Nothobranchius furzeri (turquoise killifish): 107388634
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Entry
107388634 CDS
T05163
Symbol
myo5a
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107388634 (myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107388634 (myo5a)
04131 Membrane trafficking [BR:
nfu04131
]
107388634 (myo5a)
03029 Mitochondrial biogenesis [BR:
nfu03029
]
107388634 (myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107388634 (myo5a)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107388634 (myo5a)
mRNA cycle factors
P-body specific factors
107388634 (myo5a)
Membrane trafficking [BR:
nfu04131
]
Others
Actin-binding proteins
Myosins
107388634 (myo5a)
Mitochondrial biogenesis [BR:
nfu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107388634 (myo5a)
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107388634 (myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
AAA_16
Myosin_N
Motif
Other DBs
NCBI-GeneID:
107388634
NCBI-ProteinID:
XP_015819722
UniProt:
A0A9D3BYX6
LinkDB
All DBs
Position
sgr13:18519214..18539410
Genome browser
AA seq
1819 aa
AA seq
DB search
MAASELYSKNARVWLPDAAEVWKSAELLKDYTPGDLTLSLQLEDGTKVQHKIDPQTKNLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFTDSRLIYTYCGIVLVAINPYESLPIYE
ADIINAYSGQNMGDMDPHIFAVAEEAYMQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVSSSSGEANVEDRVLASNPIMEAFGNAKTTRNDNSSRFGKYIEIGFDKKLCIIGANMR
TYLLEKSRVVFQAHGERNYHIFYQLCASSHLPEFKAFKLGCADDFCCTNQGESLVIDGVN
DAKDLCSTRRAFTILGVDESNQMDIYQILSAVLHLSNVDVKEESADRCSVLPDDAHLVVF
CELVGVPCGEMAHWLCHRKLKTASETFVKSVSKINAIHGRDALAKHIYAKLFSWIVSSIN
SALKSSEKQHSFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
EIPWTLIDFYDNQPCINLIEARMGILDLLDEECKMPKGSDDTWAQKLYNTLLKQNAHFDK
PRLSNRAFIILHFADKVEYQCVGFLEKNKDTVNEEQINVLKKSKFNLLLKLCEEEDKATA
STSRLSSIIGKVGQTLRETKKTVGMQFRQSLQLLMDTLNATTPHYVRCIKPNDLKAPFTL
DPVRAVQQLRACGVLETIRISAAGFPSRWTYQEFFNRYRVLIRHKEMLPDRKQTCRNLLE
KLIKNQEKYQFGKNKIFFRAGQVAYLEKLRSDKLRSACVRIQKTIRCWLARRKYLRKREC
AIIIQKHVRGHQARRYAMFVRQTRAAVVIQRNVRMWARRRSFLQQRSAAITIQCSWRTHM
ARKQYYKLLYEHKAVIIQKWGRRWLAKHRYKRALSDIVLLQSCVRRMRARRELKKLKVEA
RSVEHFKKLNVGMENKIMQLQLKINKQSKDNQELSERLSVQERTHTTETDRQSREIENLR
RSEQEARTKAETVPSLLERLSFLQHELENTRREKEDLEEQIQIDKEQTQWVIEELNIKNN
FLSSNVDELNLKVSEQAQQLADIKSSSESSGQLEKELTEERSRYQSLLSEHLQLEERLKD
LKEEMSLNIDSNKSSHKRTDSNYSSNYSEFSQSLISAEGEDSSIQTEDESMSKVDLPILL
KLQRRVKELEEENRSLWQQLDKREEAQQEKEVEEQKTVGTTELDLEKIKRHELESENKKL
KQDLNELRKSLTSETRELAPPAPGSAPYNLLLEQLNSSNEELEMRKEEVLLLRSHMVRQE
ALKHRDSVFREGVKLELNEIPSLQDHERSSNIHTLNEDGELWLAYEGLKETNRLLECQMQ
EQERLHNESNGKLVEEMNKLRAEKEQQQKLLDQSLLLPEDARVDAALKHEITRLTSENLE
RMEQQEHQDKIVRKLKKQLKLYMKKVEEYEASSQQMNTSSVMSTPIRPVNIPRKEKEFQG
MLEFKEGDTTRLFKNLIIDLKPRGAAVNFTPGLPAYILFMCLRYVDNVNDDKRVISLLNS
TISSIKGVIKRKGNDLEVVSFWLANTCRLMHCLKQYSGLEVFVTQNTAKQNEQCLVNFEL
SEYHQVLGDLAIQIYRQLIKCMENIILPIIVAGMLEHETIQGVLGSKPTGLRKRSSSFHE
EAVTVEVLLQRLTFFHTTMSQHGMDSDLIKQVVKQQYYIICAVTLNHLLLRKDMCSWSKG
