Nothobranchius furzeri (turquoise killifish): 107388668
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Entry
107388668 CDS
T05163
Symbol
hps5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107388668 (hps5)
Membrane trafficking [BR:
nfu04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
107388668 (hps5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_HPS5
TPR_HPS5
PEP5_VPS11_N
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_Vps41
Beta-prop_RIG_1st
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
DUF6604
Motif
Other DBs
NCBI-GeneID:
107388668
NCBI-ProteinID:
XP_015819776
UniProt:
A0A8C6Q3Y7
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Position
sgr13:19087536..19097792
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AA seq
1109 aa
AA seq
DB search
MPSIPAVPENHSLVLAEFDCLDPLLSALRLDSGRLKCTCLAVSRKWLALGTSAGGLHLIQ
KEGWKQRLILTHKEGSITQVACCPHDEDFIAVTTSQGLVVVWELQLERRGRPERVSFSWE
HRGQNITSLCWDTSSLRVFAGDSGGKVSYLRAGSSKLGKGSTFVIFPVQTVTTVDSRVVQ
LGYQDGRLLVSSLSRCYLCDTEKEKFWRVGNKERDGEYGACFFPQNRGLLVGQPPLLYCA
RPGSRIWEASFTGEVLSTHQFKQLLACPPLPLITYRNEPNYNPAQKSPQSLAFPKLLYFG
DQNLLTWTDSAVYIFTPQNGQVLLWTEVKDLVDVAVHRSELFCLHGSGRLSHLSLLPAER
CVERLLRRESWTLAAAVCCMFQHAVASSRARKCVPLDRLEHLKAQLSSRTHPELINQLEE
VMAKLEPLDSASSSRRSSISSHESFNVLDCGIYRVISRRGSQSDEETSSLVNHSTSEEER
LKEFSFMQEEDQVDHDPQSSERVEADRSEQGLQFHLPLSFRPKPPRIALQAVKDSVSSFV
KKTTEKINTLQMNSELRQQPEYKECRQMDAVSNVTLYSEETENEEVSNPEADMQELRTAT
EKAVSQIQDPLVLLEPVCLREALLEWLVVLERVLGPADLGSAPAADSNLDGSGEDRWEQD
YLHPCSDHQEPAEVVPEETKDAPEPGGKQVQCENKRTTDSDTVAPCGNPPEPVRVVSPTP
IPSDLSADLTELASLYTEMSCFRNQKEVLGCSAFLRRYFFLLDQERVRRMCLLCHRVQPD
MMSSFIEAMLELTQSSKVVEIIQKGDLLKSLRSLRELQAWGAPHLLVHLHRLYEKHGEAA
VRSFSQFYPTITPADVITMAQQSHFLPYLDNLVQSRAEEHRLSFLQSLLEPESLRQDWLE
LALTHDAPKNCDTLTPDGQPRWHSHCFSWGYGRLLSLLIRLPADFSSKEKMCETCRSHGY
WTGYLYLCKELQRRTEAFSSICELDDISLLEEPDGVEPQTLDEWKALIQLSHHHCSVAES
QQVTNGSSLTNGSAEREGKISPESLSLMLARSAGPDRALAVLEECGVQLALSPQSELVCE
LLRVAEKRQRAIIQTMLERCDRFLWSQHA
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgataccagctgttccagagaaccacagccttgtcctggcagagttcgactgc
ctggatccgcttctttctgctctgcgtttggactcaggacggctcaagtgtacctgtctg
gccgtttcaaggaagtggcttgcattagggacatcagctggaggactgcacctgattcag
aaggagggctggaaacaaagactcatcctcactcacaaggagggatcgatcactcaggtg
gcatgttgccctcatgatgaagatttcattgcagttacaacaagtcagggtctggtggtg
gtgtgggagctgcagctggagcgacgcggtcgcccagagcgagtcagcttctcctgggag
cacagaggtcaaaacatcacatcgctgtgctgggacaccagctcgctcagggtttttgcc
ggggattctggaggcaaagtgtcatatctacgagcaggatcctccaaattgggcaagggg
tcaacgtttgtgatcttccccgtgcagacagtcaccactgtcgactccagagtggttcag
cttggataccaagatggccgccttcttgtgtcttctctgagtcgctgttacctctgtgac
acagagaaggagaaattctggcgagttgggaacaaggagcgtgacggcgaatacggtgcc
tgcttcttcccccagaacagggggttgttggtgggccagcccccgctgctgtactgcgcc
