttgtagcagctgttcccagcccagtcacg
gtacagaggagcaggcagttgatgacctcccctagccctgtagggacagcagaaggaaaa
gtgttgcctgtgaatttccaagttgtcactcagactctcaaacagtctcctaaaaccccc
cagaatgttccagccagtcctgtaggagaccggcttgcccgacacggaacgcggtacgcc
cagatactgcccaagccctctgccactagtgccatcacgctgcgctctccccccactctg
ctcatcaccaacagccccataaaaaccgtgatgcccactccccacgtcagctcggtaaac
gttgtgaagatgacggccatcgctctggctcccaacagcagcagcacaactgtgcgacca
gcctcagccggcgtgagtgttatggctgcttcagatgattcccagcagatgcaaagtgga
aatttagccacccctcagtctcctgctatcagacccaacacagcagcatccaccctgatc
ctctctgcagacaccaaagggttgtctgaacctggaagtgacaactctagtgcagagaaa
cttatcggtggcgccaaagaggacagagtggccaagttcagggctgcaagtgagccaagc
ttccttatcaagtgttctccaggacaagaaaagggggtgagaatgaaaggtgactcaact
cccacctctgtagctgggattctggacagcaataacagtaactgccatgacagtactttg
tacttgactgttgataatcagaactccaatggcaacacatcgtctaatggctcgtctgct
gttaccccaacatccaaggatccctgcttggattccaagagccccaggaagcgtgcagct
gttgagtcccacgccatccctgttaagagggtgtttatctcccagcaaccacttgctgtc
gttgacaatcccaaacctggggtcagtgctgcaatgaagagggttcccagaccaggaact
cctgccagaccagagagtgccccctgcaaagggactgcgaaacacacaccaacagggccc
acacagatccttgcacttacggacgcgcctctcacacacacagaaggaacgcaaacggtc
gtgaaacagcaggatttggggttgaaacacaaagacccttccatcagcatcgataccacc
gttggactagccgaaagcaacacgtctgatcaggcacttctgcagcagatcaccggagac
cctcgtgcgataccagccaactcaggaccacacgaagcctctgtgagcgagttaaagagc
acaatatgggagatgcagcaaataccagcagaacacaagcaagcctcctccgaccagcta
tccatgataactcaaccttctgaggcctcaggccagctcactctcacgcaggagatggtg
gactttgcaggatctcagcccaacatggactatttccccttcaacgatgatgacatgacc
caggacagcatagtggaggaactggttcaaatggaggagcagatgaagctgaagggtctg
tttggtaattgcgttgacgtgtccctccagggtcagtcaactaacagtcagagctccatc
ctcagtgctcatcaagccagttctaccttttaccactctgcccacagcagcaccacacct
gttcaaacccccacgccgacaccaacaccaaccccaacacccacgcccacttcagaaatg
acgctcacgcacaccctgacgagggagagcccttgctctcgcatggcccccatcacacct
gtggatggagccatgggtcgtcacacccccatcagtacaccgctgtcaaactgcagcagc
agcgtgcccccgagcccagtggagtgcaggaacccttttgctttcacacccattaactcc
agcatcacggggtatcatgatgccagtattgtttccagtagtcccgttaaacccatgcag
aggcccatggctacacatcctgacaaggccaagctggagtggatcaacaaccgctacaac
agcaccgccgctggtcctttgtccaaccatagcataggcattctaccaagctaccaggac
ctggtagacgatcagtttcgtaaacctcatgcgtttgcgattcctggccagtcctttcag
tctcagtcgaggccggatgctgctcacttcggccgattgacgcccatttctccagttcag
cagcaggtaacaggtgtaaccactcccaccaaacaagagagtttcgctgtgccggcgccg
ttggataacaaggcttcaacctcatccacatccagtacctttcgttgccgcagcgttagc
cctgccgtacggcagaggaactccagtggcaacaccggtcctccgaccaccaccacaagc
actgcaacaacagctagagctgtgatctcaccctttaactcccccatcacttctgaagtg
ctcagtatactgtccaacagccaggcagtcagctccgtccacagcatggtgcagcgtagt
cagtctgtaccgctgaccatcatgatgcagagtgagatgctgcctgtgcaaggtcagagt
aacgcatctaagatcactaatgttctgctcagcaagatggaagctgatggagacgaatct
gttcgcggcctgggcatcaacaacctcccctccaactacacggcccgcatgaacctcact
cagatcctggagaccacgccaagcttcgcaggcggaacagctcaccaagctcagctgcct
gtcagctccagccctgctgcctttgagctccagcagcacggcttcctcaccactggcagt
ggagagcaggtgagcttttctgctggggacaaccaagcacaagtaggtcctggggagcaa
gaccagcagcagcagctccaagaggatcctgtgcagacacaaccacagctcctcctccag
agcacacagcagcaggaggtggaggatgagcagcagcagattgatttcaacaacactgtc
aaagacttgctgggggaggacagcctcaaccccagttcccagttggttggtcaggtagct
tcagagctcaacgctgtggcctctgacttctcaaatgacatcagactgacctcagatctg
tccagtagcatcactgaccttaacacattggaccccaacttgctatttgatcccaaccag
cagcaggaacaatatgaagactcgacactggaagaactgaagaacgacccgctttttcag
cagatatgcagtgatactgtgaactctggtttcgactggctagagagcaaagaccagcct
accacagtagagatgctgggttaa
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