LQIRYNVWQLEEWLTERELSNCGAKETLEPLIEAAQLLQIKKKTDADAQAICSMCTALTT
AQIIKILTLYTPVIEFEERVSTTFIATIKSLLKDKNTSSTLTMDAKKIFSVVFPFTPSSV
ALETLQIPASLNLGFLTRI
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctctgaactttactccaagaatgcccgtgtgtggctcccagatgcagcagaa
gtgtggaaatcagcagagcttctcaaagattacactccaggtgacctgacactgtctcta
cagctggaagatggcacgaaagtgcaacataaaattgacccacagaccaagaacctaccc
cctctcagaaaccctgacatcctggtgggggaaaatgacctcacagcgctcagctacctt
catgagccagcagtgctgcacaaccttaaagtccgctttactgactccaggctgatttac
acctactgtggaattgtcctggttgccatcaatccttacgagagcctgcccatctacgaa
gctgacatcatcaatgcatacagtgggcagaacatgggggatatggacccccacatattc
gcagtagctgaggaggcgtacatgcagatggccagagatgaaaaaaatcaatctatcata
gtaagtggtgagtctggagctgggaaaacggtgtcagctaagtacgcgatgcgttacttt
gccacagtcagcagctcctctggggaagccaatgtagaggatcgagttctcgcatccaat
cccatcatggaggcctttgggaatgccaagacaacgaggaatgacaacagcagtcgcttt
gggaagtacatagagattggatttgacaagaagctctgtatcattggtgccaacatgaga
acttacttactggaaaagtccagagttgtgtttcaggcccatggagaaagaaactaccat
atattttatcaattgtgtgcctcctctcatctaccagagttcaaagccttcaagttaggt
tgtgcagatgacttctgctgcaccaaccagggtgagagtctagtcatagatggagttaat
gatgccaaagacttgtgcagcaccaggagggcattcacaatattaggagttgatgaaagt
aaccaaatggacatttatcagattctgtcagcagttctccatctgagcaatgtggatgtg
aaggaggagtctgcagatagatgcagcgttctgccagacgatgcccacctggtcgttttc
tgtgagctcgtgggggtgccttgtggagaaatggcacattggttatgtcacaggaagctc
aaaacagcctcagaaaccttcgttaagtctgtttccaaaataaatgcgatccacggccgg
gacgctttagccaaacacatttatgccaaactcttcagctggattgtgagcagcattaac
agcgccttaaagtcatcagagaagcaacactcctttattggtgttcttgacatttatggg
tttgaaacatttgacatcaacagctttgaacagttttgtatcaactatgccaacgagaaa
ctccagcagcagttcaatctgcatgtgttcaagttggagcaggaggagtacatgaaagag
gagatcccttggacactgattgacttttatgacaaccagccttgcatcaacctcatcgag
gccagaatgggcatcctggaccttctggatgaggagtgcaaaatgcccaaagggtcagac
gacacatgggctcagaaactgtacaacaccctgctgaagcagaacgctcactttgataaa
cccaggttatcaaacagggccttcatcatcctccactttgctgacaaggtggagtaccag
tgtgtgggcttcttggagaaaaacaaggacacagttaacgaggaacagatcaatgtgctg
aaaaagagcaagtttaatttgctgctaaagctgtgtgaggaggaagacaaagcaacagct
tctaccagcaggttatccagcatcattggaaaagttgggcagactctaagggaaaccaag
aagactgttggtatgcagtttcgacagtcacttcagttactgatggatacacttaatgct
acaacacctcactacgtacgttgcatcaaaccaaatgaccttaaagccccgttcaccttg
gaccctgtgagggctgtgcagcagcttcgtgcttgtggtgtcctggaaacgattcggatc
tcagctgcaggcttcccatctagatggacctatcaggagttcttcaatcgttaccgtgtc
ctcataagacacaaagaaatgcttcctgacaggaaacaaacctgcagaaatctcctagag
aaacttataaagaatcaagagaagtaccagtttggcaaaaacaagatcttcttcagggct
ggtcaggtggcttacttagagaagctccgctctgacaaattacgttcagcttgtgttcgc
atccagaagacgatccgctgctggctcgcccgcagaaagtatctaaggaagagagaatgt
gccatcatcatccagaaacatgttcggggtcatcaagcacgcaggtacgccatgtttgtg
cgtcagaccagagcagctgttgttattcagcgtaatgttcggatgtgggcgaggaggaga
agtttcctgcagcagcgctctgctgctatcactatccagtgttcctggaggactcacatg
gctagaaagcagtactataagttgctgtacgagcacaaagcagtgatcattcagaagtgg
gggagacgctggctggccaagcatcgctacaaacgtgcgctatcggacatcgttctgctg
cagagttgtgtgcgccgcatgagggccaggagagaactgaagaagctgaaagtggaggca