cggccgggctctcggatatgggaggccagttttaccggcgaggttctgagcactcatcag
ttcaagcagctactggcgtgtcctcctctacctctcatcacatacagaaatgagccaaat
tacaatccagcgcagaagagcccacagtctctggcctttcctaaacttctgtattttgga
gaccagaacctgctgacttggactgattcagccgtttatatctttacacctcagaatgga
caagttctgctgtggacagaagttaaagacttggtcgatgtcgctgtccaccgaagtgag
ctgttctgtctccatggtagcgggcgtctgtcccatctgtccctgctgcccgcagagcgc
tgtgttgagcggctgctgcgaagagagtcttggactctcgcggctgcagtctgctgcatg
tttcagcacgccgtcgcctccagtagggccaggaagtgcgttcctcttgaccgccttgag
cacctgaaggcccagctcagctcccgcacacacccagaactgatcaaccagctggaggaa
gtcatggcaaagctggagccgctggactctgcatccagcagccggagaagcagcatctct
tcacacgagagcttcaacgtcctggactgtggaatctatcgagtgatcagccgccgggga
agccagtcggacgaggagacgagctccctcgtcaaccattccacgtcagaggaggagcgg
ctcaaggagttcagcttcatgcaggaggaagatcaagtggatcatgatccacagagcagc
gagcgcgtggaggctgatcgctctgaacagggcctgcagtttcacctcccactctcattc
cgccccaaacccccccgcatcgccctgcaggccgtcaaagacagtgtttctagtttcgtc
aagaagacaacagaaaagatcaacaccctccagatgaactctgaacttcggcagcaacct
gaatacaaagagtgtcgacaaatggacgccgtctccaacgtgactttgtactcagaggaa
acggagaacgaggaggtatcgaacccagaggctgacatgcaggaacttcggacagcaaca
gagaaagccgtctcacagatacaagatcctttggtgctacttgaaccagtttgccttaga
gaagctctgctggagtggctggtggtgctggagcgtgtactaggacctgctgatctcggg
tcagctcccgcagctgattcaaacctggatggatcaggagaggaccggtgggagcaggat
taccttcacccctgctcagaccatcaagaacctgcagaggttgttccagaagagaccaaa
gatgctcctgagccgggaggaaaacaagtccagtgtgagaacaagaggacgacagactct
gacactgttgctccatgtgggaatcctccagaaccagtcagagtggtgtcccctacaccc
atcccatcagatctgtcagctgatctcaccgagctggcctcactctacacagagatgagc
tgcttcaggaaccagaaggaagttctgggatgttcagccttcctgcgtcggtacttcttt
ctgctggaccaagaacgggtcagaagaatgtgtctgctgtgtcaccgggtacagcccgac
atgatgagctccttcatagaggccatgctggaactcactcagtccagcaaagtggtggag
attattcagaaaggcgacttgctgaaatctctgcggagtctgagagagctgcaggcctgg
ggtgctcctcacctcctggttcatctgcacaggctgtatgagaagcacggtgaagcagct
gttcgctcgttctcccagttctatcccaccatcactcctgccgatgtgatcaccatggct
cagcagagccacttcctgccatacctggataatctggtccagtccagagctgaagagcac
aggttgtcatttcttcagtctcttcttgaaccggagtcgctgagacaggattggctggag
ctggctctgactcacgatgctcctaaaaactgcgacactctgactcccgatggacagccc
aggtggcactcacactgctttagctggggttatggacgtcttttgtctttgctgattcgt
cttcctgctgacttctcatccaaggagaagatgtgtgaaacctgccgcagccacggatat
tggacgggttacctgtacttgtgcaaggagttgcagcgtcgcactgaagcgttctccagc
atctgtgagctggacgacatcagcctgctggaggaacctgatggtgttgaaccccagact
ctggatgagtggaaggccctgatccagctgtcccatcaccactgcagtgtggccgaatcc
cagcaggtgaccaatgggagcagcttgaccaatggctcagcggagcgtgaaggaaagatc
agcccagagagcctgtccctcatgttggctcggagcgccgggcctgaccgagccttggcg
gtgctggaggaatgtggggtgcagctggcgctttcaccccagtccgagctggtgtgtgag
ctgctgagagtcgctgagaagaggcagagggcgataatccagacgatgctggagcgctgt
gatcgtttcctctggtctcagcatgcctga
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