Nothobranchius furzeri (turquoise killifish): 107388670
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Entry
107388670 CDS
T05163
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03022
Basal transcription factors
nfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107388670 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
107388670 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107388670 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107388670 (gtf2h1)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107388670 (gtf2h1)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107388670 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
PH_SLA1
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
107388670
NCBI-ProteinID:
XP_015819781
UniProt:
A0A1A8ACZ0
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All DBs
Position
sgr13:19079256..19087482
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQKKQDGTLYLMAERIAWGPEGKDRFTVSHSYSDIRCQKISPDGK
AKVQLQLVLHTGESTTFHFANESTSRKDWEAAKELLQQLLPKFKKKANKELEEKNKMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLGGINNGESAACENKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYKENVPHNLTEKEFWTRFFQSHYFHRDRISTGTQ
DIFSECARQDEKGLKSLVTQGVKNPMVDLLSLEDKTLDEGYGISSALPSTSHASRTVKES
SNFAIIKRFNHHSAMVLAAGSRKRDVPADQASETSSTDGNSRDSDFFQPPLKKVKLQEAI
EYEDLQQENRPKTVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVNYIKHEMSNYKPNL
TQVLSSAAASSAIAALSPGGVLMQQVAQQAINQMVPTEIQAELKHLYVAAGELLRHFWTC
FPVNTAFLEEKVTKMKSNLERFQITKLRPFQEKIQRQYLSTNLTGHLECMLQAAYSKFHI
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctgtcagaggaagtgcttctggtggtgaagaaggttcgccagaagaagcag
gatggcacactgtatctgatggctgaaagaatagcctggggtccagaggggaaagatcga
ttcacagtcagccactcatactcagacatccgctgtcagaagatcagtcctgatggtaaa
gccaaagttcagcttcaactggtccttcacactggtgagagcaccacattccactttgcc
aatgaaagcacctcacgtaaagactgggaagctgccaaggaactgctgcagcagctactg
ccaaagtttaagaagaaagccaacaaggagctggaggagaaaaacaagatgcttcaagaa
gatcctgtgcttttccaactgtataaagatctcgtggtgagccaggtcatcagcgccgaa
gagttttgggccaacaggttaggaggcataaacaacggagaatctgcagcgtgcgaaaat
aaacaggaagtcggtatatctggagcgtttctggctgacatcagacctcagactgatggc
tgcaacgggctgagatataatctgaccgcggatattattgagtctatttttagaacatat
cctgcagtgaagcagaagtacaaagaaaacgtgccccataacttgacggagaaggagttc
tggactcgctttttccagtcccattattttcaccgagaccgcatcagcacaggaacgcag
gatatcttctcagaatgtgccaggcaggatgagaaagggttgaagtctctggtgacccaa
ggagtgaagaatccgatggttgacctcttgtcactggaggacaaaacactagatgagggt
tacggaatcagctcagctctgccatcaacctctcacgcaagcaggacagtaaaggagagc
agcaactttgctattataaagagatttaaccaccacagtgccatggtgctggcagcaggt
tcacgcaaaagggatgtgcccgccgaccaagccagtgagacaagcagcacagacggaaac
tccagggattctgacttctttcagcctcctctaaagaaagttaagttacaagaagccata
gaatatgaggatctgcaacaagaaaacagacccaaaacagtcgcgttaaacctgaagaag
tctgacaggtacgctcacggacctgtcccacttcagtcccaacagtacacaaccagccag
gacatcatcaactcggtcaactacatcaaacatgagatgtctaattacaaacccaacctc
actcaggtgttgtccagtgcagcagctagttctgctattgcagcactctctccaggaggt
gtcctcatgcagcaggttgcacaacaagccataaaccaaatggttcctactgaaattcaa
gctgagttgaaacacctttatgttgctgctggagagttattgagacacttctggacctgc
tttcctgtcaacacggcgtttttagaggagaaggtgacaaaaatgaagtcaaacctggag
agatttcagattaccaagcttcgtccttttcaggagaaaatccagcgtcagtacctaagt
acaaatcttacgggacacttggagtgcatgctgcaagccgcctatagcaagttccacatc
tggcaaacccgcaggatgatgaggaagacctga
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