cgctcagtggagcacttcaagaaactcaatgtaggcatggagaacaagatcatgcagctg
cagctcaagataaacaagcagagtaaagacaaccaagagctcagtgagaggctgagtgtc
caggagaggacccacaccactgagacagacagacagagcagagagatagaaaacctacgc
agatcggagcaggaggccagaaccaaagcagagacggttccctctctgctggaacggctc
tccttccttcagcatgagctggaaaacacccgcagagagaaggaggacctggaggagcag
atacagattgacaaggagcaaacacaatgggtgatagaggagcttaatataaagaacaac
ttccttagcagcaacgttgatgaactgaacctaaaagtctctgaacaagctcagcagtta
gcagatattaaatccagctctgagagcagcggacagctggagaaggagctgactgaggag
cgttctcgctaccaaagcctgctgagtgaacacctgcaactagaggaacgactcaaagac
ctgaaagaagagatgagtctcaatattgattcaaacaaatctagtcacaaacggacagac
tccaactacagcagtaactattctgagttttctcagagtttaatctctgctgaaggagag
gacagttccattcaaacagaggatgaaagcatgtctaaagtggacctgccaatcctcctc
aagcttcagagaagggtaaaggaactagaggaggaaaatcgatcactttggcagcagctg
gataaaagagaagaagctcaacaggaaaaggaggtggaggagcaaaaaactgttggcaca
acagaactggacttagaaaagataaagcgacacgaacttgagtctgagaacaagaaactg
aaacaggatctaaatgagcttcgaaagtccctcaccagtgagaccagggagttagcacct
cctgctcctggttcagcgccctacaaccttttactagagcagctcaattcctccaatgag
gagctggagatgagaaaagaggaggtgctgctcctccgctcacacatggtccgtcaagaa
gctctaaaacacagggattctgtatttagagaaggtgtgaagttggaactgaatgaaatt
ccttcattgcaggatcatgaaaggtcctctaacattcatacactgaatgaagatggagag
ctgtggttggcttatgagggtttgaaagagacaaacagacttctggagtgtcagatgcag
gagcaggagcgtcttcacaatgaatcaaacgggaagcttgtggaggagatgaacaaactg
agggctgagaaggagcagcagcagaagctgttggatcaaagcctccttctgcccgaggac
gcccgggtcgatgcagccctgaagcacgagatcacacgtctcacctctgagaacctggaa
cgaatggagcaacaggaacatcaggacaaaatcgtacgcaaattaaaaaaacagcttaaa
ttgtacatgaagaaggtggaagaatatgaagcgagttctcagcagatgaatacttcctct
gtgatgagcactcccatcaggccggtgaacattccccgtaaggagaaggagttccagggt
atgttggagttcaaggaaggagacacaacccgcttgttcaagaatctgatcatagatctg
aagcctcgtggtgcagcagtcaactttaccccagggcttcctgcctacatcctcttcatg
tgcctccgttatgtagacaatgtgaatgacgacaagagagtcatctctctcctgaactcc
accatcagcagcatcaaaggggtcataaagaggaaaggaaacgatttggaggtggtttca
ttctggctggctaacacatgcaggttgatgcactgtctgaagcagtacagtggattagag
gtctttgtgacacaaaatacagctaagcagaatgagcagtgcctggttaactttgagctg
tcagagtaccatcaggttttgggagatttggccatccagatttaccgtcagctcatcaaa
tgcatggagaacatcatcctgcccatcattgtggcaggcatgctggagcacgagacgata
caaggagttctagggtccaaacccacaggcctgaggaagaggagctccagtttccacgag
gaggccgtgactgtggaggtcctcctgcagcgcctgaccttctttcacaccaccatgagt
caacacgggatggactcggacctcatcaaacaggtggtcaagcagcagtattacatcatc
tgtgctgtcactttgaaccacctgctgctgcggaaggacatgtgctcgtggagtaaaggc
ctacagatcaggtacaatgtttggcagctggaggaatggctgacggagcgggagctgagt
aattgtggtgcaaaggagactttggagcctctgattgaggctgctcagcttctacagatc
aagaaaaagactgatgcagacgcccaagccatctgcagcatgtgcactgccctcaccaca
gcacagattattaaaatcttgaccttgtacacgccggtgattgagtttgaagagcgggtc
tccaccaccttcatcgcaactattaaaagtctgttaaaagacaagaacacgtcttccacc
ttaacaatggacgccaagaaaatcttctcggttgtgttcccattcacgccttcctccgtc
gctctggagacccttcagatccccgctagccttaatctgggattccttacacgcatctag
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integrated database retrieval system
